A5084940834- Genomics and Phylogenetic Studies
- Legionella and Acanthamoeba research
- Gene expression and cancer classification
- Microbial Community Ecology and Physiology
- Gut microbiota and health
- Water Treatment and Disinfection
- Microplastics and Plastic Pollution
- Magnetic and Electromagnetic Effects
- Dental Research and COVID-19
- biodegradable polymer synthesis and properties
- Electromagnetic Fields and Biological Effects
- Scientific Computing and Data Management
- Rough Sets and Fuzzy Logic
- Bioinformatics and Genomic Networks
- Recycling and Waste Management Techniques
- Microbial Metabolic Engineering and Bioproduction
- Chemical and Physical Studies
- Microbial bioremediation and biosurfactants
- Advanced Clustering Algorithms Research
- Legume Nitrogen Fixing Symbiosis
- Oral microbiology and periodontitis research
- Metabolomics and Mass Spectrometry Studies
- Cancer Genomics and Diagnostics
- Bacterial biofilms and quorum sensing
- Nosocomial Infections in ICU
Écologie et Biologie des Interactions
2015-2020
Centre National de la Recherche Scientifique
2016-2018
Université Clermont Auvergne
2017-2018
Université de Poitiers
2016-2017
Polyethylene (PE), one of the most prominent synthetic polymers used worldwide, is very poorly biodegradable in natural environment. Consequently, PE represents by itself more than half all plastic wastes. biodegradation achieved through combination abiotic and biotic processes. Several microorganisms have been shown to grow on surface materials, among which are species Rhodococcus genus, suggesting a potent ability these use, at least partly, as carbon source. However, them, if not all,...
With the ever-increasing volume of polymer wastes and their associated detrimental impacts on environment, plastic life cycle has drawn increasing attention. Here, eight commercial polymers selected from biodegradable to environmentally persistent materials, all formulated under a credit card format, were incubated in an outdoor compost evaluate fate over time profile microbial communities colonizing surfaces. After 450 days compost, samples colonized by multispecies biofilms, these latest...
Abstract We present Bioconda ( https://bioconda.github.io ), a distribution of bioinformatics software for the lightweight, multiplatform and language-agnostic package manager Conda. Currently, offers collection over 3000 packages, which is continuously maintained, updated, extended by growing global community more than 200 contributors. improves analysis reproducibility allowing users to define isolated environments with defined versions, all are easily installed managed without...
New generations of sequencing platforms coupled to numerous bioinformatics tools have led rapid technological progress in metagenomics and metatranscriptomics investigate complex microorganism communities. Nevertheless, a combination different bioinformatic remains necessary draw conclusions out microbiota studies. Modular user-friendly would greatly improve such studies.We therefore developed ASaiM, an Open-Source Galaxy-based framework dedicated data analyses. ASaiM provides extensive...
Electromagnetic field (EMF) treatment has proven to be effective against mineral scaling in water systems. Therefore, it should assessed for the of other deposits such as biofilms. In this study, a commercial device producing low-frequency EMF (1–10 kHz) was applied reactor fed with natural 45 days. The promoted concentration microorganisms suspension and limited amount sessile biofilm, determined by measurement total DNA, qPCR microscopy. structure bacterial community t-RFLP pyrosequencing...
Chemical disinfectants are widely advocated to reduce the microbial contamination in dental unit waterlines (DUWL). However, until now their efficacy has been poorly examined after long-term application. In this study, through quantitative PCR and high-throughput sequencing, both bacterial fungal communities were profiled from 8- 12-year-old DUWL treated with commonly used by European dentists. Water was collected tap water supplying units output exposure point of turbine handpiece following...
Abstract Background New generation of sequencing platforms coupled to numerous bioinformatics tools has led rapid technological progress in metagenomics and metatranscriptomics investigate complex microorganism communities. Nevertheless, a combination different bioinformatic remains necessary draw conclusions out microbiota studies. Modular user-friendly would greatly improve such Findings We therefore developed ASaiM, an Open-Source Galaxy-based framework dedicated data analyses. ASaiM...