THREE MSA TOOLS ANALYSIS in DNA and PROTEIN DATASETS

• DOI: 10.51477/mejs.983750
• Publication Date: 2022-01-07T08:01:22Z
• Authors: Fırat AŞIR; Tuğcan KORAK; Özgür ÖZTÜRK
• Keywords: Multiple sequence alignment; Alignment-free sequence analysis; Sequence (biology); Protein sequencing

Multiple sequence alignment (MSA) is used to align three or more sequences of DNA, RNA and protein. It prominent for constructing phylogenetic trees evolutionary relationships between with regard similarities dissimilarities. Variety multiple tools are available online, each having different methods parameters sequences. In this article MSA tools; CLUSTALW, SAGA MAFFT five datasets BALiBASE_R9, DIRMBASE, SABmark additionally constructed DNABali ProteinBali alignment. Result show that both protein DNA dataset, may be useful among tool used.