A5022693086- Genomics and Phylogenetic Studies
- Genetic diversity and population structure
- Plant Pathogens and Fungal Diseases
- Plant and Fungal Species Descriptions
- Plant Pathogens and Resistance
- Plant Genetic and Mutation Studies
- Ecology and Conservation Studies
- Plant tissue culture and regeneration
- Plant Water Relations and Carbon Dynamics
- Phytochemistry and Biological Activities
- Tree-ring climate responses
- Identification and Quantification in Food
- Molecular Biology Techniques and Applications
- Botany and Plant Ecology Studies
- Ecology and Vegetation Dynamics Studies
- Plant Taxonomy and Phylogenetics
- Botany, Ecology, and Taxonomy Studies
- Plant Diversity and Evolution
- Medicinal Plant Research
- Traditional Chinese Medicine Analysis
- Lichen and fungal ecology
- Plant Disease Resistance and Genetics
Nanjing Forestry University
2018-2024
State Forestry and Grassland Administration
2019-2024
Chinese lacquer tree ( Toxicodendron vernicifluum ) is an important commercial arbor species widely cultivated in East Asia for producing highly durable lacquer. Here, we sequenced and analyzed the complete chloroplast (cp) genome of T. reconstructed phylogeny Sapindales based on 52 cp genomes six families. The plastome 159,571 bp length, including a pair inverted repeats (IRs) 26,511 bp, separated by large single-copy (LSC) region 87,475 small (SSC) 19,074 bp. A total 126 genes were...
Abstract Shared ancestral polymorphism and introgression are two main causes of chloroplast DNA (cpDNA) haplotype sharing among closely related angiosperms. In this study, we explored the roles these processes in shaping phylogeographic patterns East Asian Cerris oaks by examining geographic distributions randomly locally distributed shared haplotypes, which coincide with expectations ancestry introgression, respectively. We sequenced 1340 bp non‐coding cpDNA from Quercus acutissima ( n =...
Chinese lacquer tree (Toxicodendron vernicifluum) is an important commercial arbor species known for the production of raw lacquer. Here, we investigated intraspecific chloroplast (cp) genome variability T. vernicifluum using two available and five newly sequenced cp genomes. We found that each seven genomes encoded 87 protein-coding genes, 37 tRNA eight rRNA genes. Phylogenetic analyses based on genes indicated four individuals from western China formed a monophyletic group sister to...
Evergreen sclerophyllous oak forests (ESOFs) in southwestern China are a special vegetation type developed response to the expansion of arid habitats after uplift Himalayas. Here, we used chloroplast (cp) DNA and nuclear ribosomal (nr) investigate fine-scale genetic variation patterns six sympatric oaks (Quercus, Fagaceae) hot-dry valley ESOFs Jinsha River, China. Three cp genomes were assembled for each species. Nine genome haplotypes 16 nrDNA identified based on single-nucleotide variants...
Toxicodendron succedaneum (L.) Kuntze is a deciduous and dioecious tree species in the family Anacardiaceae with important economic values. In this study, we sequenced analyzed complete chloroplast (cp) genome of T. succedaneum. The circular 159,710 bp size, presents quadripartite structure including two copies inverted repeat (IR) regions 26,524 bp, one large single-copy (LSC) region 87,622 small (SSC) 19,040 bp. It encodes total 113 unique genes, 80 protein-coding 29 tRNA four rRNA genes....
Calcium and magnesium are major nutrient elements of plants, both play an important role in plant growth development. Pinus massoniana P. hwangshanensis afforestation tree species barren mountains China. However, observation research on calcium nutrition dominant forest China still limited. This study determined the concentration needles for two from five sites East by inductively coupled plasma optical emission spectrometry (ICP-OES). We then explored inter- intra-population variation...
Quercus myrsinifolia Blume is an evergreen oak tree species native to East Asia, and also one of the dominant trees subtropical broad-leaved forests. In this study, we sequenced analysed complete chloroplast (cp) genome species. The circular 160,803 bp in size, consisting two copies inverted repeat (IR) regions 25,840 bp, large single-copy (LSC) region 90,223 small (SSC) 18,900 bp. It encodes a total 114 unique genes, including 80 protein-coding 30 tRNA four rRNA genes. Phylogenetic analysis...
Quercus ciliaris C.C.Huang & Y.T.Chang is one of the dominant tree species in subtropical evergreen broad-leaved forests China. In this study, we sequenced and analyzed complete chloroplast (cp) genome species. The circular 160,842 bp size, consisting two copies inverted repeat (IR) regions 25,823 bp, large single-copy (LSC) region 90,294 small (SSC) 18,902 bp. It encodes a total 114 unique genes, including 80 protein-coding 30 tRNA four rRNA genes. Phylogenetic analysis based on cp...
Toxicodendron sylvestre (Siebold & Zucc.) Kuntze is a deciduous tree species in the poison ivy genus of sumac family. In this study, we sequenced and analyzed complete chloroplast (cp) genome T. sylvestre. The circular 159,600 bp length, including two copies inverted repeat (IR) regions 26,465 bp, one large single-copy (LSC) region 87,630 small (SSC) 19,040 bp. It encodes total 113 unique genes, 80 protein-coding 29 tRNA 4 rRNA genes. Phylogenetic analysis based on 17 cp sequences revealed...
Quercus stewardiana A.Camus is an East Asian evergreen oak tree species belonging to section Cyclobalanopsis. In this study, we assembled and annotated the complete chloroplast (cp) genome of species. The circular 160,842 bp in size, presenting a typical quadripartite structure including two copies inverted repeat (IR) regions (25,823 bp), one large single-copy (LSC) region (90,294 small (SSC) (18,902 bp). It encodes total 114 unique genes, 80 protein-coding 30 tRNA four rRNA genes....
Distylium macrophyllum H.T.Chang is a critically endangered tree species endemic to southern China. In this study, we assembled and characterized the plastome of D. using Illumina paired-end data. The circular genome 159,089 bp in size, consisting two copies inverted repeat (IR) regions 26,235 bp, one large single-copy (LSC) region 87,822 small (SSC) 18,797 bp. It encodes total 114 unique genes, including 80 protein-coding 30 tRNA four rRNA genes. Phylogenetic analysis based on 13 cp...
Distylium tsiangii Chun ex Walker is an evergreen tree species endemic to China. It has been classified as critically endangered in the Red List of China Higher Plants. Here, we sequenced, assembled, and analyzed complete chloroplast (cp) genome D. tsiangii. The plastome 159,125 bp length, with a typical quadripartite structure consisting pair inverted repeat (IR) regions (26,220 bp) separated by large single copy (LSC) region (87,897 small (SSC) (18,788 bp). overall GC content was 38.00%. A...