Jessica Lee

ORCID: 0000-0003-0757-4237
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About
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Research Areas
  • Genetic diversity and population structure
  • Wildlife Ecology and Conservation
  • Genomics and Phylogenetic Studies
  • Identification and Quantification in Food
  • Genomic variations and chromosomal abnormalities
  • RNA Research and Splicing
  • Wildlife Conservation and Criminology Analyses
  • RNA and protein synthesis mechanisms
  • Genomics and Rare Diseases
  • CRISPR and Genetic Engineering
  • Chromosomal and Genetic Variations
  • Genomics and Chromatin Dynamics

The rich diversity of morphology and behavior displayed across primate species provides an informative context in which to study the impact genomic on fundamental biological processes. Analysis that insight into long-standing questions evolutionary conservation biology is urgent given severe threats these are facing. Here, we present high-coverage whole-genome data from 233 representing 86% genera all 16 families. This dataset was used, together with fossil calibration, create a nuclear DNA...

10.1126/science.abn7829 article EN Science 2023-06-01
Hong Gao Tobias Hamp Jeffrey M. Ede Joshua G. Schraiber Jeremy F. McRae and 92 more Moriel Singer‐Berk Yanshen Yang Anastasia S. D. Dietrich Petko Fiziev Lukas F. K. Kuderna Laksshman Sundaram Yibing Wu Aashish N. Adhikari Yair Field Chen Chen Serafim Batzoglou François Aguet Gabrielle Lemire Rebecca Reimers Daniel J. Balick Mareike C. Janiak Martin Kuhlwilm Joseph D. Orkin Shivakumara Manu Alejandro Valenzuela Juraj Bergman Marjolaine Rousselle Felipe Ennes Silva Lídia Águeda Julie Blanc Marta Gut Dorien de Vries Ian Goodhead R. Alan Harris Muthuswamy Raveendran Axel Jensen Idriss S. Chuma Julie E. Horvath Christina Hvilsom David Juan Peter Frandsen Fabiano Rodrigues de Melo Fabrício Bertuol Hazel Byrne Iracilda Sampaio Izeni Pires Farias João Valsecchi Mariluce Rezende Messias Maria Nazareth Ferreira da Silva Mihir Trivedi Rogério Vieira Rossi Tomas Hrbek Nicole Andriaholinirina C. Rabarivola Alphonse Zaramody Clifford J. Jolly Jane E. Phillips‐Conroy Gregory K. Wilkerson Christian R. Abee Joe H. Simmons Eduardo Fernández‐Duque Sree Kanthaswamy Fekadu Shiferaw Dong‐Dong Wu Long Zhou Yong Shao Guojie Zhang Julius D. Keyyu Sascha Knauf Minh Đức Lê Esther Lizano Stefan Merker Arcadi Navarro Thomas Bataillon Tilo Nadler Chiea Chuen Khor Jessica Lee Patrick Tan Weng Khong Lim Andrew C. Kitchener Dietmar Zinner Marta Gut Amanda Melin Katerina Guschanski Mikkel Heide Schierup Robin M. D. Beck Govindhaswamy Umapathy Christian Roos Jean P. Boubli Monkol Lek Shamil Sunyaev Anne O’Donnell‐Luria Heidi L. Rehm Jinbo Xu Jeffrey Rogers Tomás Marquès‐Bonet Kyle Kai‐How Farh

Personalized genome sequencing has revealed millions of genetic differences between individuals, but our understanding their clinical relevance remains largely incomplete. To systematically decipher the effects human variants, we obtained whole-genome data for 809 individuals from 233 primate species and identified 4.3 million common protein-altering variants with orthologs in humans. We show that these can be inferred to have nondeleterious humans based on presence at high allele...

10.1126/science.abn8197 article EN Science 2023-06-01
Lukas F. K. Kuderna Jacob C. Ulirsch Sabrina Mohd Rashid Mohamed Ameen Laksshman Sundaram and 87 more Glenn Hickey Anthony J. Cox Hong Gao Arvind Kumar François Aguet Matthew J. Christmas Hiram Clawson Maximilian Haeussler Mareike C. Janiak Martin Kuhlwilm Joseph D. Orkin Thomas Bataillon Shivakumara Manu Alejandro Valenzuela Juraj Bergman Marjolaine Rouselle Felipe Ennes Silva Lídia Águeda Julie Blanc Marta Gut Dorien de Vries Ian Goodhead R. Alan Harris Muthuswamy Raveendran Axel Jensen Idriss S. Chuma Julie E. Horvath Christina Hvilsom David Juan Peter Frandsen Joshua G. Schraiber Fabiano Rodrigues de Melo Fabrício Bertuol Hazel Byrne Iracilda Sampaio Izeni Pires Farias João Valsecchi Malu Messias Maria Nazareth Ferreira da Silva Mihir Trivedi Rogério Vieira Rossi Tomas Hrbek Nicole Andriaholinirina C. Rabarivola Alphonse Zaramody Clifford J. Jolly Jane E. Phillips‐Conroy Gregory K. Wilkerson Christian R. Abee Joe H. Simmons Eduardo Fernández‐Duque Sree Kanthaswamy Fekadu Shiferaw Dong‐Dong Wu Long Zhou Yong Shao Guojie Zhang Julius D. Keyyu Sascha Knauf Minh Đức Lê Esther Lizano Stefan Merker Arcadi Navarro Tilo Nadler Chiea Chuen Khor Jessica Lee Patrick Tan Weng Khong Lim Andrew C. Kitchener Dietmar Zinner Marta Gut Amanda Melin Katerina Guschanski Mikkel Heide Schierup Robin M. D. Beck Ioannis Karakikes Ke Wang Govindhaswamy Umapathy Christian Roos Jean P. Boubli Adam Siepel Anshul Kundaje Benedict Paten Kerstin Lindblad‐Toh Jeffrey Rogers Tomás Marquès‐Bonet Kyle Kai‐How Farh

Abstract Noncoding DNA is central to our understanding of human gene regulation and complex diseases 1,2 , measuring the evolutionary sequence constraint can establish functional relevance putative regulatory elements in genome 3–9 . Identifying genomic that have become constrained specifically primates has been hampered by faster evolution noncoding compared protein-coding 10 relatively short timescales separating primate species 11 previously limited availability whole-genome sequences 12...

10.1038/s41586-023-06798-8 article EN cc-by Nature 2023-11-29

ABSTRACT Accurate identification of evolutionarily significant units rare and threatened organisms provides a foundation for effective management conservation. Up to seven subspecies the critically endangered Yellow‐crested Cockatoo ( Cacatua sulphurea ) have been described, four which were commonly recognised pre‐2014. In absence genotypic data, C. delimitation has based on morphology, behaviour biogeography. To clarify genetic relationships shed light diversification this parrot radiation,...

10.1111/mec.17616 article EN cc-by-nc-nd Molecular Ecology 2024-12-17

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10.1017/s0030605324001054 article EN cc-by-nc-nd Oryx 2024-09-01
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