Yoshifumi Nishimura

ORCID: 0000-0003-0918-972X
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Advanced Chemical Physics Studies
  • Spectroscopy and Quantum Chemical Studies
  • Carbon Nanotubes in Composites
  • Graphene research and applications
  • Machine Learning in Materials Science
  • Quantum, superfluid, helium dynamics
  • Advancements in Battery Materials
  • X-ray Diffraction in Crystallography
  • Spectroscopy and Laser Applications
  • Carbon Dioxide Capture Technologies
  • Advanced Battery Materials and Technologies
  • Nanopore and Nanochannel Transport Studies
  • Crystallization and Solubility Studies
  • Photosynthetic Processes and Mechanisms
  • Photoreceptor and optogenetics research
  • Molecular Junctions and Nanostructures
  • Phase Equilibria and Thermodynamics
  • Fullerene Chemistry and Applications
  • Photochemistry and Electron Transfer Studies
  • Mass Spectrometry Techniques and Applications
  • Analytical Chemistry and Sensors
  • Advanced battery technologies research
  • NMR spectroscopy and applications
  • Fuel Cells and Related Materials
  • Inorganic Chemistry and Materials

Waseda University
2015-2025

National Yang Ming Chiao Tung University
2014-2016

Institute for Molecular Science
2015-2016

Nagoya University
1982-2015

Yokohama City University
2012

Asahi Kasei (Japan)
2010

Emerson (United States)
2008

Emory University
2008

Temple University
2008

University of Pittsburgh
2008

Abstract Water confined within one-dimensional (1D) hydrophobic nanochannels has attracted significant interest due to its unusual structure and dynamic properties. As a representative system, water-filled carbon nanotubes (CNTs) are generally studied, but direct observation of the crystal proton transport is difficult for CNTs their poor crystallinity high electron conduction. Here, we report unique water-cluster conduction realized in metal-organic nanotube, [Pt(dach)(bpy)Br] 4 (SO ) ·32H...

10.1038/s41467-020-14627-z article EN cc-by Nature Communications 2020-02-18

Aqueous Na- or K-ion batteries could virtually eliminate the safety and cost concerns raised from Li-ion batteries, but their widespread applications have generally suffered narrow electrochemical potential window (ca. 1.23 V) of aqueous electrolytes that leads to low energy density. Herein, by exploring optimized eutectic systems Na K salts with asymmetric imide anions, we discovered, for first time, room-temperature hydrate melts systems, which are second third alkali metal reported since...

10.1002/anie.201908830 article EN Angewandte Chemie International Edition 2019-07-30

The linear-scaling divide-and-conquer (DC) quantum chemical methodology is applied to the density-functional tight-binding (DFTB) theory develop a massively parallel program that achieves on-the-fly molecular reaction dynamics simulations of huge systems from scratch. functions perform large scale geometry optimization and with DC-DFTB potential energy surface are implemented called DC-DFTB-K. A novel interpolation-based algorithm developed for parallelizing determination Fermi level in DC...

10.1002/jcc.24419 article EN Journal of Computational Chemistry 2016-06-18

Carbon nanotubes have long been described as rolled-up graphene sheets. It is only fairly recently observed that longitudinal cleavage of carbon nanotubes, using chemical, catalytical and electrical approaches, unzips them into thin strips various widths, the so-called nanoribbons. In contrast, rolling up these flimsy ribbons tubes in a real experiment has not possible. Theoretical studies conducted by Kit et al. demonstrated tube formation through twisting nanoribbon, an idea very different...

10.1038/ncomms3548 article EN cc-by-nc-sa Nature Communications 2013-10-04

We have investigated the growth mechanism of coronene-derived graphene nanoribbons (GNRs) using two different precursors: coronene and a dimer form coronene, so-called dicoronylene (C48H20). For both precursors, formation nanoribbon-like materials inside carbon nanotubes (CNTs) was confirmed by transmission electron microscope observations. Experimental theoretical Raman analysis reveals that samples also encapsulated linearly condensed other oligomers, which can be regarded as analogues to...

10.1021/jp3037268 article EN The Journal of Physical Chemistry C 2012-06-19

Abstract The Criegee intermediates are carbonyl oxides that play critical roles in ozonolysis of alkenes the atmosphere. So far, mid-infrared spectrum only simplest intermediate CH 2 OO has been reported. Methyl substitution produces two conformers 3 CHOO and consequently complicates infrared spectrum. Here we report transient syn - anti -CH CHOO, produced from CHI + O a flow reactor, using step-scan Fourier-transform spectrometer. Guided supported by high-level full-dimensional quantum...

10.1038/ncomms8012 article EN cc-by Nature Communications 2015-05-11

D cdftbmd is a Fortran 90/95 program that enables efficient quantum mechanical molecular dynamics (MD) simulations using divide‐and‐conquer density functional tight‐binding (DC‐DFTB) method. Based on the remarkable performance of previous massively parallel DC‐DFTB energy and gradient calculations for huge systems, code has been specialized to MD simulations. Recent implementations modifications including DFTB extensions, improved computational speed in steps, algorithms initial guess charge...

10.1002/jcc.25804 article EN Journal of Computational Chemistry 2019-03-03

We present a novel density-functional tight-binding (DFTB) parametrization toolkit developed to optimize the parameters of various DFTB models in fully automatized fashion. The main features algorithm, based on particle swarm optimization technique, are discussed, and number initial pilot applications methodology molecular solid systems presented.

10.1021/acs.jctc.5b00673 article EN Journal of Chemical Theory and Computation 2015-11-19

The process of proton diffusion in liquid water was investigated using molecular dynamics (MD) simulations, and the total energy atomic forces were evaluated by divide-and-conquer-type density-functional tight-binding (DC-DFTB) method. effectiveness this approach confirmed comparing computational time clusters with conventional treatments. unit cell employed herein, which contained 523 molecules 1 excess proton, moderately large comparison those used previous studies. reasonable accuracy...

10.1021/acs.jpcb.5b12439 article EN The Journal of Physical Chemistry B 2015-12-23

The diffusion of the hydroxide ion in bulk water was examined by linear-scaling divide-and-conquer density-functional tight-binding molecular dynamics (DC-DFTB-MD) simulations using three different-sized unit cells that contained 522, 1050, and 4999 molecules as well one ion. repulsive potential for oxygen-oxygen pair improved iterative Boltzmann inversion, which adjusted radial distribution function DFTB-MD to reference density functional theory-MD one. calculated coefficients Arrhenius...

10.1021/acs.jpcb.6b10659 article EN The Journal of Physical Chemistry B 2017-01-23

Predicting pKa values for different types of amine species with high accuracy and efficiency is critical importance the design performance economical solvents in carbon capture storage aqueous solutions. In this study, we demonstrate that density-functional tight-binding-based metadynamics simulations are a promising approach to calculate free energy difference between protonated neutral states amines solution inexpensive computational cost. The calculated were satisfactory agreement...

10.1021/acs.jctc.7b00855 article EN Journal of Chemical Theory and Computation 2017-12-05

Abstract Divide-and-conquer-type density-functional tight-binding molecular dynamics simulations of the CO2 absorption process in monoethanolamine (MEA) solution have been performed for systems containing thousands atoms. The formation carbamate anions has widely investigated neutral via ab initio simulations, yet present study is aimed at identifying role hydroxide ions acid-base equilibrium. structural and electronic analyses reveal that ion approaches, Grotthuss-type shuttling,...

10.1246/bcsj.20170142 article EN Bulletin of the Chemical Society of Japan 2017-08-09

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTViscoelastic properties of semidilute polystyrene solutionsKunihiro Osaki, Yoshifumi Nishimura, and Michio KurataCite this: Macromolecules 1985, 18, 6, 1153–1157Publication Date (Print):June 1, 1985Publication History Published online1 May 2002Published inissue 1 June 1985https://pubs.acs.org/doi/10.1021/ma00148a019https://doi.org/10.1021/ma00148a019research-articleACS PublicationsRequest reuse permissionsArticle Views238Altmetric-Citations43LEARN...

10.1021/ma00148a019 article EN Macromolecules 1985-06-01

Combined temperature-programmed desorption and IR studies suggest that absorption cross sections of IR-active vibrations molecules "strongly" bound to single-wall carbon nanotubes (SWCNTs) are reduced at least by a factor 10. Quantum chemical simulations show intensities endohedrally encapsulated dramatically reduced, identify dielectric screening highly polarizable SWCNT sidewalls as the origin such "screening". The observed intensity reduction originates from sizable cancellation adsorbate...

10.1021/ja108903u article EN Journal of the American Chemical Society 2011-05-11

A low-computational-cost algorithm and its parallel implementation for periodic divide-and-conquer density-functional tight-binding (DC-DFTB) calculations are presented. The developed enables rapid computation of the interaction between atomic partial charges, which is bottleneck applications to large systems, by means multipole- interpolation-based approaches long- short-range contributions. numerical errors energy forces with respect conventional Ewald-based technique can be under control...

10.1002/jcc.25086 article EN Journal of Computational Chemistry 2017-10-18

The present study implemented the divide‐and‐conquer time‐dependent density‐functional tight‐binding (DC‐TDDFTB) code on a graphical processing unit (GPU). DC method, which is linear‐scaling scheme, divides total system into several fragments. By separately solving local equations in individual fragments, method could reduce slow central (CPU)‐GPU memory access, as well computational cost, and avoid shortfalls of GPU memory. Numerical applications confirmed that significantly accelerated...

10.1002/jcc.26053 article EN Journal of Computational Chemistry 2019-08-22

In this study, divide-and-conquer (DC) based density-functional tight-binding (DFTB) and time-dependent (TD-DFTB) methods were developed using long-range correction (LC), which resolved the underestimation of energy gaps between highest occupied molecular orbital lowest unoccupied orbital. We implemented LC term by entrywise product for effective utilization math kernel library. Test calculations formaldehyde in explicit water molecules demonstrate efficiency method. Furthermore,...

10.1021/acs.jctc.9b01268 article EN Journal of Chemical Theory and Computation 2020-02-19

The interaction of acetone with single wall carbon nanotubes (SWCNTs) at low temperatures was studied by a combination temperature programmed desorption (TPD) and dispersion-augmented density-functional-based tight binding (DFTB-D) theoretical simulations. On the basis results TPD study simulations, peaks can be assigned to following adsorption sites: (i) sites energy ∼75 kJ mol−1 (Tdes ∼300 K)—endohedral small diameter (∼7.7 Å); (ii) 40–68 ∼240 K)—acetone on accessible interstitial, groove...

10.1021/la800030y article EN Langmuir 2008-07-10

In this study, the divide-and-conquer (DC) method was extended to time-dependent density functional tight-binding (TDDFTB) theory enable excited-state calculations of large systems and is denoted by DC-TDDFTB. The efficient diagonalization algorithms TDDFTB DC-TDDFTB methods were implemented into our in-house program. Test polyethylene aldehyde p-coumaric acid, a pigment in photoactive yellow protein, water demonstrate high accuracy efficiency developed method. Furthermore, (TD)DFTB...

10.1021/acs.jctc.8b01214 article EN Journal of Chemical Theory and Computation 2019-01-23

Abstract Aqueous Na‐ or K‐ion batteries could virtually eliminate the safety and cost concerns raised from Li‐ion batteries, but their widespread applications have generally suffered narrow electrochemical potential window (ca. 1.23 V) of aqueous electrolytes that leads to low energy density. Herein, by exploring optimized eutectic systems Na K salts with asymmetric imide anions, we discovered, for first time, room‐temperature hydrate melts systems, which are second third alkali metal...

10.1002/ange.201908830 article EN Angewandte Chemie 2019-07-30
Coming Soon ...