Juan C. Castaneda

ORCID: 0000-0003-0622-7831
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About
Contact & Profiles
Research Areas
  • DNA Repair Mechanisms
  • DNA and Nucleic Acid Chemistry
  • PARP inhibition in cancer therapy
  • Microtubule and mitosis dynamics
  • Pancreatitis Pathology and Treatment
  • Genomics and Chromatin Dynamics
  • CRISPR and Genetic Engineering
  • RNA modifications and cancer

Memorial Sloan Kettering Cancer Center
2021-2022

Cornell University
2022

Weill Cornell Medicine
2022

The DNA sliding clamp proliferating cell nuclear antigen (PCNA) is an essential co-factor for many eukaryotic metabolic enzymes. PCNA loaded around by the ATP-dependent loader replication factor C (RFC), which acts at single-stranded (ss)/double-stranded (dsDNA) junctions harboring a recessed 3’ end (3’ ss/dsDNA junctions) and nicks. To illuminate loading mechanism we have investigated structure of RFC:PCNA bound to ATPγS or nicked using cryogenic electron microscopy. Unexpectedly, observe...

10.7554/elife.78253 article EN cc-by eLife 2022-08-08

Abstract 5’ single-stranded/double-stranded DNA serve as loading sites for the checkpoint clamp, 9-1-1, which mediates activation of apical kinase, ATR Mec1 . However, basis 9-1-1’s recruitment to junctions is unclear. Here, we present structures yeast clamp loader, Rad24-RFC, in complex with 9-1-1 and a junction post-ATP-hydrolysis state. Unexpectedly, adopts both closed planar open states presence Rad24-RFC DNA. Moreover, associates opposite orientation processivity loaders Rad24...

10.1101/2021.09.13.460164 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2021-09-15

Abstract The DNA sliding clamp proliferating cell nuclear antigen (PCNA) is an essential co-factor for many eukaryotic metabolic enzymes. PCNA loaded around by the ATP-dependent loader replication factor C (RFC), which acts at single-stranded/double-stranded junctions harboring a recessed 3’ end (3’ ss/dsDNA junctions) and nicks. To illuminate loading mechanism we have investigated structure of RFC:PCNA bound to ATPγS or nicked using cryogenic electron microscopy. Unexpectedly, observe open...

10.1101/2022.02.09.479782 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-02-09
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