A5074042880- Scientific Computing and Data Management
- Cloud Computing and Resource Management
- Distributed and Parallel Computing Systems
- Genetics, Bioinformatics, and Biomedical Research
- Research Data Management Practices
- Protein Structure and Dynamics
- Advanced Proteomics Techniques and Applications
- Mass Spectrometry Techniques and Applications
- Microbial Metabolic Engineering and Bioproduction
- Bioinformatics and Genomic Networks
University of Arizona
2016-2024
CyVerse, the largest publicly-funded open-source research cyberinfrastructure for life sciences, has played a crucial role in advancing data-driven since 2010s. As technology landscape evolved with emergence of cloud computing platforms, machine learning and artificial intelligence (AI) applications, CyVerse enabled access by providing interfaces, Software as Service (SaaS), cloud-native Infrastructure Code (IaC) to leverage new technologies. services enable researchers integrate...
<ns4:p>Docker has become a very popular container-based virtualization platform for software distribution that revolutionized the way in which scientific and dependencies (software stacks) can be packaged, distributed, deployed. Docker makes complex time-consuming installation procedures needed one-time process. Because it enables platform-independent installation, versioning of environments, easy redeployment reproducibility, is an ideal candidate deployment identical stacks on different...
Background Molecular Dynamics (MD) simulation of biomolecules provides important insights into conformational changes and dynamic behavior, revealing critical information about folding interactions with other molecules. This enables advances in drug discovery the design therapeutic interventions. The collection simulations stored computers across world holds immense potential to serve as training data for future Machine Learning models that will transform prediction structure, dynamics,...
Abstract CyVerse, the largest publicly-funded open-source research cyberinfrastructure for life sciences, has played a crucial role in advancing data-driven since 2010s. As technology landscape evolved with emergence of cloud computing platforms, machine learning and artificial intelligence (AI) applications, CyVerse enabled access by providing interfaces, Software as Service (SaaS), cloud-native Infrastructure Code (IaC) to leverage new technologies. services enable researchers integrate...
<ns4:p>Docker has become a very popular container-based virtualization platform for software distribution that revolutionized the way in which scientific and dependencies (software stacks) can be packaged, distributed, deployed. Docker makes complex time-consuming installation procedures needed one-time process. Because it enables platform-independent installation, versioning of environments, easy redeployment reproducibility, is an ideal candidate deployment identical stacks on different...
Molecular Dynamics (MD) simulation of biomolecules provides important insights into conformational changes and dynamic behavior, revealing critical information about folding interactions with other molecules. The collection simulations stored in computers across the world holds immense potential to serve as training data for future Machine Learning models that will transform prediction structure, dynamics, drug interactions, more. Ideally, there should exist an open access repository enables...
<ns4:p>Docker has become a very popular container-based virtualization platform for software distribution that revolutionized the way in which scientific and dependencies (software stacks) can be packaged, distributed, deployed. Docker makes complex time-consuming installation procedures needed one-time process. Because it enables platform-independent installation, versioning of environments, easy redeployment reproducibility, is an ideal candidate deployment identical stacks on different...