A5078792086- Banana Cultivation and Research
- Chromosomal and Genetic Variations
- Wheat and Barley Genetics and Pathology
- Genomics and Phylogenetic Studies
- Plant biochemistry and biosynthesis
- Plant Gene Expression Analysis
- Advanced Multi-Objective Optimization Algorithms
- Legume Nitrogen Fixing Symbiosis
- Photosynthetic Processes and Mechanisms
- Genetic and phenotypic traits in livestock
- Hemodynamic Monitoring and Therapy
- Plant Disease Resistance and Genetics
- Gaussian Processes and Bayesian Inference
- Genetic Mapping and Diversity in Plants and Animals
- Optimal Experimental Design Methods
- Cancer-related Molecular Pathways
- Metaheuristic Optimization Algorithms Research
- Sugarcane Cultivation and Processing
- Advanced Cellulose Research Studies
- Ubiquitin and proteasome pathways
- Genetics and Neurodevelopmental Disorders
- RNA and protein synthesis mechanisms
- Adsorption and biosorption for pollutant removal
- Plant-Microbe Interactions and Immunity
- Meteorological Phenomena and Simulations
University of Chinese Academy of Sciences
2021-2024
South China Botanical Garden
2021-2024
Beijing Botanical Garden
2021-2024
China National Botanical Garden
2024
State Forestry and Grassland Administration
2024
Chinese Academy of Sciences
2024
Fujian Agriculture and Forestry University
2019-2020
Fujian University of Technology
2020
Beijing University of Civil Engineering and Architecture
2018
Tianjin University of Science and Technology
2015
Abstract Background Ensete glaucum (2n = 2x 18) is a giant herbaceous monocotyledonous plant in the small Musaceae family along with banana (Musa). A high-quality reference genome sequence assembly of E. resource for functional and evolutionary studies Ensete, Musaceae, Zingiberales. Findings Using Oxford Nanopore Technologies, chromosome conformation capture (Hi-C), Illumina RNA survey sequence, supported by molecular cytogenetics, we report 481.5 Mb 9 pseudo-chromosomes 36,836 genes. total...
Avena longiglumis Durieu (2n = 2x 14) is a wild relative of cultivated oat (Avena sativa, 2n 6x 42) with good agronomic and nutritional traits. The plant mitochondrial genome has complex organization carries genetic traits value in exploiting resources, not least male sterility alleles used to generate F1 hybrid seeds. Therefore, we aim complement the chromosomal-level nuclear chloroplast assemblies A. complete assembly (mitogenome) based on Illumina ONT long reads, comparing its structure...
Abstract RNA silencing is a conserved mechanism in eukaryotic organisms to regulate gene expression. Argonaute (AGO), Dicer-like (DCL) and RNA-dependent polymerase (RDR) proteins are critical components of silencing, but how these families’ functions sugarcane were largely unknown. Most stress-resistance genes modern cultivars ( Saccharum spp.) originated from wild species , for example S. spontaneum . Here, we used genome-wide analysis phylogenetic approach identify four DCL 21 AGO 11 RDR...
C2H2 zinc finger protein (ZFP) genes have been extensively studied in many organisms and can function as transcription factors be involved biological processes including plant growth development stress responses. In the current study, a comprehensive genomics analysis of C2H2-ZFP B. rapa was performed. A total 301 putative (BrC2H2-ZFP) were identified from available Brassica genome databases, further characterized through conserved amino acid residues C2H2-ZF domains their organization,...
The HECT-domain protein family is one of the most important classes E3 ligases. While roles this in human diseases have been intensively studied, information for plant HECTs limited. In present study, we performed identification HECT genes Brassica rapa and oleracea, followed by analysis phylogeny, gene structure, additional domains, putative cis-regulatory elements, chromosomal location, synteny, expression. Ten 13 were respectively identified B. oleracea then resolved into seven groups...
Abstract Background Oat ( Avena sativa , 2 n =6 x =42) is an important crop, and with its wild relatives including A. longiglumis (ALO, =14), has advantageous agronomic nutritional traits. A de-novo chromosome-level ALO genome assembly was made to investigate diversity structural variation between species other Poaceae in evolutionary context, develop genomic resources identify the pangenome economic traits within Pooideae. Results The 3.85 gigabase (seven pseudo-chromosomes), contained...
Abstract Flavonoids in Musaceae are involved pigmentation and stress responses, including cold resistance, a component of the healthy human diet. Identification analysis sequence copy number flavonoid biosynthetic genes valuable for understanding nature diversity evolution species. In this study, we identified 71–80 chromosome-scale genome assemblies Musaceae, those Ensete glaucum, Musella lasiocarpa, Musa beccarii, M. acuminata, balbisiana schizocarpa, checking annotations with BLAST...
Lectin receptor-like kinases (LecRLKs) are membrane-bound receptor genes found in many plant species. They involved perceiving stresses and responding to the environment. Oat (
This paper investigates two model-free methods for numerical deconvolution of recirculating indicator concentration curves. The methods, damped least squares and discrete orthogonal polynomial deconvolution, are applied to simulated data verify the reliability algorithms. Both provide damping that results in estimated transport functions smooth reasonable estimates actual function. On convolution with input curve, good fits output curve. In addition, identifying an optimal solution...
Potato residue is vastly produced in the food industry but it landfilled. This article describes treatment of purified cellulose derived from potato residues by a high pressure homogenizer to produce nano-fibrillated (NFC), which was then oxidized sodium periodate prepare dialdehyde (DANFC). The NFC and DANFC were characterized scanning electron microscope (SEM) Fourier transform infrared spectroscopy (FTIR). orthogonal experiment induced obtain maximum degree oxidation (DO) on DANFC....
Abstract Flavonoids in Musaceae are involved pigmentation and stress responses, including pathogen defense UV protection, a component of the healthy human diet. Identification analysis sequence copy number flavonoid biosynthetic genes valuable for understanding nature diversity evolution species. In this study, we identified 71 to 80 chromosome-scale genome assemblies Musaceae, those Ensete glaucum , Musella lasiocarpa Musa beccarii M. acuminata balbisiana schizocarpa, checking annotations...
Abstract Background Ensete glaucum (2 n = 2 x 18) is a giant herbaceous monocotyledonous plant in the small Musaceae family along with banana ( Musa ). A high-quality reference genome sequence of E. offers vital genomic resource for functional and evolutionary studies , Musaceae, more widely Zingiberales. Findings Using combination Illumina Oxford Nanopore Technologies (ONT) sequencing, genome-wide chromosome conformation capture (Hi-C), RNA survey sequence, we report assembly 481.5Mb 9...
Recently it becomes a growing trend to study complex systems which contain multiple computer codes with different levels of accuracy, and number hierarchical Gaussian process models are proposed handle such multiple-fidelity codes. This paper derives the best linear unbiased prediction for three popular classes multiple-level models. The predictors all have explicit expressions at each untried point. Empirical also provided by plug-in methods generalized maximum likelihood estimators unknown...