Clémentine Lepinay

ORCID: 0000-0003-1330-1550
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About
Contact & Profiles
Research Areas
  • Mycorrhizal Fungi and Plant Interactions
  • Forest Ecology and Biodiversity Studies
  • Plant Pathogens and Fungal Diseases
  • Lichen and fungal ecology
  • Ecology and Vegetation Dynamics Studies
  • Soil Carbon and Nitrogen Dynamics
  • Legume Nitrogen Fixing Symbiosis
  • Plant Parasitism and Resistance
  • Biocrusts and Microbial Ecology
  • Microbial Community Ecology and Physiology
  • Building materials and conservation
  • Aeolian processes and effects
  • Plant-Microbe Interactions and Immunity
  • Plant and Fungal Interactions Research
  • Nematode management and characterization studies
  • Agriculture, Plant Science, Crop Management
  • Botany and Plant Ecology Studies
  • Environmental DNA in Biodiversity Studies
  • Natural Language Processing Techniques
  • Machine Learning in Bioinformatics
  • African Botany and Ecology Studies
  • Genomics and Phylogenetic Studies
  • Conservation Techniques and Studies
  • Plant and animal studies
  • Library Science and Information Systems

Czech Academy of Sciences, Institute of Microbiology
2019-2025

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement
2025

Czech Academy of Sciences
2017-2024

Laboratoire Physiologie Cellulaire & Végétale
2022-2023

CY Cergy Paris Université
2019

Czech Academy of Sciences, Institute of Botany
2017-2019

Agroécologie
2013

Institut Agro Dijon
2013

Université de Bourgogne
2013

Institut National de la Recherche Agronomique
2012

Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultivated and wild plants pathogenicity. The high importance of fungi processes contrasts the incompleteness our understanding patterns fungal biogeography environmental factors that drive those patterns. To reduce this gap knowledge, we collected validated data published on composition soil communities terrestrial environments including plant-associated habitats made them...

10.1038/s41597-020-0567-7 article EN cc-by Scientific Data 2020-07-13

Arbuscular mycorrhizal (AM) fungi are crucial mutualistic symbionts of the majority plant species, with essential roles in nutrient uptake and stress mitigation. The importance AM ecosystems contrasts our limited understanding patterns fungal biogeography environmental factors that drive those patterns. This article presents a release newly developed global dataset (GlobalAMFungi database, https://globalamfungi.com) aims to reduce this knowledge gap. It contains almost 50 million...

10.1111/nph.19283 article EN cc-by-nc New Phytologist 2023-10-02

Summary Gradients in species diversity across elevations and latitudes have fascinated biologists for decades. While these gradients been well documented macroorganisms, there is limited consensus about their universality, shape drivers microorganisms, such as fungi, despite the importance of fungal ecosystem functions services. We conducted a comprehensive survey richness forests 17 elevational transects along latitudinal gradient covering continental scale Europe. Diversity patterns...

10.1111/nph.70012 article EN cc-by New Phytologist 2025-02-25

Fine woody debris (FWD) represents the majority of deadwood stock in managed forests and serves as an important biodiversity hotspot refuge for many organisms, including fungi. Wood decomposition forests, representing input nutrients into forest soils, is mainly driven by fungal communities that undergo continuous changes during decomposition. However, while assembly processes long-lasting coarse have been repeatedly explored, similar information more ephemeral habitat fine missing. Here, we...

10.3389/fmicb.2022.835274 article EN cc-by Frontiers in Microbiology 2022-04-13

After wildfires in Mediterranean ecosystems, ruderal mosses are pioneer species, stabilizing the soil surface previous to establishment of vascular vegetation. However, little is known about implication moss biocrusts for recovery and resilience soils early post-fire stages semi-arid areas. Therefore, we studied effects burgeoning biocrust on physicochemical biochemical properties diversity composition microbial communities after a moderate-to-high wildfire severity. Seven months wildfire,...

10.1016/j.scitotenv.2022.157467 article EN cc-by The Science of The Total Environment 2022-07-19

This review by a multidisciplinary team maps out key components and emerging connections within microbial ecology, ecophysiology, plant genetics. approach aims to develop better understanding of plant–microbe interactions in the rhizosphere. It is placed intellectual landscape agroecology. For this purpose, ecology concepts are blended with ecophysiology understand basis interactions. Moreover, genetic mapping factors or "loci" controlling these introduced linkage analysis genome-wide...

10.1002/9781118297674.ch7 preprint EN 2013-03-18

Deadwood represents an important carbon stock and contributes to climate change mitigation. Wood decomposition is mainly driven by fungal communities. Their composition known during decomposition, but it unclear how environmental factors such as wood chemistry affect these successional patterns through their effects on dominant taxa. We analysed the deadwood of Fagus sylvatica Abies alba across a succession series >40 years in natural fir-beech forest Czech Republic describe changes...

10.3390/jof7060412 article EN cc-by Journal of Fungi 2021-05-25

Abstract Background Grasslands provide fundamental ecosystem services that are supported by their plant diversity. However, the importance of taxonomic diversity for other taxa in grasslands remains poorly understood. Here, we studied associations between communities, soil chemistry and microbiome a wooded meadow Čertoryje (White Carpathians, Czech Republic), European hotspot species Results High was associated with treeless grassland areas high primary productivity contents nitrogen organic...

10.1186/s40793-024-00583-4 article EN cc-by Environmental Microbiome 2024-06-20

Mulches are highly effective in mitigating the risk of erosion generated after wildfires fire-prone ecosystems. Despite being a technique commonly used, it remains completely unexplored how mulches interact with positive effects emergent moss biocrust on recovery and resilience soils their microbial communities. For this purpose, wood-based mulch were assayed soil stability moisture improvement, nutrient inputs, response biomass, activity, composition, diversity. Soils studied one year wood...

10.1016/j.apsoil.2023.105026 article EN cc-by Applied Soil Ecology 2023-07-11

Soil microorganisms play a key role in both plants nutrition and health. Their relation with plant varies from mutualism to parasitism, according the balance of costs benefits for two partners interaction. These interactions involved liberation organic compounds via rhizodeposition. Modification atmospheric CO2 concentration may affect rhizodeposition as consequence trophic that bind microorganisms. Positive effect elevated on are rather well known but consequences micoorganisms their still...

10.1371/journal.pone.0045740 article EN cc-by PLoS ONE 2012-09-21

Abstract Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultural and wild plants pathogenicity. The high importance of fungi the processes contrasts incompleteness understanding patterns fungal biogeography environmental factors that drive it. To close this gap knowledge, we have here collected validated data published on composition soil communities terrestrial environments including plant-associated habitats made them...

10.1101/2020.04.24.060384 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-04-25

<title>Abstract</title> <bold>Background</bold>Grasslands provide fundamental ecosystem services that are supported by their plant diversity. However, the importance of taxonomic diversity for other taxa in grasslands remains an open question. Here, we studied associations between communities, soil chemistry and microbiome wooded meadow Čertoryje (White Carpathians, Czech Republic), a European hotspot species diversity.<bold>Results</bold>High was associated with treeless grassland patches...

10.21203/rs.3.rs-3495767/v1 preprint EN cc-by Research Square (Research Square) 2023-10-31
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