- Biomedical Text Mining and Ontologies
- Clostridium difficile and Clostridium perfringens research
- Oral microbiology and periodontitis research
- Bacterial biofilms and quorum sensing
- Bacteriophages and microbial interactions
- Bacterial Genetics and Biotechnology
- Gut microbiota and health
Cystic Fibrosis Foundation
2022-2023
Georgia Institute of Technology
2022
Eastern Connecticut State University
2019
Abstract The ability to switch between different lifestyles allows bacterial pathogens thrive in diverse ecological niches 1,2 . However, a molecular understanding of their lifestyle changes within the human host is lacking. Here, by directly examining gene expression human-derived samples, we discover that orchestrates transition chronic and acute infection opportunistic pathogen Pseudomonas aeruginosa level this gene, here named sicX , highest P. genes expressed wound cystic fibrosis...
Many pathogenic microbial ecosystems are polymicrobial, and community function can be shaped by interbacterial interactions. Little is known, however, regarding the genetic determinants required for fitness in heterotypic environments.
Abstract PubMed catalogs over 33,000 articles published with the keywords “cancer” and “gene” in past year alone. The large volume of cancer genomic publications necessitates development text-mining tools to help researchers navigate summarize efficiently. Here we present a Cancer Publication Portal (CPP) that allows researcher search literature based on gene interest. CPP integrates data from several sources, including PubTator, which uses robust identify associations between biological...
PubMed catalogs over 33,000 articles published with the keywords "cancer" and "gene" in past year alone. The large volume of cancer genomic publications necessitates development text-mining tools to help researchers navigate summarize efficiently. Here we present a Cancer Publication Portal (CPP) that allows researcher search literature based on gene interest. CPP integrates data from several sources, including PubTator, which uses robust identify associations between biological concepts;...