Augusto Borges

ORCID: 0000-0003-0773-5352
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About
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Research Areas
  • Ecology and Vegetation Dynamics Studies
  • Cellular Mechanics and Interactions
  • Protist diversity and phylogeny
  • Agroforestry and silvopastoral systems
  • DNA and Nucleic Acid Chemistry
  • Nematode management and characterization studies
  • Head and Neck Anomalies
  • Conservation, Biodiversity, and Resource Management
  • Diffusion and Search Dynamics
  • Insect Resistance and Genetics
  • Developmental Biology and Gene Regulation
  • Entomopathogenic Microorganisms in Pest Control
  • Species Distribution and Climate Change
  • Plant and fungal interactions
  • Biocrusts and Microbial Ecology
  • RNA Interference and Gene Delivery
  • Heat shock proteins research
  • Underwater Vehicles and Communication Systems
  • 3D Printing in Biomedical Research
  • Marine Sponges and Natural Products
  • Bacterial Genetics and Biotechnology
  • Plant Molecular Biology Research
  • Plant nutrient uptake and metabolism
  • Polysaccharides and Plant Cell Walls
  • Marine animal studies overview

Ludwig-Maximilians-Universität München
2023-2025

Helmholtz Zentrum München
2021-2024

Instituto de Fisica de Liquidos y Sistemas Biologicos
2018-2023

Consejo Nacional de Investigaciones Científicas y Técnicas
2018-2023

Abstract Soil stresses impact crop yields, presenting global agricultural challenges. compaction triggers root length reduction and radial expansion driven by the plant hormone ethylene. We report how ethylene controls cell wall properties to promote expansion. demonstrate soil stress, via ethylene, upregulates Auxin Response Factor1 in cortex, which represses Cellulose Synthase ( CESA ) genes. repression drives of cortical cells modifying thickness mechanics their walls, result a “stiff...

10.1101/2025.03.02.640043 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2025-03-03

Abstract During tissue development and regeneration, cells interpret exert mechanical forces that are challenging to measure in vivo. Therefore, stress inference algorithms have emerged as powerful tools estimate stresses. However, how incorporate dynamics effectively into the remains elusive. Here, we present ForSys, a Python-based software estimates intercellular stresses intracellular pressures using time-lapse microscopy. We validated ForSys silico vivo well-characterized mucociliary...

10.1101/2024.05.28.595800 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-05-29

ABSTRACT Collective cell rotations are widely used during animal organogenesis. Theoretical and in vitro studies have conceptualized rotating cells as identical rigid-point objects that stochastically break symmetry to move monotonously perpetually within an inert environment. However, it is unclear whether this notion can be extrapolated a natural context, where ephemeral heterogeneous cellular cohorts interact with active epithelium. In zebrafish neuromasts, nascent sibling hair invert...

10.1242/dev.200975 article EN cc-by Development 2023-03-22

Abstract Biological systems are never at equilibrium but maintain stability despite perennial external disturbance. A prime example is organ regeneration, whereby intrinsically stochastic damage, organs rebuilt via controlled cellular proliferation. Here, we use a mathematical approach to understand how cell decides re-enter and exit mitosis during repair. Using empirical data from regenerating neuromasts in larval zebrafish, identify minimal model based on ordinary differential equations...

10.1101/2024.10.22.619208 preprint EN cc-by-nd 2024-10-22

Amazonia is well known for its high natural regeneration capacity; this reason, passive restoration normally recommended the recovery of degraded forests. However, highly deforested landscapes in southern require active restoration. Since methods can shape quality and speed early forest recovery, study aimed to verify how pushes sites stably covered with exotic grasses towards recovery. We evaluated succession at sites, i.e., soil plowing, direct seeding pioneer species, seedling stock...

10.3390/f12081022 article EN Forests 2021-07-31

Abstract Background: Amazonia is well known for its high natural regeneration capacity; this reason, passive restoration normally recommended the recovery of degraded forests. However, highly deforested landscapes in southern require active restoration. Since methods can shape quality and speed early forest recovery, study aimed to verify how pushes non-resilient sites towards recovery. Methods: We evaluated succession at sites, i.e. soil plowing, direct seeding pioneer species seedling...

10.21203/rs.3.rs-557683/v1 preprint EN cc-by Research Square (Research Square) 2021-06-03

The reaction-diffusion model constitutes one of the most influential mathematical models to study distribution morphogens in tissues. Despite its widespread use, effect finite tissue size on model-predicted spatio-temporal morphogen distributions has not been completely elucidated. In this study, we analytically investigated predicted by a one-dimensional domain, as proxy for biological tissue, and compared it with solution infinite-domain model. We explored reduced parameter, length units...

10.1098/rsos.211112 article EN cc-by Royal Society Open Science 2022-01-01

Transport of cellular cargo by molecular motors requires directionality to ensure proper biological functioning. During sporulation in Bacillus subtilis, chromosome transport is mediated the interaction between membrane-bound DNA translocase SpoIIIE and specific octameric sequences (SRS). Whether SRS regulate recruiting orienting or simply catalyzing its translocation activity still unclear. By using atomic force microscopy single-round fast kinetics assays we determined localization...

10.1038/s41598-018-23400-8 article EN cc-by Scientific Reports 2018-03-27

Abstract The reaction-diffusion model constitutes one of the most influential mathematical models to study distribution morphogens in tissues. Despite its widespread use, effect finite tissue size on model-predicted spatiotemporal morphogen distributions has not been completely elucidated. In this study, we analytically investigated predicted by a 1D domain, as proxy for biological tissue, and compared it with solution infinite-domain model. We explored reduced parameter, length units...

10.1101/2021.02.16.431401 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2021-02-16

Transport of cellular cargo by molecular motors requires directionality to ensure proper biological functioning. During sporulation in Bacillus subtilis, chromosome transport is mediated the interaction between membrane bound SpoIIIE DNA translocase and specific octameric sequences (SRS). Whether SRS regulate recruiting orienting or simply catalyzing its translocation activity still unclear. By using atomic force microscopy single-round fast kinetics assays we determined localization...

10.2139/ssrn.3155662 article EN SSRN Electronic Journal 2018-01-01

Mutations in the transcriptional co-activator Eya1 cause branchio-oto-renal syndrome (BOR) humans. BOR has an incidence of 1/40,000 and is characterized by congenital branchial fistulas, malformations inner ear kidney hypoplasia. Therapeutic interventions for are currently limited to reparative surgery, hearing aids dialysis. Here we use mechanosensory lateral line zebrafish better understand role organogenesis. The develops from a primordium formed approximately 150 cells that move together...

10.2139/ssrn.4239724 article EN SSRN Electronic Journal 2022-01-01

Mutations in the transcriptional co-activator Eya1 cause branchio-oto-renal syndrome (BOR) humans and equivalent condition vertebrates. BOR is characterized by congenital branchial fistulas, malformations of inner ear kidney hypoplasia. Here we use mechanosensory lateral line zebrafish to better understand role organogenesis. The develops from a primordium formed approximately 150 cells that move together head tail embryo at constant velocity. This invariant migration occurs over trail Sdf1a...

10.1101/2021.01.27.428404 preprint EN public-domain bioRxiv (Cold Spring Harbor Laboratory) 2021-01-27
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