Biologists often set out to find relevant data in an ever-changing landscape of interesting databases. While leading journals publish descriptions databases, they are usually not recent and do frequently update the list that discards defunct or poor-quality These indices include databases proactively requested be included by their authors. The challenge for individual biologists, then, is discover, explore, select interest from a large unorganized collection effectively use them analysis...

As large language models (LLMs) continue to evolve, their capacity replace humans as surrogates is also improving. increasing numbers of intelligent tutoring systems (ITSs) are embracing the integration LLMs for digital tutoring, questions arising how effective they and if hallucinatory behaviors diminish perceived advantages. One critical question that seldom asked availability, plurality, relative weaknesses in reasoning process contributing much discussed divide equity fairness online...

We propose the use of application semantics to enhance process semantic reconciliation. Application involves those elements business reasoning that affect way concepts are presented users: their layout, and so on. In particular, we pursue in this article notion precedence, which temporal constraints determine order user. Existing matching algorithms either syntactic means (such as term domain matching) or model means, structural information is provided by specific data process. The novelty...

The prevalence of diabetes is increasing worldwide. It has been long known that increased rates inflammatory diseases, such as obesity (OBS), hypertension (HT) and cardiovascular diseases (CVD) are highly associated with type 2 (T2D). T2D and/or OBS can develop independently, due to genetic, behavioral or lifestyle-related variables but both lead oxidative stress generation. underlying mechanisms by which theses complications arise manifest together remain poorly understood. Protein-protein...

An understanding of the molecular basis musculoskeletal pain is necessary for development therapeutics, their management, and possible personalization. One-in-three Americans use OTC killers, one tenth prescription drugs to manage pain. The CDC also estimates that about 20% suffer from chronic As experience acute or varies due individual genetics physiology, it imperative researchers continue find novel therapeutics treat symptoms. In this paper, our goal develop a seed knowledgebase...

Quality scientific inquiries depend on access to data distributed over the entire globe. Linked open (LOD) and FAIRness play major roles in ensuring that scientists need answer interesting questions. However, a model query language compute responses complex remain outstanding. As recent emergence of large models (LLM) reshape how we interact with machines, an intriguing prospect posing smart machines suddenly appears realizable which natural ChatBot is empowered LOD knowledgebase as its...

Ontologies, formal specifications of domains, have evolved in recent years as a leading tool representing and interpreting Web data. The OntoBuilder project supports the extraction ontologies from search interfaces, ranging simple engine forms to multiple-pages, complex reservation systems. enables fully-automatic ontology matching. use ontologies, opposed relational schema or XML, an underlying data model allows flexible representation metadata, that can be tailored many different types...

Many emerging database applications entail sophisticated graph-based query manipulation, predominantly evident in large-scale scientific applications. To access the information embedded graphs, efficient graph matching tools and algorithms have become of prime importance. Although prohibitively expensive time complexity associated with exact subgraph isomorphism techniques has limited its efficacy application domain, approximate yet received much attention due to their pragmatic...

The task of generating SQL queries from natural language questions has long been a challenge for researchers, particularly in the context teaching and tutoring database students. Existing efforts have yielded limited success, especially when it comes to assessing student assignments automatically. discrepancy arises fact that students' query solutions may differ significantly those instructors, despite producing identical results. conventional approach determining correctness relies on...

Aberrant microRNA activity has been reported in many diseases, and studies often find numerous microRNAs concurrently dysregulated. Most target genes have binding sites for multiple microRNAs, mounting evidence indicates that it is important to consider their combinatorial effect on gene repression. A recent study associated the coincident loss of expression six with metastatic potential breast cancer. Here, we used a new computational method, miR-AT!, investigate among this group microRNAs....

One of the major hurdles toward automatic semantic understanding computer programs is lack knowledge about what constitutes functional equivalence code segments. We postulate that a sound knowledgebase can be used to deductively understand segments in hierarchical fashion by first de-constructing and then reconstructing it from elementary rules The approach also engineered produce computable conceptual abstract algorithms as an inverse function. In this paper, we introduce core idea behind...

Biological data analyses usually require complex manipulations involving tool applications, multiple web site navigation, result selection and filtering, iteration over the internet. Most biological are generated from structured databases by applications presented to users embedded within repeated structures, or tables, in HTML documents. In this paper we outline a novel technique for identification of table structures This is then used automatically generate composite wrappers requiring...

Scientific workflows in Life Sciences are usually complex, and use many online databases, analysis tools, publication repositories customized computation intensive desktop software a coherent manner to respond investigative queries. These queries generally ad hoc, ill-formed, often, used only once test single hypothesis. In such cases, developing becomes major undertaking, rendering the effort truly expensive, prohibitive resource intensive. Such high development costs often act as...

Traditional schema matchers use a set of distinct simple and composition function to combine the individual scores using an arbitrary order matcher application leading non-intuitive scores, produce improper matches, wasteful counterproductive computation, especially when no consideration is given properties context application. In this paper, we propose new method for matching in which computation avoided by prudent, objective selection ordering subset useful matchers. This thus has...

Graphs and trees play a major role in many applications including social networks, internet management, science, business. Yet, there remains serious lack of tools for graph data analysis querying. Systems that rely on non-traditional complex relationships among objects naturally invite fresh look at models query languages suitable require graphs as first class citizens. In this paper, we propose new model the storage management objects, present heuristic algorithm to efficiently compute...

A simple way to assess the correctness of a student's SQL query is compare results with correct for equality. Technically, two queries will produce identical responses only if they are computationally equivalent. Until recently, establishing such equality largely tested set returned at great computational cost not enough confidence. In most e-Learning systems, providing feedback improve learning has remained illusive in setup where no semantic foundation was used query. this paper, we...

Scientific workflow design is usually complex and demands access to integration of numerous non-conventional resources. Geographical distribution semantic heterogeneity these resources add this complexity. The cost effectiveness such design, thus, depends upon the lifespan application its anticipated use. Shorter entails prohibitive development costs. In paper, we present an alternative platform for declarative using BioFlow in environments. being developed as query language a scientific...

The deep web is very large and diverse queries evaluated against the can provide great value. While there have been attempts at accessing data in web, these are clever "one-of'' systems techniques. In this paper, we describe an ongoing research of a generic structured query model that be used web. Using model, contributions community researchers combined freely, leading to system improved incrementally each time someone develops specific novel technique improve particular operator.