A5092986677- Plant Virus Research Studies
- Plant Disease Resistance and Genetics
- Plant and Fungal Interactions Research
- RNA modifications and cancer
- Plant Pathogens and Resistance
- RNA and protein synthesis mechanisms
- Genomics and Chromatin Dynamics
- Plant-Microbe Interactions and Immunity
Institute of Bioorganic Chemistry
2023-2024
Lomonosov Moscow State University
2023-2024
Potato virus Y, an important viral pathogen of potato, has several genetic variants and geographic distributions which could be affected by environmental factors, aphid vectors, reservoir plants. PVY is transmitted to virus-free potato plants aphids passed on the next vegetative generations through tubers, but effects tuber transmission in largely unknown. By using high-throughput sequencing, we investigated populations different climate zones Russia, namely Moscow Astrakhan regions. We...
Abstract A DNA sequence pattern, or “motif”, is an essential representation of DNA-binding specificity a transcription factor (TF). Any particular motif model has potential flaws due to shortcomings the underlying experimental data and computational discovery algorithm. As part Codebook/GRECO-BIT initiative, here we evaluated at large scale cross-platform recognition performance positional weight matrices (PWMs), which remain popular models in many practical applications. We applied ten...
Plant rhabdoviruses cause considerable economic losses and are a threat to the agriculture of
Potato virus Y (PVY, genus Potyvirus, family Potyviridae) is one of the most devastating and economically important potato pathogens. Members Potyviridae demonstrate high recombination rates. In nature, 5 major parental variants PVY were identified with at least 35 recombinants. this study we report two novel recombinants discovered in sprouts tubers produced field conditions Astrakhan region Russia 2021 using high-throughput sequencing de novo genome assembly. These recombinants, which...