Tobias Gradinger

ORCID: 0000-0002-8049-2900
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About
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Research Areas
  • Long-Term Effects of COVID-19
  • Machine Learning in Healthcare
  • Chronic Obstructive Pulmonary Disease (COPD) Research
  • COVID-19 diagnosis using AI
  • COVID-19 Clinical Research Studies
  • Chronic Disease Management Strategies
  • Biomedical Text Mining and Ontologies
  • Pain Mechanisms and Treatments
  • Thermal Regulation in Medicine
  • Asthma and respiratory diseases
  • Cardiac Imaging and Diagnostics
  • Respiratory and Cough-Related Research
  • Pain Management and Treatment
  • Traumatic Brain Injury and Neurovascular Disturbances
  • Respiratory Support and Mechanisms
  • Intensive Care Unit Cognitive Disorders
  • Artificial Intelligence in Healthcare
  • Sepsis Diagnosis and Treatment
  • COVID-19 and healthcare impacts
  • Data-Driven Disease Surveillance
  • Personality Disorders and Psychopathology
  • Mobile Health and mHealth Applications
  • Genomics and Rare Diseases
  • COVID-19 and Mental Health
  • Clinical Reasoning and Diagnostic Skills

Heidelberg University
2019-2023

University Hospital Heidelberg
2019-2023

Central Institute of Mental Health
2019-2021

Heidelberg University
2020

University Medical Centre Mannheim
2019-2020

University of Mannheim
2019

We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) 96 hospitals across five countries (www.covidclinical.net). Contributors utilized Informatics for Integrating Biology Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms map a common model. The group focused on temporal changes in key...

10.1038/s41746-020-00308-0 article EN cc-by npj Digital Medicine 2020-08-19
Hossein Estiri Zachary H. Strasser Gabriel A. Brat Yevgeniy R. Semenov James R. Aaron and 95 more Giuseppe Agapito Adem Albayrak M Alessiani Danilo F. Amendola Li L. L. J. Anthony Bruce J. Aronow Fatima Ashraf Andrew M. Atz Paul Avillach James Balshi Brett K. Beaulieu-Jones Douglas S. Bell Antonio Bellasi Riccardo Bellazzi Vincent Benoît Michele Beraghi José Luis Bernal Sobrino Mélodie Bernaux Romain Bey Alvar Blanco Martínez Pramod Bhatotia Clara-Lea Bonzel John A. Booth Silvano Bòsari Florence T. Bourgeois Robert L. Bradford Gabriel A. Brat Stéphane Breant Nicholas W. Brown William Bryant Mauro Bucalo Anita Burgun Tianxi Cai Mario Cannataro Aldo Carmona Charlotte Caucheteux Julien Champ Jin Chen Krista Chen Luca Chiovato Lorenzo Chiudinelli Kelly Cho James J. Cimino Tiago K. Colicchio Sylvie Cormont Sébastien Cossin Jean B. Craig Juan Luis Cruz-Bermúdez Jaime Cruz‐Rojo Arianna Dagliati Mohamad Daniar Christel Daniel Anahita Davoudi Batsal Devkota Julien Dubiel Loïc Estève Hossein Estiri Shirley Fan Robert W Follett Paula S. Azevedo Thomas Ganslandt Noelia García Barrio Lana X. Garmire Nils Gehlenborg Alon Geva Tobias Gradinger Alexandre Gramfort Romain Griffier Nicolas Griffon Olivier Grisel Alba Gutiérrez‐Sacristán David A. Hanauer Christian Haverkamp Bing He Darren W. Henderson Martin Hilka John H. Holmes Chuan Hong Petar Horki Kenneth M. Huling Meghan R. Hutch Richard Issitt Anne‐Sophie Jannot Vianney Jouhet Mark S. Keller Katie Kirchoff Jeffrey G. Klann Isaac S. Kohane Ian D. Krantz Detlef Kraska Ashok Krishnamurthy Sehi L’Yi Trang T. Le Judith Leblanc Andressa R. R. Leite

For some SARS-CoV-2 survivors, recovery from the acute phase of infection has been grueling with lingering effects. Many symptoms characterized as post-acute sequelae COVID-19 (PASC) could have multiple causes or are similarly seen in non-COVID patients. Accurate identification PASC phenotypes will be important to guide future research and help healthcare system focus its efforts resources on adequately controlled age- gender-specific a infection.In this retrospective electronic health...

10.1186/s12916-021-02115-0 article EN cc-by BMC Medicine 2021-09-26
Florence T. Bourgeois Alba Gutiérrez‐Sacristán Mark S. Keller Molei Liu Chuan Hong and 95 more Clara-Lea Bonzel Amelia L.M. Tan Bruce J. Aronow Martin Boeker John Booth Jaime Cruz‐Rojo Batsal Devkota Noelia García Barrio Nils Gehlenborg Alon Geva David A. Hanauer Meghan R. Hutch Richard Issitt Jeffrey G. Klann Yuan Luo Kenneth D. Mandl Chengsheng Mao Bertrand Moal Karyn Moshal Shawn N. Murphy Antoine Neuraz Kee Yuan Ngiam Gilbert S Omenn Lav P. Patel Miguel Pedrera‐Jiménez Neil J. Sebire Pablo Serrano Balazote Arnaud Serret-Larmande Andrew M. South Anastassia Spiridou Deanne Taylor Patric Tippmann Shyam Visweswaran Griffin M. Weber Isaac S. Kohane Tianxi Cai Paul Avillach James R. Aaron Giuseppe Agapito Adem Albayrak M Alessiani Danilo F Amendola François Angoulvant Li L.L.J. Anthony Andrew Atz James Balshi Brett K. Beaulieu‐Jones Douglas S. Bell Antonio Bellasi Riccardo Bellazzi Vincent Benoît Michele Beraghi José Luis Bernal Sobrino Mélodie Bernaux Romain Bey Alvar Blanco Martínez Silvano Bòsari Robert L. Bradford Gabriel A. Brat Stéphane Bréant Nicholas W. Brown William Bryant Mauro Bucalo Anita Burgun Mario Cannataro Aldo Carmona Charlotte Caucheteux Julien Champ Krista Chen Jin Chen Luca Chiovato Lorenzo Chiudinelli James J. Cimino Tiago K. Colicchio Sylvie Cormont Sébastien Cossin Jean B. Craig Juan Luis Cruz Bermúdez Arianna Dagliati Mohamad Daniar Christel Daniel Anahita Davoudi Julien Dubiel Scott L. DuVall Loïc Estève Shirley Fan Robert W Follett Paula SA Gaiolla Thomas Ganslandt Lana X. Garmire Tobias Gradinger Alexandre Gramfort Romain Griffier Nicolas Griffon Olivier Grisel

<h3>Importance</h3> Additional sources of pediatric epidemiological and clinical data are needed to efficiently study COVID-19 in children youth inform infection prevention treatment patients. <h3>Objective</h3> To describe international hospitalization trends key features with COVID-19. <h3>Design, Setting, Participants</h3> This retrospective cohort included patients hospitalized between February 2 October 10, 2020. Patient-level electronic health record (EHR) were collected across 27...

10.1001/jamanetworkopen.2021.12596 article EN cc-by-nc-nd JAMA Network Open 2021-06-11
Alba Gutiérrez‐Sacristán Arnaud Serret-Larmande Meghan R. Hutch Carlos Sáez Bruce J. Aronow and 95 more Surbhi Bhatnagar Clara-Lea Bonzel Tianxi Cai Batsal Devkota David A. Hanauer Ne Hooi Will Loh Yuan Luo Bertrand Moal Taha Mohseni Ahooyi Wanjikũ Njoroge Gilbert S. Omenn L. Nelson Sanchez‐Pinto Andrew M. South Francesca Sperotto Amelia L.M. Tan Deanne M. Taylor Guillaume Verdy Shyam Visweswaran Zongqi Xia Janet Zahner Paul Avillach Florence T. Bourgeois James R. Aaron Giuseppe Agapito Adem Albayrak Giuseppe Albi M Alessiani Anna Alloni Danilo F. Amendola François Angoulvant Li L.L.J. Anthony Fatima Ashraf Andrew M. Atz Paula S Azevedo James Balshi Brett K. Beaulieu‐Jones Douglas S. Bell Antonio Bellasi Riccardo Bellazzi Vincent Benoît Michele Beraghi José Luis Bernal-Sobrino Mélodie Bernaux Romain Bey Alvar Blanco-Martínez Martin Boeker John Booth Silvano Bosari Robert L. Bradford Gabriel A. Brat Stéphane Breant Nicholas W. Brown Raffaele Bruno William Bryant Mauro Bucalo Emily Bucholz Anita Burgun Mario Cannataro Aldo Carmona Charlotte Caucheteux Julien Champ Jin Chen Krista Y. Chen Luca Chiovato Lorenzo Chiudinelli Kelly Cho James J. Cimino Tiago K. Colicchio Sylvie Cormont Sébastien Cossin Jean B. Craig Juan Luis Cruz-Bermúdez Jaime Cruz‐Rojo Arianna Dagliati Mohamad Daniar Christel Daniel Priyam Das Audrey Dionne Rui Duan Julien Dubiel Scott L. DuVall Loïc Estève Hossein Estiri Shirley Fan Robert W Follett Thomas Ganslandt Noelia García Barrio Lana X. Garmire Nils Gehlenborg Emily Getzen Alon Geva Tomás González González Tobias Gradinger Alexandre Gramfort Romain Griffier

Importance The COVID-19 pandemic has been associated with an increase in mental health diagnoses among adolescents, though the extent of increase, particularly for severe cases requiring hospitalization, not well characterized. Large-scale federated informatics approaches provide ability to efficiently and securely query care data sets assess monitor hospitalization patterns conditions adolescents. Objective To estimate changes proportion hospitalizations adolescents following onset...

10.1001/jamanetworkopen.2022.46548 article EN cc-by-nc-nd JAMA Network Open 2022-12-13

Introduction: Data quality (DQ) is an important prerequisite for secondary use of electronic health record (EHR) data in clinical research, particularly with regards to progressing towards a learning system, one the MIRACUM consortium's goals. Following successful integration i2b2 research repository MIRACUM, we present standardized and generic DQ framework.

10.3233/shti190834 article EN Studies in health technology and informatics 2019-01-01
Arianna Dagliati Zachary H. Strasser Zahra Shakeri Hossein Abad Jeffrey G. Klann Kavishwar B. Wagholikar and 95 more Rebecca Mesa Shyam Visweswaran Michele Morris Yuan Luo Darren W. Henderson Malarkodi Jebathilagam Samayamuthu Bryce W. Q. Tan Guillame Verdy Gilbert S. Omenn Zongqi Xia Riccardo Bellazzi James R. Aaron Giuseppe Agapito Adem Albayrak Giuseppe Albi M Alessiani Anna Alloni Danilo F. Amendola François Angoulvant Li L.L.J. Anthony Bruce J. Aronow Fatima Ashraf Andrew M. Atz Paul Avillach Paula S. Azevedo James Balshi Brett K. Beaulieu‐Jones Douglas S. Bell Antonio Bellasi Riccardo Bellazzi Vincent Benoît Michele Beraghi José Luis Bernal-Sobrino Mélodie Bernaux Romain Bey Surbhi Bhatnagar Alvar Blanco-Martínez Clara-Lea Bonzel John Booth Silvano Bosari Florence T. Bourgeois Robert L. Bradford Gabriel A. Brat Stéphane Breant Nicholas W. Brown Raffaele Bruno William Bryant Mauro Bucalo Emily Bucholz Anita Burgun Tianxi Cai Mario Cannataro Aldo Carmona Charlotte Caucheteux Julien Champ Jin Chen Krista Y. Chen Luca Chiovato Lorenzo Chiudinelli Kelly Cho James J. Cimino Tiago K. Colicchio Sylvie Cormont Sébastien Cossin Jean B. Craig Juan Luis Cruz-Bermúdez Jaime Cruz‐Rojo Arianna Dagliati Mohamad Daniar Christel Daniel Priyam Das Batsal Devkota Audrey Dionne Rui Duan Julien Dubiel Scott L. DuVall Loïc Estève Hossein Estiri Shirley Fan Robert W. Follett Thomas Ganslandt Noelia García Barrio Lana X. Garmire Nils Gehlenborg Emily Getzen Alon Geva Tobias Gradinger Alexandre Gramfort Romain Griffier Nicolas Griffon Olivier Grisel Alba Gutiérrez‐Sacristán Larry Han David A. Hanauer Christian Haverkamp

Characterizing Post-Acute Sequelae of COVID (SARS-CoV-2 Infection), or

10.1016/j.eclinm.2023.102210 article EN cc-by EClinicalMedicine 2023-09-15

ABSTRACT We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) 96 hospitals across 5 countries ( www.covidclinical.net ). Contributors utilized Informatics for Integrating Biology Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms map a common model. The group focused on comorbidities...

10.1101/2020.04.13.20059691 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2020-04-18

Abstract Understanding the genetic architecture of schizophrenia (SCZ) is invaluable for development personalized treatment. In three independent cohorts, using an automated pipeline, we calculated 413 psychiatry-relevant polygenic scores. Using these scores, machine learning was applied to stratify SCZ patients into two biotypes in FinnGen (n =7486), and validate results PsyCourse Study =421) Bari =531). While showed comparable risk, they were primarily distinguished by a greater...

10.1101/2025.04.29.25326656 preprint EN cc-by-nc-nd medRxiv (Cold Spring Harbor Laboratory) 2025-04-30
Trang T. Le Alba Gutiérrez‐Sacristán Jiyeon Son Chuan Hong Andrew M. South and 95 more Brett K. Beaulieu-Jones Ne Hooi Will Loh Yuan Luo Michele Morris Kee Yuan Ngiam Lav P. Patel Malarkodi Jebathilagam Samayamuthu Emily Schriver Amelia L.M. Tan Jason H. Moore Tianxi Cai Gilbert S. Omenn Paul Avillach Isaac S. Kohane James R. Aaron Giuseppe Agapito Adem Albayrak M Alessiani Danilo F. Amendola François Angoulvant Li L. L. J. Anthony Bruce J. Aronow Andrew M. Atz James Balshi Douglas S. Bell Antonio Bellasi Riccardo Bellazzi Vincent Benoît Michele Beraghi José Luis Bernal Sobrino Mélodie Bernaux Romain Bey Alvar Blanco Martínez Pramod Bhatotia Clara-Lea Bonzel John Booth Silvano Bosari Florence T. Bourgeois Robert L. Bradford Gabriel A. Brat Stéphane Bréant Nicholas W. Brown William Bryant Mauro Bucalo Anita Burgun Mario Cannataro Aldo Carmona Charlotte Caucheteux Julien Champ Krista Chen Jin Chen Luca Chiovato Lorenzo Chiudinelli James J. Cimino Tiago K. Colicchio Sylvie Cormont Sébastien Cossin Jean B. Craig Juan Luis Cruz-Bermúdez Jaime Cruz‐Rojo Arianna Dagliati Mohamad Daniar Christel Daniel Anahita Davoudi Batsal Devkota Julien Dubiel Loïc Estève Shirley Fan Robert W Follett Paula S. Azevedo Thomas Ganslandt Noelia García Barrio Lana X. Garmire Nils Gehlenborg Alon Geva Tobias Gradinger Alexandre Gramfort Romain Griffier Nicolas Griffon Olivier Grisel David A. Hanauer Christian Haverkamp Bing He Darren W. Henderson Martin Hilka John H. Holmes Petar Horki Kenneth M. Huling Meghan R. Hutch Richard Issitt Anne‐Sophie Jannot Vianney Jouhet Ramakanth Kavuluru Mark S. Keller Katie Kirchoff

Abstract Neurological complications worsen outcomes in COVID-19. To define the prevalence of neurological conditions among hospitalized patients with a positive SARS-CoV-2 reverse transcription polymerase chain reaction test geographically diverse multinational populations during early pandemic, we used electronic health records (EHR) from 338 participating hospitals across 6 countries and 3 continents (January–September 2020) for cross-sectional analysis. We assessed frequency International...

10.1038/s41598-021-99481-9 article EN cc-by Scientific Reports 2021-10-12

ABSTRACT Objectives To perform an international comparison of the trajectory laboratory values among hospitalized patients with COVID-19 who develop severe disease and identify optimal timing value collection to predict severity across hospitals regions. Design Retrospective cohort study. Setting The Consortium for Clinical Characterization by EHR (4CE), multi-site data-sharing collaborative 342 in US Europe. Participants Patients COVID-19, admitted before or after PCR-confirmed result...

10.1101/2020.12.16.20247684 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2020-12-18

The Demonstrator study aims to analyse comorbidities and rare diseases among patients from German university hospitals within the Medical Informatics Initiative. This work aimed design determine feasibility of a model assess quality claims data used in study. Several issues were identified affecting small amounts cases one participating sites. As next step an extension all sites is planned.

10.3233/shti190508 article EN Studies in health technology and informatics 2019-01-01

Abstract Ventilation heterogeneity is frequent in bronchial asthma and can be assessed using multiple breath wash-out testing (MBW). Most data available paediatric patients nitrogen as a tracer gas. We aimed to evaluate sulphur hexafluoride (SF 6 ) MBW adult asthmatics. Spirometry, whole-body plethysmography, impulse oscillometry SF -MBW were prospectively performed. parameters reflecting global (lung clearance index, LCI), acinar (S acin conductive cond ventilation derived from three...

10.1038/s41598-020-58538-x article EN cc-by Scientific Reports 2020-01-30

Abstract This study aimed to investigate whether the differences in pain perception between patients with borderline personality disorder (BPD) and healthy subjects (HCs) can be explained by glutamate/GABA ratio posterior insula. In total, 29 BPD 31 HCs were included statistical analysis. Mechanical sensitivity was experimentally assessed pinprick stimuli 32 512 mN on a numeric rating scale. The metabolites measured right insula using MEshcher–GArwood Point-RESolved Spectroscopy sequence for...

10.1097/j.pain.0000000000001641 article EN Pain 2019-06-05

Arterial spin labeling (ASL) is a functional neuroimaging technique that has been frequently used to investigate acute pain states. A major advantage of ASL as opposed blood-oxygen-level-dependent its applicability for low-frequency designs. As such, represents an interesting option studies in which repeating experimental event would reduce ecological validity. Whereas most so far have thermal stimuli, our knowledge, no study investigated responses sharp mechanical pain.As proof concept, we...

10.1002/brb3.2442 article EN Brain and Behavior 2021-12-08

<b>Background:</b> Ventilation heterogeneity is frequent in obstructive lung disease and can be assessed using multiple breath washout testing (MBW). In bronchial asthma, most data available pediatric collectives N<sub>2</sub> as tracer gas suffering from several technical issues. We therefore aimed to evaluate the feasibility of MBW sulfur hexafluoride (SF<sub>6</sub>) adult asthmatic patients. <b>Methods:</b> parameters reflecting global (lung clearance index, LCI), acinar...

10.1183/13993003.congress-2019.pa349 article EN 05.02 - Monitoring airway disease 2019-09-28

Hintergrund: Ventilationsinhomogenitäten sind bei Patienten mit obstruktiven Lungenerkrankungen häufig und können mittels multiple breath washout-Verfahren (MBW) beurteilt werden. Bei Asthma bronchiale wurden die meisten Daten in pädiatrischen Kollektiven unter Verwendung von Stickstoff als Tracergas erhoben, was zahlreichen technischen Problemen behaftet ist. Ziel unserer Arbeit war es daher Durchführbarkeit eines auf Schwefelhexafluorid (SF6) basierenden MBW-Systems erwachsenen...

10.1055/s-0039-3403086 article DE Pneumologie 2020-02-28
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