The HRA Organ Gallery Affords Immersive Superpowers for Building and Exploring the Human Reference Atlas with Virtual Reality
0303 health sciences
03 medical and health sciences
Bioinformatics
Computer applications to medicine. Medical informatics
R858-859.7
virtual reality
informatics
interaction
data visualization
atlassing
information visualization
Article
DOI:
10.1101/2023.02.13.528002
Publication Date:
2023-02-15T16:25:46Z
AUTHORS (6)
ABSTRACT
The Human Reference Atlas (HRA, https://humanatlas.io ) funded by the NIH Biomolecular Program (HuBMAP, https://commonfund.nih.gov/hubmap and other projects engages 17 international consortia to create a spatial reference of healthy adult human body at single-cell resolution. specimen, biological structure, data that define HRA are disparate in nature benefit from visually explicit method integration. Virtual reality (VR) offers unique means enable users explore complex structures threedimensional (3D) immersive environment. On 2D desktop application, 3D spatiality real-world size organs atlas is hard understand. If viewed VR, tissue blocks mapped can be explored their true way goes beyond traditional user interfaces. Added visualizations then provide data-rich context. In this paper, we present Organ Gallery, VR application an integrated Presently, Gallery features 55 organs,1,203 292 demographically diverse donors 15 providers link 5,000+ datasets; it also prototype cell type distributions protein structures. We outline our plans support two use cases:
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