Carles Calatayud

ORCID: 0000-0003-0032-4198
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About
Contact & Profiles
Research Areas
  • Pluripotent Stem Cells Research
  • CRISPR and Genetic Engineering
  • Parkinson's Disease Mechanisms and Treatments
  • Retinal Development and Disorders
  • Olfactory and Sensory Function Studies
  • Cellular transport and secretion
  • Nuclear Receptors and Signaling
  • Neurobiology and Insect Physiology Research
  • Neuroscience and Neuropharmacology Research
  • Alzheimer's disease research and treatments
  • Autophagy in Disease and Therapy
  • Single-cell and spatial transcriptomics
  • Nerve injury and regeneration
  • Neuroscience and Neural Engineering
  • Neurological disorders and treatments
  • MicroRNA in disease regulation
  • Adipose Tissue and Metabolism
  • Advanced Memory and Neural Computing
  • Mesenchymal stem cell research
  • Genetics and Neurodevelopmental Disorders
  • RNA regulation and disease
  • Genetic Neurodegenerative Diseases
  • Pancreatic function and diabetes
  • Neuroinflammation and Neurodegeneration Mechanisms
  • Animal Genetics and Reproduction

KU Leuven
2023-2025

VIB-KU Leuven Center for Brain & Disease Research
2020-2025

Allen Institute for Brain Science
2023-2025

VIB-KU Leuven Center for Microbiology
2024

Universitat de Barcelona
2017-2023

Institut de Biomedicina de la Universitat de Barcelona
2019-2023

Center of Regenerative Medicine in Barcelona
2017-2023

Duran i Reynals Hospital
2019-2023

Bellvitge University Hospital
2018-2023

Institut d'Investigació Biomédica de Bellvitge
2018-2023

Parkinson's disease (PD) is associated with the degeneration of ventral midbrain dopaminergic neurons (vmDAns) and accumulation toxic α-synuclein. A non-cell-autonomous contribution, in particular astrocytes, during PD pathogenesis has been suggested by observational studies, but remains to be experimentally tested. Here, we generated induced pluripotent stem cell-derived astrocytes from familial mutant LRRK2 G2019S patients healthy individuals. Upon co-culture on top control vmDAns...

10.1016/j.stemcr.2018.12.011 article EN cc-by Stem Cell Reports 2019-01-10
Caroline B. Pantazis Andrian Yang Erika Lara Justin A. McDonough Cornelis Blauwendraat and 90 more Lirong Peng Hideyuki Oguro Jitendra Kumar Kanaujiya Jizhong Zou David P. Sebesta Gretchen Pratt Erin Cross Jeffrey Blockwick Philip Buxton Lauren Kinner-Bibeau Constance Medura Christopher Tompkins Stephen H. Hughes Marianita Santiana Faraz Faghri Mike A. Nalls Dan Vitale Shannon L. Ballard Yue Qi Daniel M. Ramos Kailyn Anderson Julia T. Stadler Priyanka Narayan Jason Papademetriou Luke Reilly Matthew P. Nelson Sanya Aggarwal Leah U. Rosen Peter Kirwan Venkat Pisupati Steven L. Coon Sonja W. Scholz Theresa Priebe Miriam Öttl Jian Dong Marieke Meijer Lara J.M. Janssen Vanessa S. Lourenco Rik van der Kant Dennis Crusius Dominik Paquet Ana‐Caroline Raulin Guojun Bu Aaron Held Brian J. Wainger Rebecca Gabriele Jackie M. Casey Selina Wray Dad Abu-Bonsrah Clare L. Parish Melinda S. Beccari Don W. Cleveland Emmy Li Indigo V.L. Rose Martin Kampmann Carles Calatayud Patrik Verstreken Laurin Heinrich Max Y. Chen Birgitt Schüle Dan Dou Erika L.F. Holzbaur Maria Clara Zanellati Richa Basundra Mohanish Deshmukh Sarah Cohen Richa Khanna Malavika Raman Zachary S. Nevin Madeline Matia Jonas Van Lent Vincent Timmerman Bruce R. Conklin Katherine Johnson Chase Ke Zhang Salome Funes Daryl A. Bosco Lena Erlebach Marc Welzer Deborah Kronenberg‐Versteeg Guochang Lyu Ernest Arenas Elena Coccia Lily Sarrafha Tim Ahfeldt John C. Marioni William C. Skarnes Mark Cookson Michael E. Ward Florian T. Merkle

Human induced pluripotent stem cell (iPSC) lines are a powerful tool for studying development and disease, but the considerable phenotypic variation between makes it challenging to replicate key findings integrate data across research groups. To address this issue, we sub-cloned candidate human iPSC deeply characterized their genetic properties using whole genome sequencing, genomic stability upon CRISPR-Cas9-based gene editing, including differentiation commonly used types. These studies...

10.1016/j.stem.2022.11.004 article EN cc-by Cell stem cell 2022-12-01

Pathogenic α-synuclein and tau are critical drivers of neurodegeneration, their mutations cause neuronal loss in patients. Whether the underlying preferential vulnerability is a cell-type-intrinsic property or consequence increased expression levels remains elusive. Here, we explore cell-type-specific human brain datasets use deep phenotyping as well brain-wide single-cell RNA sequencing >200 live neuron types fruit flies to determine which cellular environments react most toxicity. We...

10.1016/j.neuron.2023.02.033 article EN cc-by-nc-nd Neuron 2023-03-21

Neuronal activity causes use-dependent decline in protein function. However, it is unclear how this coupled to local quality control mechanisms. We show Drosophila that the endocytic Endophilin-A (EndoA) connects activity-induced calcium influx synaptic autophagy and neuronal survival a Parkinson disease-relevant fashion. Mutations disordered loop, including disease-risk mutation, render EndoA insensitive stimulation affect dynamics: when more flexible, its mobility membrane nanodomains...

10.1016/j.neuron.2023.02.001 article EN cc-by-nc-nd Neuron 2023-02-23

Parkinson's disease is associated with intracellular α-synuclein accumulation and ventral midbrain dopaminergic neuronal death in the Substantia Nigra of brain patients. The Rho GTPase pathway, mainly linking surface receptors to organization actin microtubule cytoskeletons, has been suggested participate pathogenesis. Nevertheless, its exact contribution remains obscure. To unveil participation family molecular pathogenesis disease, we first used C elegans demonstrate role small RAC1...

10.1007/s12035-018-0881-7 article EN cc-by Molecular Neurobiology 2018-02-10

Obesity and its associated metabolic comorbidities are a rising global health social issue, with novel therapeutic approaches urgently needed. Adipose tissue plays key role in the regulation of energy balance adipose tissue-derived mesenchymal stem cells (AT-MSCs) have gained great interest cell therapy. Carnitine palmitoyltransferase 1A (CPT1A) is gatekeeper enzyme for mitochondrial fatty acid oxidation. Here, we aimed to generate adipocytes expressing constitutively active CPT1A form...

10.1016/j.ymben.2023.04.010 article EN cc-by-nc-nd Metabolic Engineering 2023-04-23

The classical diagnosis of Parkinsonism is based on motor symptoms that are the consequence nigrostriatal pathway dysfunction and reduced dopaminergic output. However, a decade prior to emergence issues, patients frequently experience non-motor symptoms, such as sense smell (hyposmia). cellular molecular bases for these early defects remain enigmatic. To explore this, we developed new collection five fruit fly models familial conducted single-cell RNA sequencing young brains models....

10.7554/elife.98348.2 preprint EN 2025-02-28

Abstract Synaptic neurotransmission is a critical hallmark of brain activity and one the first processes to be affected in neural diseases. Monitoring this process, particular synaptic vesicle recycling, living cells has been instrumental unraveling mechanisms responsible for neurotransmitter release. However, currently available reporters suffer from major limitations such large probe size or lack suitability human neurons, hampering understanding pathophysiology. Here we describe NbLumSyt1...

10.1101/2025.04.16.649111 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2025-04-20

The classical diagnosis of Parkinsonism is based on motor symptoms that are the consequence nigrostriatal pathway dysfunction and reduced dopaminergic output. However, a decade prior to emergence issues, patients frequently experience non-motor symptoms, such as sense smell (hyposmia). cellular molecular bases for these early defects remain enigmatic. To explore this, we developed new collection five fruit fly models familial conducted single-cell RNA sequencing young brains models....

10.7554/elife.98348.3 article EN cc-by eLife 2025-04-03

Abstract Patient-specific induced pluripotent stem cells (iPSCs) are a powerful tool to investigate the molecular mechanisms underlying Parkinson’s disease (PD), and might provide novel platforms for systematic drug screening. Several strategies have been developed generate iPSC-derived tyrosine hydroxylase (TH)-positive dopaminergic neurons (DAn), clinically relevant cell type in PD; however, they often result mixed neuronal cultures containing only small proportion of TH-positive DAn. To...

10.1038/s41598-019-43080-2 article EN cc-by Scientific Reports 2019-05-02

Abstract A deeper understanding of early disease mechanisms occurring in Parkinson’s (PD) is needed to reveal restorative targets. Here we report that human induced pluripotent stem cell (iPSC)-derived dopaminergic neurons (DAn) obtained from healthy individuals or patients harboring LRRK2 PD-causing mutation can create highly complex networks with evident signs functional maturation over time. Compared control neuronal networks, PD patients’ displayed an elevated bursting behavior, the...

10.1038/s41531-021-00198-3 article EN cc-by npj Parkinson s Disease 2021-07-02

Abstract Tyrosine hydroxylase deficiency (THD) is a rare genetic disorder leading to dopaminergic depletion and early‐onset Parkinsonism. Affected children present with either severe form that does not respond L‐Dopa treatment (THD‐B) or milder responsive (THD‐A). We generated induced pluripotent stem cells (iPSCs) from THD patients were differentiated into neurons (DAn) compared control‐DAn healthy individuals gene‐corrected isogenic controls. Consistent patients, iPSC‐DAn displayed lower...

10.15252/emmm.202215847 article EN cc-by EMBO Molecular Medicine 2023-02-06

Abstract Somatic cells can be reprogrammed to induced pluripotent stem (iPS) by ectopic expression of the four factors Oct4, Klf4, Sox2, and Myc. Here, we investigated role Gata4 in reprogramming process present evidence for a negative this family transcription induction pluripotency. Coexpression with Sox2 or without Myc mouse embryonic fibroblasts greatly impaired endogenous Nanog expression. The lack upregulation was associated blockade transition from initiation phase full state...

10.1002/stem.1272 article EN Stem Cells 2012-11-07

Abstract The classical diagnosis of Parkinsonism is based on motor symptoms that are the consequence nigrostriatal pathway dysfunction and reduced dopaminergic output. However, a decade prior to emergence issues, patients frequently experience non-motor symptoms, such as sense smell (hyposmia). cellular molecular bases for these early defects remain enigmatic. To explore this, we developed new collection five fruit fly models familial conducted single-cell RNA sequencing young brains models....

10.1101/2023.03.11.532176 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-03-11

Presynaptic terminals can be located far from the neuronal cell body and are thought to independently regulate protein organelle turnover. In this work, we report a soma-centered mechanism that regulates autophagy-driven turnover at distant presynaptic in Drosophila. We show system is regulated by Rab39, whose human homolog mutated Parkinson's disease. Although Rab39 localized soma, its loss of function causes increased autophagy terminals, resulting faster synaptic neurodegeneration. Using...

10.1101/2024.11.21.624639 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2024-11-21
Caroline B. Pantazis Andrian Yang Erika Lara Justin A. McDonough Cornelis Blauwendraat and 90 more Lirong Peng Hideyuki Oguro Jitendra Kumar Kanaujiya Jizhong Zou David P. Sebesta Gretchen Pratt Erin Cross Jeffrey Blockwick Philip Buxton Lauren Kinner-Bibeau Constance Medura Christopher Tompkins Stephen H. Hughes Marianita Santiana Faraz Faghri Mike A. Nalls Dan Vitale Shannon L. Ballard Yue Qi Daniel M. Ramos Kailyn Anderson Julia T. Stadler Priyanka Narayan Jason Papademetriou Luke Reilly Matthew P. Nelson Sanya Aggarwal Leah U. Rosen Peter Kirwan Venkat Pisupati Steven L. Coon Sonja W. Scholz Theresa Priebe Miriam Öttl Jian Dong Marieke Meijer Lara J.M. Janssen Vanessa S. Lourenco Rik van der Kant Dennis Crusius Dominik Paquet Ana‐Caroline Raulin Guojun Bu Aaron Held Brian J. Wainger Rebecca Gabriele Jackie M. Casey Selina Wray Dad Abu-Bonsrah Clare L. Parish Melinda S. Beccari Don W. Cleveland Emmy Li Indigo V.L. Rose Martin Kampmann Carles Calatayud Patrik Verstreken Laurin Heinrich Max Yang Chen Birgitt Schüle Dan Dou Erika L.F. Holzbaur Maria Clara Zanellati Richa Basundra Mohanish Deshmukh Sarah Cohen Richa Khanna Malavika Raman Zachary S. Nevin Madeline Matia Jonas Van Lent Vincent Timmerman Bruce R. Conklin Katherine Johnson Chase Ke Zhang Salome Funes Daryl A. Bosco Lena Erlebach Marc Welzer Deborah Kronenberg‐Versteeg Guochang Lyu Ernest Arenas Elena Coccia Lily Sarrafha Tim Ahfeldt John C. Marioni William C. Skarnes Mark Cookson Michael E. Ward Florian T. Merkle

Abstract Human induced pluripotent stem cell (iPSC) lines are a powerful tool for studying development and disease, but the considerable phenotypic variation between makes it challenging to replicate key findings integrate data across research groups. To address this issue, we sub-cloned candidate iPSC deeply characterised their genetic properties using whole genome sequencing, genomic stability upon CRISPR/Cas9-based gene editing, including differentiation commonly-used types. These studies...

10.1101/2021.12.15.472643 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2021-12-17

The classical diagnosis of Parkinsonism is based on motor symptoms that are the consequence nigrostriatal pathway dysfunction and reduced dopaminergic output. However, a decade prior to emergence issues, patients frequently experience non-motor symptoms, such as sense smell (hyposmia). cellular molecular bases for these early defects remain enigmatic. To explore this, we developed new collection five fruit fly models familial conducted single-cell RNA sequencing young brains models....

10.7554/elife.98348 article EN 2024-07-17

Abstract Neuronal activity and neurotransmitter release cause use-dependent decline in protein function. However, it is unclear how this coupled to local turnover quality control mechanisms. Here we show that the endocytic Endophilin-A (EndoA/ENDOA1) couples activity-induced calcium influx synaptic autophagy neuronal survival. We identify single mutations EndoA flexible region either increases diffusion promotes autophagosome formation absence of calcium, or immobilizes blocks autophagy,...

10.1101/2022.04.29.490010 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-04-30

Abstract Tyrosine hydroxylase deficiency (THD) is a rare genetic disorder leading to dopaminergic depletion and early-onset parkinsonism. Affected children present with either severe form that does not respond L-Dopa treatment (THD-B), or milder responsive (THD-A). We generated induced pluripotent stem cells (iPSCs) from THD patients were differentiated into neurons (DAn) compared control-DAn healthy individuals gene-corrected isogenic controls. Consistent patients, iPSC-DAn displayed lower...

10.1101/2022.02.24.481741 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-02-26
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