Conformational flexibility of a model protein upon immobilization on self‐assembled monolayers

• DOI: 10.1002/bit.21724
• Publication Date: 2007-12-14T04:46:45Z
• Authors: Saharnaz Bigdeli; AmirAli H. Talasaz; Patrik Ståhl; Henrik H.J. Persson; Mostafa Ronaghi; Ronald W. Davis; Mohsen Nemat‐Gorgani
• Keywords: Models, Molecular; 0301 basic medicine; 0303 health sciences; Binding Sites; Protein Conformation; Enzymes, Immobilized; Enzyme Activation; 03 medical and health sciences; Coated Materials, Biocompatible; Glutamate Dehydrogenase; Models, Chemical; Enzyme Stability; Animals; Cattle; Computer Simulation; Adsorption; Gold; Protein Binding

AbstractThe present study reports on the retention of conformational flexibility of a model allosteric protein upon immobilization on self‐assembled monolayers (SAMs) on gold. Organothiolated SAMs of different compositions were utilized for adsorptive and covalent attachment of bovine liver glutamate dehydrogenase (GDH), a well‐characterized allosteric enzyme. Sensitive fluorimetric assays were developed to determine immobilization capacity, specific activity, and allosteric properties of the immobilized preparations as well as the potential for repeated use and continuous catalytic transformations. The allosteric response of the free and immobilized forms towards ADP, L‐leucine and high concentrations of NAD+, some of the well‐known activators for this enzyme, were determined and compared. The enzyme immobilized by adsorption or chemical binding responded similarly to the activators with a greater degree of activation, as compared to the free form. Also loss of activity involving the two immobilization procedures were similar, suggesting that residues essential for catalytic activity or allosteric properties of GDH remained unchanged in the course of chemical modification. A recently established method was used to predict GDH orientation upon immobilization, which was found to explain some of the experimental results presented. The general significance of these observations in connection with retention of native properties of protein structures upon immobilization on SAMs is discussed. Biotechnol. Bioeng. 2008;100: 19–27. © 2007 Wiley Periodicals, Inc.