Netta Shemesh

ORCID: 0000-0003-0371-0246
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About
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Research Areas
  • Genetics, Aging, and Longevity in Model Organisms
  • Heat shock proteins research
  • Endoplasmic Reticulum Stress and Disease
  • Spaceflight effects on biology
  • RNA and protein synthesis mechanisms
  • Mitochondrial Function and Pathology
  • Bipolar Disorder and Treatment
  • Circadian rhythm and melatonin
  • Genetic Neurodegenerative Diseases
  • Bioinformatics and Genomic Networks
  • Enzyme Structure and Function
  • Microbial Metabolic Engineering and Bioproduction
  • Pesticide and Herbicide Environmental Studies
  • Genomics and Rare Diseases
  • Cancer Genomics and Diagnostics
  • Regional resilience and development
  • Weed Control and Herbicide Applications
  • RNA Research and Splicing
  • Photoacoustic and Ultrasonic Imaging
  • 3D Printing in Biomedical Research
  • Pluripotent Stem Cells Research
  • Biochemical Acid Research Studies
  • Adenosine and Purinergic Signaling
  • Aging and Gerontology Research
  • Muscle Physiology and Disorders

Tel Aviv University
2010-2024

Colorado State University
2022

Ben-Gurion University of the Negev
2013-2021

All cells rely on highly conserved protein folding and clearance pathways to detect resolve damage maintain homeostasis (proteostasis). Because age is associated with an imbalance in proteostasis, there a need understand how regulated multicellular organism that undergoes aging. We have observed the ability of Caenorhabditis elegans proteostasis declines sharply following onset oocyte biomass production, suggesting restricted capacity may be linked reproduction. To test this hypothesis, we...

10.1111/acel.12110 article EN Aging Cell 2013-06-04

Abstract The sensitivity of the protein-folding environment to chaperone disruption can be highly tissue-specific. Yet, organization system across physiological human tissues has received little attention. Through computational analyses large-scale tissue transcriptomes, we unveil that is composed core elements are uniformly expressed tissues, and variable differentially fit with tissue-specific requirements. We demonstrate via a proteomic analysis muscle-specific signature functional...

10.1038/s41467-021-22369-9 article EN cc-by Nature Communications 2021-04-12

Protein phosphorylation underlies cellular response pathways across eukaryotes and is governed by the opposing actions of phosphorylating kinases de-phosphorylating phosphatases. While phosphatases have been extensively studied, their organization mechanisms which they balance each other are not well understood. To address these questions we performed quantitative analyses large-scale 'omics' datasets from yeast, fly, plant, mouse human. We uncovered an asymmetric a previously-hidden scale:...

10.1371/journal.pcbi.1005221 article EN cc-by PLoS Computational Biology 2017-01-30

Safeguarding the proteome is central to health of cell. In multi-cellular organisms, composition proteome, and by extension, protein-folding requirements, varies between cells. agreement, chaperone network differs tissues. Here, we ask how expression regulated in a cell type-specific manner whether cellular differentiation affects expression. Our bioinformatics analyses show that myogenic transcription factor HLH-1 (MyoD) can bind promoters genes expressed or required for folding muscle...

10.1371/journal.pgen.1006531 article EN cc-by PLoS Genetics 2016-12-30

A longstanding puzzle in human genetics is what limits the clinical manifestation of hundreds hereditary diseases to certain tissues, while their causal genes are expressed throughout body. general conception that tissue-selective disease phenotypes emerge when masking factors operate unaffected but specifically absent or insufficient disease-manifesting tissues. Although this has critical impact on understanding manifestation, it was never challenged a systematic manner across variety and...

10.1371/journal.pgen.1007327 article EN cc-by PLoS Genetics 2018-05-03

Protein folding and clearance networks sense respond to misfolded aggregation-prone proteins by activating cytoprotective cell stress responses that safeguard the proteome against damage, maintain health of cell, enhance lifespan. Surprisingly, cellular proteostasis undergoes a sudden widespread failure early in Caenorhabditis elegans adulthood, with marked consequences on functions later life. These changes regulation quality control systems, such as chaperones, ubiquitin proteasome system...

10.2174/1389202915666140221005023 article EN Current Genomics 2014-04-01

Protein homeostasis is remodeled early in Caenorhabditis elegans adulthood, resulting a sharp decline folding capacity and reduced ability to cope with chronic acute stress. Endocrine signals from the reproductive system can ameliorate this proteostatic collapse reshape quality control network. Given that environmental conditions, such as food availability, impact success, we asked whether conditions of dietary restriction (DR) also reverse function at transition if so, gonadal signaling...

10.1111/acel.12891 article EN cc-by Aging Cell 2019-01-15

Abstract We mimicked mild mitochondrial-distress robustly reported in bipolar-disorder (BD) by chronic exposure to uniquely low doses of inhibitors mitochondrial-respiration complexes vitro and vivo. Exposure the neuronal-originating SH-SY5Y cells very dose (10 pM) rotenone, a complex (Co)I inhibitor, for 72 or 96 h did not affect cell viability reactive oxygen species (ROS) levels. Yet, it induced dual effect on mitochondrial-respiration: overshooting statistically significant several-fold...

10.1038/s41398-021-01215-y article EN cc-by Translational Psychiatry 2021-02-12

The folding and assembly of proteins is essential for protein function, the long-term health cell, longevity organism. Historically, function regulation was studied in vitro, isolated tissue culture cells unicellular organisms. Recent studies have uncovered links between homeostasis (proteostasis), metabolism, development, aging, temperature-sensing. These findings led to development new tools monitoring model metazoan organism Caenorhabditis elegans. In our laboratory, we combine behavioral...

10.3791/50840 article EN Journal of Visualized Experiments 2013-12-16

Caenorhabditis elegans somatic protein homeostasis (proteostasis) is actively remodeled at the onset of reproduction. This proteostatic collapse regulated cell-nonautonomously by signals from reproductive system that transmit commitment to reproduction cells. Here, we asked whether link between and proteostasis could be uncoupled activating downstream effectors in gonadal longevity cascade. Specifically, examined overexpression lipl-4 (lipl-4(oe)), a target gene pathway, or increase...

10.3389/fnmol.2017.00101 article EN cc-by Frontiers in Molecular Neuroscience 2017-04-20

Cell-non-autonomous signals dictate the functional state of cellular quality control systems, remodeling ability cells to cope with stress and maintain protein homeostasis (proteostasis). One highly regulated cell-non-autonomous switch controls proteostatic capacity in Caenorhabditis elegans adulthood. Signals from reproductive system down-regulate cyto-protective pathways, unless countered by reporting on germline proliferation disruption. Here, we utilized dihomo-γ-linolenic acid (DGLA)...

10.3389/fnmol.2017.00254 article EN cc-by Frontiers in Molecular Neuroscience 2017-08-08

Background Weed control is essential in modern agriculture, though it has become more difficult with the emergence of resistance to most current herbicides and slow registration process for new compounds. Objective Identify herbicide candidates using an innovative artificial intelligence algorithm that takes into effect biological parameters goal reducing research development time herbicides. Results We describe discovery 4-chloro-2-pentenamides as novel inhibitors protoporphyrinogen oxidase...

10.51694/advweedsci/2023;41:00011 article EN cc-by Advances in Weed Science 2023-01-01

Clustered regularly interspaced short palindromic repeats (CRISPR)-Cas (CRISPR-associated proteins) systems provide acquired heritable protection to bacteria and archaea against selfish DNA elements, such as viruses. These must be tightly regulated because they can capture fragments from foreign also occasionally self-chromosomes, resulting in autoimmunity. Most known species the halophilic archaeal genus Haloferax contain type I-B CRISPR-Cas systems, strongest hotspot for self-spacer...

10.3390/microorganisms12091772 article EN cc-by Microorganisms 2024-08-27

The folding and assembly of proteins is essential for protein function, the long-term health cell, longevity organism. Historically, function regulation was studied in vitro, isolated tissue culture cells unicellular organisms. Recent studies have uncovered links between homeostasis (proteostasis), metabolism, development, aging, temperature-sensing. These findings led to development new tools monitoring model metazoan organism Caenorhabditis elegans. In our laboratory, we combine behavioral...

10.3791/50840-v article EN Journal of Visualized Experiments 2013-12-18

<h3>Background</h3> Quinolinic acid (QA) induced striatal lesion is a well established model for excitotoxicity, one of the key hallmarks Huntington9s disease pathophysiological processes. Stem cell based treatment promising frontier this incurable condition. One major caveats stem transplantation their fate post transplantation. <h3>Aims</h3> To follow transplanted cells9 using in vivo MRI scans followed by histological study. <h3>Methods</h3> Rat mesenchymal cells (MSC) went through two...

10.1136/jnnp.2010.222596.15 article EN Journal of Neurology Neurosurgery & Psychiatry 2010-09-01

ABSTRACT A longstanding puzzle in human genetics is what limits the clinical manifestation of hundreds hereditary diseases to certain tissues or cell types, while their causal genes are present and expressed throughout body. Here we considered a possible role for paralogs affecting this tissue selectivity. It has been shown across organisms that can compensate loss each other. We hypothesized specifically disease imbalanced, leading insufficient compensation emergence phenotypes. While...

10.1101/171090 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2017-08-01

Abstract The sensitivity of the protein-folding environment to chaperone disruption can be highly tissue-specific. Yet, organization system across physiological human tissues has received little attention. Here, we used tissue RNA-sequencing profiles analyze expression and chaperones 29 main tissues. We found that relative protein-coding genes, were significantly more ubiquitously expressed all Nevertheless, differential analysis revealed most up- or down-regulated in certain tissues,...

10.1101/2020.03.04.976720 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2020-03-05

Abstract Weed control is essential in modern agriculture, though it has become more difficult with the emergence of resistance to most current herbicides and a slow registration process new compounds. A approach identify possible herbicide candidates using an artificial intelligence algorithm that takes into effect biological parameters goal reducing R&amp;D time on herbicides. Herein we describe discovery 4-chloro-2-pentenamides as novel inhibitors protoporphyrinogen oxidase, known target...

10.21203/rs.3.rs-2341162/v1 preprint EN cc-by Research Square (Research Square) 2022-12-14
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