Jiřı́ Kozelka

ORCID: 0000-0003-0250-1928
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Research Areas
  • Metal complexes synthesis and properties
  • DNA and Nucleic Acid Chemistry
  • Ferrocene Chemistry and Applications
  • Organometallic Complex Synthesis and Catalysis
  • Magnetism in coordination complexes
  • Crystallization and Solubility Studies
  • X-ray Diffraction in Crystallography
  • Advanced biosensing and bioanalysis techniques
  • Crystallography and molecular interactions
  • Protein Structure and Dynamics
  • RNA and protein synthesis mechanisms
  • Molecular spectroscopy and chirality
  • Spectroscopy and Quantum Chemical Studies
  • Advanced Chemical Physics Studies
  • Electron Spin Resonance Studies
  • Molecular Junctions and Nanostructures
  • Lanthanide and Transition Metal Complexes
  • Enzyme Structure and Function
  • Molecular Sensors and Ion Detection
  • HIV/AIDS drug development and treatment
  • Chemical Synthesis and Analysis
  • DNA Repair Mechanisms
  • Free Radicals and Antioxidants
  • Photochemistry and Electron Transfer Studies
  • Drug Transport and Resistance Mechanisms

Université Paris Cité
2009-2024

Inserm
2008-2024

Masaryk University
2010-2024

Institut National de la Transfusion Sanguine
2017-2019

Biologie Intégrée du Globule Rouge
2018-2019

Sorbonne Paris Cité
2017-2019

Laboratory of Excellence GR-Ex
2017-2019

Délégation Paris 7
2017

Centre National de la Recherche Scientifique
2005-2015

Délégation Paris 6
2015

Lone-pair–π (lp–π) interactions can differ in strength and origin. Water–indole, water–uracil, chloride–TCB lp–π have very different electrostatic (ES), polarization (POL), charge transfer (CT), dispersion (DISP) components.

10.1039/c6cp01524g article EN cc-by-nc Physical Chemistry Chemical Physics 2016-01-01

An alternative to classical? In square-planar d8 complexes the metal ion can interact with axial H2O molecules either as a Lewis acid or base. Ab initio calculations predicted that uncharged PtII form hydrogen-bond-like interaction H2O, in which acts Such nonclassical OH⋅⋅⋅Pt hydrogen bond has now been identified crystals of trans-[PtCl2(NH3)(N-glycine)]⋅H2O by neutron diffraction.

10.1002/anie.201001892 article EN Angewandte Chemie International Edition 2010-07-02

Most and least electrostatic repulsive parts of a complex presented by red blue isosurface potential energy density.

10.1039/c5cp04489h article EN Physical Chemistry Chemical Physics 2015-01-01

The origin of the anomalous H8 chemical shifts observed in 1H-NMR spectra oligonucleotides cross-linked at a GpG sequence with cis-[Pt(NH3)2]2+ has been investigated and clarified. main contributions that distinguish resonances two platinum-ligating guanines from other GH8 signals each are: (a) inductive effect platinum binding which we have recently quantified as downfield shift 0.48 +/- 0.07 ppm (M. H. Fouchet, D. Lemaire, J. Kozelka J.-C. Chottard, unpublished results); (b) ring-current...

10.1111/j.1432-1033.1992.tb16855.x article EN European Journal of Biochemistry 1992-05-01

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTMolecular mechanics calculations on cis-[Pt(NH3)2{d(GpG)}] adducts in two oligonucleotide duplexesJiri Kozelka, Gregory A. Petsko, Stephen J. Lippard, and Gary QuigleyCite this: Am. Chem. Soc. 1985, 107, 13, 4079–4081Publication Date (Print):June 1, 1985Publication History Published online1 May 2002Published inissue 1 June 1985https://doi.org/10.1021/ja00299a055RIGHTS & PERMISSIONSArticle Views92Altmetric-Citations63LEARN ABOUT THESE METRICSArticle...

10.1021/ja00299a055 article EN Journal of the American Chemical Society 1985-06-01

Which cisplatin form reacts with DNA? Rate constants determined for the platination of hairpin-stabilized duplexes I and II (see picture) 1) monoaquated complex cis-[PtCl(NH3)2(H2O)]+, considered currently as actual species which binds to DNA, 2) diaqua cis-[Pt(NH3)2(H2O)2]2+ , 3) conjugate base latter, cis-[Pt(OH)(NH3)2(H2O)]+, suggest that undergoes double hydrolysis before reacting DNA. The double-stranded oligonucleotides d(TATGGTATT4ATACCATA) (I) d(TATAGTATT4ATACTATA) (II) were allowed...

10.1002/1521-3765(20000602)6:11<2002::aid-chem2002>3.0.co;2-h article EN Chemistry - A European Journal 2000-06-02

Abstract In order to assess the geometric changes caused when antitumor drug cis ‐diammine‐dichloroplatinum(II) ( ‐DDP) binds DNA, molecular mechanics calculations were performed on two double‐stranded and single‐stranded oligonucleotides their adducts with ‐{Pt(NH 3 ) 2 } 2+ . For platinated duplexes, three model structures have been derived, one involving only local disruption of base pairing retention helix directionality, models showing pronounced kinking double helix. One kinked is...

10.1002/bip.360260804 article EN Biopolymers 1987-08-01

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTHigh-salt and low-salt models for kinked adducts of cis-diamminedichloroplatinum(II) with oligonucleotide duplexesJiri Kozelka, Gregory A. Petsko, Gary J. Quigley, Stephen LippardCite this: Inorg. Chem. 1986, 25, 8, 1075–1077Publication Date (Print):April 1, 1986Publication History Published online1 May 2002Published inissue 1 April 1986https://pubs.acs.org/doi/10.1021/ic00228a002https://doi.org/10.1021/ic00228a002research-articleACS...

10.1021/ic00228a002 article EN Inorganic Chemistry 1986-04-01

An MP2 ab initio study of the interaction between a H(2)O molecule and trans-[Pt(OH)(2)(NH(3))(2)] revealed HO-H small middle dot dotPt(II) hydrogen bond (see picture) with strong dispersion component (ca. 4 kcal mol(-1)). This is independent charge on complex likely to be ubiquitous in aqueous solutions Pt(II) complexes.

10.1002/(sici)1521-3773(20000103)39:1<198::aid-anie198>3.0.co;2-o article EN Angewandte Chemie International Edition 2000-01-03

The cytotoxic, pyrazolato-bridged dinuclear platinum(II) complex [(cis-{Pt(NH3)2})2(mu-OH)(mu-pz)]2+ (pz=pyrazolate) has been found to cross-link two adjacent guanines of a double-stranded DNA decamer without destabilizing the duplex and changing directionality helix axis. A 1H NMR study oligonucleotide d(CTCTG*G*TCTC)-d(GAGACCAGAG), cross-linked at G* by [(cis-{Pt(NH3)2})2(mu-pz)]3+, molecular dynamics simulations explicitly solvated were performed characterize structural details adduct....

10.1002/chem.200500923 article EN Chemistry - A European Journal 2006-03-03

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTcis-Diamminediaquaplatinum(II) selectivity for GpG: influence of the adjacent base on first platination stepAbdelazize Laoui, Jiri Kozelka, and Jean Claude ChottardCite this: Inorg. Chem. 1988, 27, 16, 2751–2753Publication Date (Print):August 1, 1988Publication History Published online1 May 2002Published inissue 1 August 1988https://pubs.acs.org/doi/10.1021/ic00289a002https://doi.org/10.1021/ic00289a002research-articleACS PublicationsRequest reuse...

10.1021/ic00289a002 article EN Inorganic Chemistry 1988-08-01

The "inverse hydration" of neutral complexes Pt(II) by an axial water molecule, whose one OH-bond is oriented toward Pt, has been the subject recent works, theoretical as well experimental. To study influence ligands on this non-conventional H-bond, we extend here our previous energy calculations, using second-order Moeller-Plesset perturbation theory (MP2) method together with Dolg-Pélissier pseudopotential for platinum, to various including well-known chemotherapeutic agent "cisplatin"....

10.1021/ic301512c article EN Inorganic Chemistry 2013-01-24

Using concentration measurements based on high performance liquid chromatography, we have investigated the kinetics of reaction between single-stranded oligonucleotides containing a d(GpG) sequence, i.e., d(GG), d(TGG), d(TTGG), and d(CTGGCTCA), platinum complexes cis-[Pt(NH(3))(2)(H(2)O)(2)](2+) (1) [Pt(NH(3))(3)(H(2)O)](2+) (2). The rate constants for substitution one aqua ligand in 1 or 2 by each guanine were individually measured, as well as, 1, those subsequent conversion monoadducts to...

10.1021/ic951136e article EN Inorganic Chemistry 1996-01-01

A model compound of the second most abundant DNA adduct antitumor agent cisplatin has been synthesized and structurally spectroscopically characterized its conformational behavior examined: cis-[(NH(3))(2)Pt(9-MeA-N7)(9-EtGH-N7)](NO(3))(2).2H(2)O (9-MeA = 9-methyladenine; 9-EtGH 9-ethylguanine) crystallizes in monoclinic system, space group P2(1)/n (No. 14) with a 7.931(2), b 11.035(3), c 26.757(6) Å, beta 94.94(2) degrees, Z 4. The two purine bases adopt head-to-head orientation, NH(2)...

10.1021/ic950754s article EN Inorganic Chemistry 1996-01-01

Abstract The kinetics of the reactions between GG‐containing double‐stranded oligonucleotide d(TTGGCCAA) 2 ( II ) and platinum complexes cis ‐[Pt‐(NH 3 (H O) ] 2+ 1 [Pt(NH ‐(H O)] were studied compared with those already determined for single‐stranded octanucleotide d(CTGGCTCA) I ). [1] results as follows: i) Complex reacted faster than both . ii) Both This acceleration was greater (x 13) (x4) only due to increase platination rate 5′‐G GG sequence. iii) For , first by on 3′‐G. difference...

10.1002/chem.19960020906 article EN Chemistry - A European Journal 1996-09-01

Several proteins that specifically bind to DNA modified by cisplatin, including those containing HMG-domains, mediate antitumor activity of this drug. Oligodeoxyribonucleotide duplexes a single, site-specific interstrand cross-link cisplatin were probed for recognition the rat chromosomal protein HMGB1 and its domains A B using electrophoretic mobility-shift assay. It has been found full-length domain which lysine-rich region (seven amino acid residues) A/B linker is attached at N-terminus...

10.1021/bi026695t article EN Biochemistry 2003-01-17

The influence of the presence DNA on kinetics cisplatin (cis-[PtCl2(NH3)2]) aquation (replacement Cl- by H2O) and anation H2O Cl-) involved in hydrolysis have been determined two-dimensional [1H,15N] HMQC NMR spectroscopy. Single-stranded dT20 double-stranded [d(AT)10]2 oligonucleotides were used as models, avoiding guanines which are known to react rapidly with aquated forms. Reactions starting from cis-[PtCl2(15NH3)2], or a stoichiometric mixture cis-[Pt(15NH3)2(H2O)2]2+ (all 0.5 mM...

10.1002/chem.200500002 article EN Chemistry - A European Journal 2005-04-13

Abstract N ‐Aminoguanidine (Amgu) was examined for its behaviour as a ligand platinum(II) and palladium(II). Protonated AmguH + can coordinate platinum monodentate bound via the N4 amino group. Deprotonated, electrically neutral Amgu forms chelate complexes with both Pt II Pd ; in these is coordinated to metal by group deprotonated N1 imino group, forming five‐membered ring. K[PtCl 3 (dmso)] reacted · HCl yield complex trans S, suggesting that an exchange between binding sites followed...

10.1002/ejic.200600998 article EN European Journal of Inorganic Chemistry 2007-02-26

The kinetics of the reactions between diaqua form antitumor drug cisplatin, cis-[Pt(NH3)2(H2O)2]2+, and two hairpin-stabilized duplex oligonucleotides, d(TATGGTATTTTTATACCATA) (I) d(TATAGTATTTTTATACTATA) (II), were investigated. Oligonucleotides I II used as models for GG AG sequences within DNA, which are known major sites platinum binding. guanines shown to react with similar rates (k5' = 18 ± 2 k3' 15 1 M-1 s-1), roughly twice fast guanine (k3' 9 s-1). Platination adenine was also...

10.1021/ic980008y article EN Inorganic Chemistry 1998-07-17
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