DyNet: visualization and analysis of dynamic molecular interaction networks

• DOI: 10.1093/bioinformatics/btw187
• Publication Date: 2016-05-04T01:03:16Z
• Authors: Ivan H. Goenawan; Kenneth Bryan; David J. Lynn
• Keywords: Interaction network; Dynamic network analysis; Protein Interaction Networks; Network Analysis

: The ability to experimentally determine molecular interactions on an almost proteome-wide scale under different conditions is enabling researchers move from static dynamic network analysis, uncovering new insights into how interaction networks are physically rewired in response stimuli and disease. Dynamic data presents a special challenge biology. Here, we present DyNet, Cytoscape application that provides range of functionalities for the visualization, real-time synchronization analysis large multi-state users quickly identify analyze most 'rewired' nodes across many states.DyNet available at (3.2+) App Store (http://apps.cytoscape.org/apps/dynet)[e-mail] Bioinformatics online.