SimService: a lightweight library for building simulation services in Python

• DOI: 10.1093/bioinformatics/btae009
• Publication Date: 2024-01-19T00:31:30Z
• Authors: T J Sego
• Keywords: 0301 basic medicine; Applications Note; 0206 medical engineering; Programming Languages; Computer Simulation; Software; Gene Library

Abstract

Summary Integrative biological modeling requires software infrastructure to launch, interconnect, and execute simulation software components without loss of functionality. SimService is a software library that enables deploying simulations in integrated applications as memory-isolated services with interactive proxy objects in the Python programming language. SimService supports customizing the interface of proxies so that simulation developers and users alike can tailor generated simulation instances according to model, method, and integrated application.

Availability and implementation SimService is written in Python, is freely available on GitHub under the MIT license at https://github.com/tjsego/simservice, and is available for download via the Python Package Index (package name “simservice”) and conda (package name “simservice” on the conda-forge channel).