The HMMTOP transmembrane topology prediction server
0301 basic medicine
0303 health sciences
03 medical and health sciences
Models, Statistical
Database Management Systems
Humans
Membrane Proteins
Computer Simulation
Databases, Protein
Algorithms
Markov Chains
Protein Structure, Secondary
Software
DOI:
10.1093/bioinformatics/17.9.849
Publication Date:
2002-09-30T14:33:00Z
AUTHORS (2)
ABSTRACT
Abstract
Summary: The HMMTOP transmembrane topology prediction server predicts both the localization of helical transmembrane segments and the topology of transmembrane proteins. Recently, several improvements have been introduced to the original method. Now, the user is allowed to submit additional information about segment localization to enhance the prediction power. This option improves the prediction accuracy as well as helps the interpretation of experimental results, i.e. in epitope insertion experiments.
Availability: HMMTOP 2.0 is freely available to non-commercial users at http://www.enzim.hu/hmmtop. Source code is also available upon request to academic users.
Contact: tusi@enzim.hu
* To whom correspondence should be addressed.
SUPPLEMENTAL MATERIAL
Coming soon ....
REFERENCES (0)
CITATIONS (1568)
EXTERNAL LINKS
PlumX Metrics
RECOMMENDATIONS
FAIR ASSESSMENT
Coming soon ....
JUPYTER LAB
Coming soon ....