Timothy C. Wallstrom

ORCID: 0000-0002-9295-2441
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About
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Research Areas
  • Advanced Mathematical Modeling in Engineering
  • Probabilistic and Robust Engineering Design
  • HIV Research and Treatment
  • Advanced Thermodynamics and Statistical Mechanics
  • Advanced Statistical Methods and Models
  • Risk and Safety Analysis
  • Statistical Mechanics and Entropy
  • Advanced Numerical Methods in Computational Mathematics
  • Nuclear reactor physics and engineering
  • Quantum Mechanics and Applications
  • Bayesian Modeling and Causal Inference
  • Advanced Statistical Process Monitoring
  • Evolution and Genetic Dynamics
  • vaccines and immunoinformatics approaches
  • Hydraulic Fracturing and Reservoir Analysis
  • Stochastic processes and financial applications
  • Nuclear Materials and Properties
  • Fault Detection and Control Systems
  • Markov Chains and Monte Carlo Methods
  • Twentieth Century Scientific Developments
  • Mathematical Biology Tumor Growth
  • Gaussian Processes and Bayesian Inference
  • Enhanced Oil Recovery Techniques
  • Composite Material Mechanics
  • Theoretical and Computational Physics

Los Alamos National Laboratory
2007-2023

Massachusetts Institute of Technology
1997-2003

Catholic University of America
1997-2003

Princeton University
1989-1990

Arcadia
1990

Stanford University
1981

We used ultra-deep sequencing to obtain tens of thousands HIV-1 sequences from regions targeted by CD8+ T lymphocytes longitudinal samples three acutely infected subjects, and modeled viral evolution during the critical first weeks infection. Previous studies suggested that a single virus established productive infection, but these conclusions were tempered because limited sampling; now, we have greatly increased our confidence in this observation through modeling observed earliest sample...

10.1371/journal.pone.0012303 article EN cc-by PLoS ONE 2010-08-20

By differentiating the Schr\"odinger equation and separating real amd imaginary parts, one obtains Madelung hydrodynamic equations, which have inspired numerous classical interpretations of quantum mechanics. Such frequently assume that these equations are equivalent to equation, thus provide an alternative basis for This paper proves this is incorrect: recover must add by hand a quantization condition, as in old theory. The implications various mechanics discussed.

10.1103/physreva.49.1613 article EN Physical Review A 1994-03-01

An effective AIDS vaccine must control highly diverse circulating strains of human immunodeficiency virus type 1 (HIV-1). Among HIV-1 gene products, the envelope (Env) protein contains variable as well conserved regions. In this report, an informatic approach to design T-cell vaccines directed Env M group global sequences was tested. Synthetic antigens were designed express mosaics that maximize inclusion common potential epitope (PTE) 9-mers and minimize rare epitopes likely elicit...

10.1128/jvi.02256-08 article EN Journal of Virology 2008-12-25

A combinatorial definition of multiple stochastic integrals is given in the setting random measures. It shown that some properties such integrals, formerly known to hold special cases, are instances identities on lattice partitions a set. The notion sequences binomial type introduced as generalization polynomial occuring integration, Hermite, Poisson–Charlier and Kravchuk polynomials. for sets have common origin.

10.1214/aop/1024404513 article EN The Annals of Probability 1997-07-01

Existing stochastic models of unsaturated flow and transport are usually developed using the simple Gardner‐Russo constitutive relationship though it is generally accepted that more complex van Genuchten Brooks‐Corey relationships may perform better in describing experimental data. In this paper, we develop first‐order for gravity‐dominated second‐order stationary media with both relationships. These also account spatial variability effective water content, while neglected most existing...

10.1029/98wr00317 article EN Water Resources Research 1998-06-01

10.1023/a:1015075210265 article EN Transport in Porous Media 2002-01-01

ABSTRACT The objective of this study was to estimate and compare the evolutionary rates HIV-2 HIV-1. Two data sets from patients with advanced disease were compared matched HIV-1 sets. estimated mean rate significantly higher than HIV-1, both in gp125 V3 region env gene. In addition, synonymous substitutions for possibly indicating a shorter generation time or mutation HIV-2. Thus, lower virulence does not appear translate into evolution.

10.1128/jvi.02548-09 article EN Journal of Virology 2010-05-13

10.1016/j.ress.2011.01.001 article EN Reliability Engineering & System Safety 2011-04-15

10.1023/a:1011570724061 article EN Annals of Software Engineering 1999-01-01

We consider a Polya urn, started with b black and w white balls, where b>w. compute the probability that there are ever same number of balls in show it is twice getting no more than w-1 heads b+w-1 tosses fair coin.

10.4169/amer.math.monthly.119.06.516 article EN American Mathematical Monthly 2012-01-01

Abstract This paper describes further development and testing of the Renormalization Nonuniform Coarsening (RNC) scale up algorithm, which was recently introduced in Ref. 13. RNC combines nonuniform coarsening with upscaling absolute relative permeabilities to provide coarsened descriptions two-phase immiscible flow. We diagnose a known bias algorithm used RNC. An unbiased alternative is incorporated into up. The modified tested on displacements through two dimensional cross sections...

10.2118/51939-ms article EN All Days 1999-02-14

Abstract This report is an overview of two main publications that provide a comprehensive review the Los Alamos National Laboratory (LANL) Fission Basis. The first experimental paper, “Fission Product Data Measured at for Spectrum and Thermal Neutrons on 239Pu, 235U, 238U,” [Selby, H. D., et al., Nucl. Sheets, Vol. 111 2010, pp. 2891–2922] second theoretical Yields from n+239Pu ENDF/B-VII.1,” [Chadwick, M. B., 111, 2923–2964].

10.1520/jai103974 article EN Journal of ASTM International 2012-03-01

In stochastic mechanics, the Bopp-Haag-Dankel diffusions on <inline-formula content-type="math/mathml"> <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" alttext="double-struck upper R cubed times S O left-parenthesis 3 right-parenthesis"> <mml:semantics> <mml:mrow> <mml:mrow class="MJX-TeXAtom-ORD"> <mml:msup> <mml:mi mathvariant="double-struck">R</mml:mi> </mml:mrow> <mml:mn>3</mml:mn> </mml:msup> <mml:mo>×<!-- × --></mml:mo> <mml:mi>SO</mml:mi> <mml:mo>⁡<!-- ⁡ <mml:mo...

10.1090/s0002-9947-1990-0986033-3 article EN Transactions of the American Mathematical Society 1990-01-01

We prove new results for general weak solutions of the incompressible Navier-Stokes equations on three-dimensional torus, without using strong energy inequality or other regularity assumptions. Specifically, we two types differential equalities, in which $(d/dt)\lVert u\rVert^2$ is replaced by $2\langle \partial_t u,u\rangle$ and $\lim_{N\rightarrow\infty}(d/dt)\lVert u_N\rVert^2$, where $u_N$ are projections original solution $u$. also provide a characterization Leray-Hopf solutions, as...

10.48550/arxiv.2401.13899 preprint EN other-oa arXiv (Cornell University) 2024-01-01

The phase transition for turbulent diffusion, reported by Avellaneda and Majda [Avellaneda, M. &amp; Majda, A. J. (1994) Philos. Trans. R. Soc. London A 346, 205-233, several earlier papers], is traced to a modeling assumption in which the energy spectrum of fluid singularly dependent on viscosity inertial range. Phenomenological models turbulence intermittency, contrast, require that be independent When assumed consistent with phenomenological models, there no diffusion.

10.1073/pnas.92.24.11005 article EN Proceedings of the National Academy of Sciences 1995-11-21

In stochastic mechanics, the Bopp-Haag-Dankel diffusions on ${\mathbb {R}^3} \times \operatorname {SO} (3)$ are used to represent particles with spin. Bopp and Haag showed that in limit as particle’s moment of inertia $I$ goes zero, solutions Bopp-Haag equations converge regular Pauli equation. Nelson has conjectured same limit, projections onto {R}^3}$ a Markovian process. this paper, we prove conjecture for spin $\operatorname {spin} \;\tfrac {1} {2}$ potentials, identify process...

10.2307/2001329 article EN Transactions of the American Mathematical Society 1990-04-01

McDiarmid's inequality has recently been proposed as a tool for setting margin requirements complex systems. If $F$ is the bounded output of system, depending on vector $n$ inputs, this provides bound $B_F(\epsilon)$, such that probability deviation exceeding $B_F(\epsilon)$ less than $\epsilon$. I compare with absolute bound, based range $F$. show when $n_{eff}$, effective number independent variates, small, and $\epsilon$ smaller while also providing i.e., zero instead Thus, to be useful,...

10.1137/130933125 article EN cc-by SIAM/ASA Journal on Uncertainty Quantification 2017-01-01
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