Benjamin J. Nichols

ORCID: 0000-0001-5392-7182
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About
Contact & Profiles
Research Areas
  • Caveolin-1 and cellular processes
  • Cellular transport and secretion
  • Lipid Membrane Structure and Behavior
  • Erythrocyte Function and Pathophysiology
  • Ion Transport and Channel Regulation
  • Metabolism, Diabetes, and Cancer
  • Glycosylation and Glycoproteins Research
  • Fungal and yeast genetics research
  • RNA Research and Splicing
  • Blood properties and coagulation
  • Lipid metabolism and disorders
  • Endoplasmic Reticulum Stress and Disease
  • Biochemical Acid Research Studies
  • RNA Interference and Gene Delivery
  • Protein Structure and Dynamics
  • Metabolism and Genetic Disorders
  • Sphingolipid Metabolism and Signaling
  • Mitochondrial Function and Pathology
  • Barrier Structure and Function Studies
  • Ion channel regulation and function
  • Enzyme Catalysis and Immobilization
  • Microtubule and mitosis dynamics
  • Microbial Metabolic Engineering and Bioproduction
  • Analytical Chemistry and Chromatography
  • Cellular Mechanics and Interactions

MRC Laboratory of Molecular Biology
2009-2022

Medical Research Council
1997-2018

University of Cambridge
2015

Eunice Kennedy Shriver National Institute of Child Health and Human Development
2004

National Institutes of Health
2001-2004

Dartmouth College
1998

University of Bristol
1992-1995

The endocytic itineraries of lipid raft markers, such as glycosyl phosphatidylinositol (GPI)-anchored proteins and glycosphingolipids, are incompletely understood. Here we show that different GPI-anchored have intracellular distributions; some (such the folate receptor) accumulate in transferrin-containing compartments, others CD59 GPI-linked green fluorescent protein [GFP]) Golgi apparatus. Selective photobleaching shows pool both GPI-GFP CD59-GFP constantly rapidly exchanges with these...

10.1083/jcb.153.3.529 article EN The Journal of Cell Biology 2001-04-30

Lipid rafts are conceptualized as membrane microdomains enriched in cholesterol and glycosphingolipid that serve platforms for protein segregation signaling. The properties of these domains vivo unclear. Here, we use fluorescence recovery after photobleaching to test if raft association affects a protein's ability laterally diffuse large distances across the cell surface. diffusion coefficients (D) several types putative nonraft proteins were systematically measured under steady-state...

10.1083/jcb.200312170 article EN The Journal of Cell Biology 2004-06-01

Flotillins are membrane proteins that form microdomains in the plasma of all mammalian cell types studied to date. They span evolutionary spectrum, with related flotillins present bacteria, fungi, plants and metazoans, which suggests they perform important, probably conserved, functions. have been implicated myriad processes include endocytosis, signal transduction regulation cortical cytoskeleton, yet molecular mechanisms underlie flotillin function these different cases still poorly...

10.1242/jcs.092015 article EN Journal of Cell Science 2011-12-01

Several different endocytic pathways have been proposed to function in mammalian cells. Clathrin-coated pits are well defined, but the identity, mechanism and of alternative controversial. Here we apply universal chemical labelling plasma membrane proteins define all primary vesicles, specific with a reducible SNAP-tag substrate. These approaches provide high temporal resolution stringent discrimination between surface-connected intracellular membranes. We find that at least 95% earliest...

10.7554/elife.03970 article EN cc-by eLife 2014-09-16

Many endocytosed proteins in yeast travel to the vacuole, but some are recycled plasma membrane. We have investigated recycling of chimeras containing green fluorescent protein (GFP) and exocytic SNARE Snc1p. GFP-Snc1p moves from cell surface internal structures when Golgi function or exocytosis is blocked, suggesting continuous via Golgi. Internalization mediated by a conserved cytoplasmic signal, whereas diversion vacuolar pathway requires sequences within adjacent transmembrane domain....

10.1091/mbc.11.1.23 article EN Molecular Biology of the Cell 2000-01-01

Homotypic vacuole fusion in yeast requires Sec18p (N-ethylmaleimide–sensitive protein [NSF]), Sec17p (soluble NSF attachment [α-SNAP]), and typical vesicle (v) target membrane (t) SNAP receptors (SNAREs). We now report that vacuolar v- t-SNAREs are mainly found with as v–t-SNARE complexes vivo on purified vacuoles rather than only transiently forming such during docking, disrupting them upon fusion. In the priming reaction, ATP dissociate this complex, accompanied by release of Sec17p. SNARE...

10.1083/jcb.140.1.61 article EN The Journal of Cell Biology 1998-01-12

Dishevelled is a crucial effector upstream in the Wnt signalling pathway, but molecular mechanism by which it transduces signal remains elusive. cytoplasmic protein with strong tendency to form puncta, correlates its potent activity stimulating transduction when overexpressed. These puncta are thought reflect vesicles. However, we show here that mammalian Dvl2 does not colocalise known vesicle markers for clathrin-mediated or clathrin-independent endocytic pathways. Furthermore, do stain...

10.1242/jcs.02646 article EN Journal of Cell Science 2005-11-02

Caveolae are an abundant feature of the plasma membrane many mammalian cell types, and have key roles in mechano-transduction, metabolic regulation, vascular permeability. Caveolin cavin proteins, as well EHD2 pacsin 2, all present caveolae. How these proteins assemble to form a protein interaction network for caveolar morphogenesis is not known. Using vivo crosslinking, velocity gradient centrifugation, immuno-isolation, tandem mass spectrometry, we determine that cavins caveolins into...

10.1371/journal.pbio.1001640 article EN cc-by PLoS Biology 2013-08-27

The pacsin (also termed syndapin) protein family is well characterised structurally. They contain F-BAR domains associated with the generation or maintenance of membrane curvature. cell biology these proteins remains less understood. Here, we initially confirm that EHD2, a previously shown biochemically to be present in caveolar fractions and bind pacsins, protein. We go on report GFP–pacsin 2 can recruited caveolae, endogenous partially colocalises caveolin 1 at plasma membrane. Analysis...

10.1242/jcs.084319 article EN Journal of Cell Science 2011-08-01

Caveolae are abundant in endothelial cells and thought to have important roles cell biology. The cavin proteins key components of caveolae, expressed at varied amounts different tissues. Here we use knockout mice determine the cavins 2 3 caveolar morphogenesis vivo. Deletion causes loss caveolae lung adipose tissue, but has no effect on abundance heart other Changes morphology endothelium null correlate with changes abundance. Cavin is not required for making tissues examined. determines...

10.1038/ncomms2808 article EN cc-by-nc-sa Nature Communications 2013-05-07

Caveolae are strikingly abundant in endothelial cells, yet the physiological functions of caveolae endothelium and other tissues remain incompletely understood. Previous studies suggest a mechanoprotective role, but whether this is relevant under mechanical forces experienced by cells vivo unclear. In study we have sought to determine disassemble increased hemodynamic forces, help prevent acute rupture plasma membrane these conditions. Experiments cultured established biochemical assays for...

10.1083/jcb.201504042 article EN The Journal of Cell Biology 2015-10-12

Abstract Caveolae have long been implicated in endocytosis. Recent data question this link, and the absence of specific cargoes potential cellular function caveolar endocytosis remains unclear. Here we develop new tools, including doubly genome-edited cell lines, to assay subcellular dynamics caveolae using tagged proteins expressed at endogenous levels. We find that around 5% pool is present on dynamic endosomes, delivered endosomes a clathrin-independent manner. Furthermore, show are...

10.1038/ncomms7867 article EN cc-by Nature Communications 2015-04-21

10.1016/s0960-9822(03)00209-4 article EN publisher-specific-oa Current Biology 2003-04-01

Flotillin-1 and flotillin-2 co-assemble into plasma membrane microdomains that are involved in the endocytosis of molecules such as glycosyl phosphatidylinositol (GPI)-linked proteins. Previous studies suggest budding flotillin from is a tightly regulated process. Here, we demonstrate flotillins by Src family kinase Fyn. The inhibitor PP2 prevents EGF-induced internalisation, internalisation does not occur SYF cells lacking Src, Yes Expression Fyn, but or Yes, restores cells. an active form...

10.1242/jcs.039024 article EN Journal of Cell Science 2009-03-04
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