Shaina Tran

ORCID: 0000-0003-2951-9730
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Congenital heart defects research
  • Single-cell and spatial transcriptomics
  • Pluripotent Stem Cells Research
  • Neuroethics, Human Enhancement, Biomedical Innovations
  • Genetics and Neurodevelopmental Disorders
  • Cardiovascular Effects of Exercise
  • Genomics and Chromatin Dynamics
  • Microfluidic and Bio-sensing Technologies
  • Cardiac pacing and defibrillation studies

University of California, San Diego
2022-2024

Abstract The heart, which is the first organ to develop, highly dependent on its form function 1,2 . However, how diverse cardiac cell types spatially coordinate create complex morphological structures that are crucial for heart remains unclear. Here we integrated single-cell RNA-sequencing with high-resolution multiplexed error-robust fluorescence in situ hybridization resolve identity of develop human heart. This approach also provided a spatial mapping individual cells enables...

10.1038/s41586-024-07171-z article EN cc-by Nature 2024-03-13

Heart failure is a leading cause of morbidity and mortality; yet gene regulatory mechanisms driving cell type-specific pathologic responses remain undefined. Here, we present the type-resolved transcriptomes, chromatin accessibility, histone modifications organization 36 non-failing failing human hearts profiled from 776,479 cells spanning all cardiac chambers. Integrative analyses revealed dynamic changes in type composition, programs organization, which expanded annotation cis-regulatory...

10.1101/2025.05.08.25327176 preprint EN cc-by-nc-nd 2025-05-09
Coming Soon ...