D J Hopper

ORCID: 0009-0007-2969-5992
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Research Areas
  • Microbial Metabolic Engineering and Bioproduction
  • Microbial bioremediation and biosurfactants
  • Enzyme Catalysis and Immobilization
  • Enzyme Structure and Function
  • Microbial metabolism and enzyme function
  • Algal biology and biofuel production
  • Amino Acid Enzymes and Metabolism
  • Photosynthetic Processes and Mechanisms
  • Metabolism and Genetic Disorders
  • Metabolomics and Mass Spectrometry Studies
  • Electrochemical sensors and biosensors
  • Chemical Reactions and Isotopes
  • Spectroscopy and Laser Applications
  • Analytical Chemistry and Chromatography
  • Metal-Catalyzed Oxygenation Mechanisms
  • Biofuel production and bioconversion
  • Microbial Metabolites in Food Biotechnology
  • Fermentation and Sensory Analysis
  • Biochemical and biochemical processes
  • Pharmacogenetics and Drug Metabolism
  • Chromatography in Natural Products
  • Plant and fungal interactions
  • Chromium effects and bioremediation
  • Botanical Research and Chemistry
  • Porphyrin Metabolism and Disorders

Aberystwyth University
1995-2018

Institute of Biological, Environmental and Rural Sciences
2016-2018

Oak Ridge National Laboratory
2016

National Oceanography Centre
2016

Queensland University of Technology
2007-2008

University of Wales
1993-2006

National Student Clearinghouse Research Center
1991

Entergy (United States)
1991

Union Gas (Canada)
1991

Swanson Center
1991

1. Methylglyoxal synthase was purified over 1500-fold from glycerol-grown Escherichia coli K 12 strain CA 244. The enzyme inactivated by heat or proteolysis, had a molecular weight of approx. 67000, pH optimum 7.5 and specific for dihydroxyacetone phosphate with K(m) 0.47mm. 2. possibility that Schiff-base intermediate involved in the reaction mechanism investigated but not confirmed. 3. lost activity, especially at low temperature, could be stabilized P(i). Two binding sites P(i) may...

10.1042/bj1280321 article EN Biochemical Journal 1972-06-01

1. Intact cells of a non-fluorescent Pseudomonas grown with m-cresol, 2,5-xylenol, 3,5-xylenol, 3-ethyl-5-methylphenol or 2,3,5-trimethylphenol rapidly oxidized all these phenols to completion. 3-Hydroxybenzoate and 2,5-dihydroxybenzoate (gentisate) were also readily oxidized. 2. 3-Hydroxybenzoic acid 2,5-dihydroxybenzoic isolated as products m-cresol oxidation by inhibited alphaalpha'-bipyridyl. Alkyl-substituted 3-hydroxybenzoic acids alkyl-substituted gentisic formed similarly from...

10.1042/bj1220019 article EN Biochemical Journal 1971-03-01

A comparison of the oxidation rates various compounds by whole cells Pseudomonas putida 3, 5 indicated that m-cresol is metabolized to 3-hydroxybenzoate followed hydroxylation gentisate, ring-fission substrate, when grown with 5-xylenol. However, was growth similar experiments suggested a different pathway involving methyl-substituted catechol, and meta cleavage. Assays enzymes in cell-free extracts confirmed pathways are induced two substrates. 5-Xylenol-grown contained high levels...

10.1128/jb.122.1.1-6.1975 article EN Journal of Bacteriology 1975-04-01

p-Cresol methylhydroxylase from Pseudomonas putida, an anaerobic dehydrogenase that catalyses the oxidation of p-cresol to p-hydroxybenzyl alcohol and then p-hydroxybenzaldehyde, is enzyme great interest in several respects. One these fact its flavoprotein cytochrome c subunits may be reversibly dissociated with ease, full regeneration activity native properties on recombining components. Bisubstrate kinetic analysis unresolved gives parallel-line kinetics double-reciprocal plots, whereas...

10.1042/bj2280325 article EN Biochemical Journal 1985-06-01

Research Article| December 01 1968 Enzymic formation of D-malate D J Hopper; Hopper 1Department Biochemistry, University Minnesota, St Paul, Minn. 55101, U.S.A. Search for other works by this author on: This Site PubMed Google Scholar P Chapman; Chapman S Dagley Biochem (1968) 110 (4): 798–800. https://doi.org/10.1042/bj1100798 Views Icon Article contents Figures & tables Video Audio Supplementary Data Peer Review Share Facebook Twitter LinkedIn MailTo Cite Get Permissions Citation Hopper,...

10.1042/bj1100798 article EN Biochemical Journal 1968-12-01

The enzyme that catalyses the hydroxylation of methyl group p-cresol was purified from Pseudomonas putida. It has mol.wt. 115000 and appears to contain two subunits equal molecular weight. One subunit is a c-type cytochrome other flavoprotein. Reduction occurred on addition substrate. same both further oxidation product, 4-hydroxybenzyl alcohol. stoicheiometry acceptor reduced per molecule substrate oxidized for dehydrogenation reactions. Km 7.3 x 10(-6) M alcohol 47.6 M. enzyme, which...

10.1042/bj1670155 article EN Biochemical Journal 1977-10-01

In the hydroxylation of methyl group p-cresol by an enzyme from Pseudomonas putida oxygen atom is derived water. Although a second reaction same converts product, p-hydroxybenzyl alcohol, into aldehyde, alcohol enzyme-free intermediate.

10.1042/bj1750345 article EN Biochemical Journal 1978-10-01

10.1016/0006-291x(76)90544-1 article EN Biochemical and Biophysical Research Communications 1976-03-01

Pseudomonas putida N.C.I.B. 9869, when grown on 3,5-xylenol, hydroxylates the methyl groups 3,5-xylenol and p-cresol by two different enzymes. 3,5-Xylenol methylhydroxylase, studied only in relatively crude extracts, requires NADH, is not active with inhibited cyanide, but CO. The methylhydroxylase an electron acceptor will act under anaerobic conditions. It was purified a flavocytochrome c of mol.wt. approx. 114,000 consisting subunits equal size. enzyme catalyses hydroxylation (Km 16...

10.1042/bj1750649 article EN Biochemical Journal 1978-11-01

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXT8.alpha.-(O-Tyrosyl)flavin adenine dinucleotide, the prosthetic group of bacterial p-cresol methylhydroxylaseWilliam McIntire, Dale E. Edmondson, David J. Hopper, and Thomas P. SingerCite this: Biochemistry 1981, 20, 11, 3068–3075Publication Date (Print):May 1, 1981Publication History Published online1 May 2002Published inissue 1 1981https://pubs.acs.org/doi/10.1021/bi00514a013https://doi.org/10.1021/bi00514a013research-articleACS...

10.1021/bi00514a013 article EN Biochemistry 1981-05-01

1. Cell-free extracts, prepared from a non-fluorescent Pseudomonas grown on m-cresol, oxidized gentisate and certain alkyl-substituted gentisates with the consumption of 1 mol oxygen formation pyruvate substrate. 2. In addition to pyruvate, malate was formed gentisate; citramalate 3-methylgentisate 4-methylgentisate; 2,3-dimethylmalate 3,4-dimethylgentisate. 3. One enantiomer, d-(-)-citramalate, enzymically 3-methylgentisate, 4-methylgentisate citraconate. l-(+)-Citramalate mesaconate by...

10.1042/bj1220029 article EN Biochemical Journal 1971-03-01

1. Measurements of the rates oxidation various compounds by a fluorescent Pseudomonas indicated that metabolism 2,4-xylenol was initiated methyl group para to hydroxyl group. 2. 4-Hydroxy-3-methylbenzoic acid isolated as product cells inhibited with alphaalpha'-bipyridyl. 3. 4-Hydroxyisophthalic accumulated at low oxygen concentrations when either or 4-hydroxy-3-methylbenzoic oxidized grown 2,4-xylenol. 4. When supplemented NADH, but not NADPH, cell extracts readily....

10.1042/bj1100491 article EN Biochemical Journal 1968-12-01

The fungus Aspergillus fumigatus ATCC 28282 was shown to grow on p -cresol as its sole source of carbon and energy. A pathway for metabolism this compound proposed. This has protocatechuate the ring-fission substrate with cleavage by an ortho -fission pathway. formed two alternative routes, either initial attack methyl group, which is oxidized carboxyl, followed ring-hydroxylation, or ring-hydroxylation first step subsequent oxidation 4-methylcatechol acid. elucidated from several pieces...

10.1128/aem.59.4.1125-1130.1993 article EN Applied and Environmental Microbiology 1993-04-01

The enzyme 4-ethylphenol methylenehydroxylase was purified from Pseudomonas putida JD1 grown on 4-ethylphenol. It is a flavocytochrome c for which the Mr found to be 120,000 by ultracentrifuging and 126,000 gel filtration. consists of two flavoprotein subunits each 50,000 cytochrome 10,000. redox potential 240 mV. Hydroxylation proceeds dehydrogenation hydration give 1-(4'-hydroxyphenyl)ethanol, also dehydrogenated same 4-hydroxyacetophenone. will hydroxylate p-cresol but more active with...

10.1042/bj2630431 article EN Biochemical Journal 1989-10-15

Constitutive synthesis of enzymes responsible for methyl group oxidation in 3,5-xylenol degradation and an associated p-cresol methylhydroxylase Pseudomonas putida NCIB 9869 was shown by their retention at high specific activities cells transferred from medium to glutamate medium. The other the pathway declined upon removal aromatic substrate, consistent with inducible control. Specific methyl-oxidizing showed eventual decline concomitant a decrease fraction bacteria capable growth...

10.1128/jb.142.1.21-26.1980 article EN Journal of Bacteriology 1980-04-01

Three independent mechanisms are described that contaminate the phase-modulated pump beam of an optical frequency reference stabilized by modulation transfer spectroscopy (MTS) with residual amplitude (RAM). The electro-optic modulator, geometry and absorption saturated medium all separately generate undesired RAM degrades accuracy reference. An analysis is presented shows how shifts introduced different can be evaluated in typical MTS set-ups minimized. also detector phase used to measure...

10.1088/0957-0233/20/2/025302 article EN Measurement Science and Technology 2008-12-30

A bacterium, strain PC-07, previously isolated as part of a coculture capable growing on p-cresol under anaerobic conditions with nitrate the acceptor was identified an Achromobacter sp. The first enzyme pathway, methylhydroxylase, which converts its substrate into p-hydroxybenzyl alcohol, purified. had Mr 130,000 and spectrum flavocytochrome. It composed flavoprotein subunits 54,000 cytochrome 12,500. midpoint redox potential 232 mV. Km kcat for were 21 microM 112 s-1 respectively,...

10.1128/jb.173.3.1298-1301.1991 article EN Journal of Bacteriology 1991-02-01

SUMMARY: A bacterium capable of growth on 4-ethylphenol was isolated from soil and identified as Pseudomonas putida. Intact cells grown rapidly oxidized 4-hydroxyaceto-phenone well substrate the also 4-hydroxyacetophenone. The initial enzymes for catabolism were still present, although at lower activities, in succinate-grown which to Extracts 4-ethylphenol-grown 4-hydroxyacetophenone when provided with NADPH. When this activity partially purified a stoichiometry 1 μmol O2 consumed per...

10.1099/00221287-133-8-2137 article EN Microbiology 1987-08-01

Enzymic hydroxylation of 4-ethylphenol by (a) Pseudomonas putida and (b) highly purified p-cresol methylhydroxylase gave optically active 1-(4′-hydroxyphenyl)-ethanol. The products were transformed into the phenolic methyl ethers shown to contain 69.5% 65.6%, respectively, (S)-(-)-isomer. stereochemistry reaction is discussed in terms three distinct steps occurring at site enzyme.

10.1042/bj2240617 article EN Biochemical Journal 1984-12-01

Extracts of a fluorescent species Pseudomonas grown with m -cresol, degrade gentisic acid without isomerization the ring-fission compound, maleylpyruvate, to give eventually d -malate and pyruvate. -Malate is also growth substrate. l but not oxidized by particulate enzyme requiring nicotinamide adenine dinucleotide (NAD) or phosphate (NADP). NAD- NADP-linked malate dehydrogenases are absent cells contain an NADP-dependent -malic enzyme. Exposure exogenous induces NAD-dependent enzyme,...

10.1128/jb.104.3.1197-1202.1970 article EN Journal of Bacteriology 1970-12-01

The electrochemistry of the enzyme, sulfide:cytochrome c oxidoreductase, also known as flavocytochrome c552 from purple sulfur bacterium, Chromatium vinosum, has been studied using several modified electrodes. Direct electron transfer between heme and an electrode is observed in presence a redox-inactive cationic species which promotes voltammetry enzyme. Quasi-reversible was achieved aminoglycoside, neomycin, promoter at either gold or polished edge-plane graphite electrode. Further...

10.1016/s0021-9258(19)39925-9 article EN cc-by Journal of Biological Chemistry 1990-02-01
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