A5055162004- Genomics and Phylogenetic Studies
- Chromosomal and Genetic Variations
- CRISPR and Genetic Engineering
- Plant Disease Resistance and Genetics
- Animal Genetics and Reproduction
- Advances in Cucurbitaceae Research
- Caching and Content Delivery
- Advanced Data Storage Technologies
- Peer-to-Peer Network Technologies
- Machine Learning in Bioinformatics
- RNA and protein synthesis mechanisms
- Identification and Quantification in Food
- Plant tissue culture and regeneration
Beijing University of Posts and Telecommunications
2024
North China University of Science and Technology
2020-2022
Abstract Cucurbitales are an important order of flowering plants known for encompassing edible economic and medicinal value numerous ornamental horticultural value. By reanalyzing the genomes two representative families (Cucurbitaceae Begoniaceae) in Cucurbitales, we found that previously identified Cucurbitaceae common paleotetraploidization occurred shortly after core-eudicot-common hexaploidization event is shared by including Begoniaceae. We built a multigenome alignment framework...
Abstract Background Duplicated gene pairs produced by ancient polyploidy maintain high sequence similarity over a long period of time and may result from illegitimate recombination between homeologous chromosomes. The genomes Asian cultivated rice Oryza sativa ssp. indica (XI) japonica (GJ) have recently been updated, providing new opportunities for investigating ongoing conversion events their impact on genome evolution. Results Using comparative genomics phylogenetic analyses, we evaluated...
Solanales, an order of flowering plants, contains the most economically important vegetables among all plant orders. To date, many Solanales genomes have been sequenced. However, evolutionary processes polyploidization events in and impact polyploidy on species diversity remain poorly understood. We compared two representative (Solanum lycopersicum L. Ipomoea triloba L.) Vitis vinifera genome confirmed independent events. Solanaceae common hexaploidization (SCH) Convolvulaceae (CCH) occurred...
Abstract Extensive sequence similarity between duplicated gene pairs produced by paleo-polyploidization may result from illegitimate recombination homologous chromosomes. The genomes of Asian cultivated rice Xian/ indica (XI) and Geng/ japonica (GJ) have recently been updated, providing new opportunities for investigating on-going conversion events. Using comparative genomics phylogenetic analyses, we evaluated rates genes polyploidization 100 million years ago (mya) in GJ XI. At least...