Clonal dispersal is associated with tumor heterogeneity and poor prognosis in colorectal cancer

• DOI: 10.1016/j.isci.2025.112403
• Publication Date: 2025-04-10T15:44:49Z
• Authors: Selami Baglamis; Vivek M. Sheraton; Sanne M. van Neerven; Adrian Logiantara; Lisanne E. Nijman; Laura A. Hageman; Nicolas Léveillé; Clara C. Elbers; Maarten F. Bijlsma; Louis Vermeulen; Przemek M. Krawczyk; Kristiaan J. Lenos
• Keywords: Cell biology; Bioinformatics; Science; Q; Cancer

Summary: Clonal dispersal, resulting from the intermingling of tumor cell subpopulations, is thought to be a key driver of tumor heterogeneity. Despite advances in spatial modeling of cancer biology, quantification of clonal dispersal has been challenging. This study introduces a straightforward method, relying on fluorescent cell barcoding, to quantify clonal dispersal in various in vitro and in vivo models of colorectal cancer (CRC). Our approach allows for precise localization of clones and uncovering the degree of clonal mixing across different CRC models. Our findings suggest that clonal dispersal is correlated with the expression of genes involved in epithelial-mesenchymal transition and CMS4-related signaling pathways. We further identify a dispersal gene signature, associated with intratumor heterogeneity, which is a robust clinical predictor of poor prognosis and recurrence in CRC, highlighting its potential as a prognostic marker and a putative direction for therapeutic targeting.