Willem A. M. Wybo

ORCID: 0000-0003-1385-4980
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About
Contact & Profiles
Research Areas
  • Neural dynamics and brain function
  • Advanced Memory and Neural Computing
  • Cell Image Analysis Techniques
  • Neuroscience and Neuropharmacology Research
  • Neural Networks and Applications
  • Advanced Fluorescence Microscopy Techniques
  • Neuroscience and Neural Engineering
  • stochastic dynamics and bifurcation
  • EEG and Brain-Computer Interfaces
  • Neurobiology and Insect Physiology Research
  • Forest Insect Ecology and Management
  • Slime Mold and Myxomycetes Research
  • Lipid Membrane Structure and Behavior
  • Model Reduction and Neural Networks
  • Neural Networks and Reservoir Computing
  • Forest Ecology and Biodiversity Studies
  • Photoreceptor and optogenetics research

Ernst Ruska Centre
2025

University of Bern
2019-2024

Forschungszentrum Jülich
2023-2024

Jülich Aachen Research Alliance
2023

University of Cambridge
2021

École Polytechnique Fédérale de Lausanne
2013-2019

Highlights•Neural computation relies on compartmentalized dendrites to discern inputs•A method is described systematically derive the degree of compartmentalization•There are substantially fewer functional compartments than dendritic branches•Compartmentalization dynamic and can be tuned by synaptic inputsSummaryThe tree neurons plays an important role in information processing brain. While it thought that require independent subunits perform most their computations, still not understood how...

10.1016/j.celrep.2019.01.074 article EN cc-by-nc-nd Cell Reports 2019-02-01

Dendrites shape information flow in neurons. Yet, there is little consensus on the level of spatial complexity at which they operate. Through carefully chosen parameter fits, solvable least-squares sense, we obtain accurate reduced compartmental models any complexity. We show that (back-propagating) action potentials, Ca2+ spikes, and N-methyl-D-aspartate spikes can all be reproduced with few compartments. also investigate whether afferent connectivity motifs admit simplification by ablating...

10.7554/elife.60936 article EN cc-by eLife 2021-01-26

While sensory representations in the brain depend on context, it remains unclear how such modulations are implemented at biophysical level, and processing layers further hierarchy can extract useful features for each possible contextual state. Here, we demonstrate that dendritic N-Methyl-D-Aspartate spikes can, within physiological constraints, implement modulation of feedforward processing. Such neuron-specific exploit prior knowledge, encoded stable weights, to achieve transfer learning...

10.1073/pnas.2300558120 article EN cc-by Proceedings of the National Academy of Sciences 2023-07-31

Mounting experimental evidence suggests the hypothesis that brain-state-specific neural mechanisms, supported by connectome shaped evolution, could play a crucial role in integrating past and contextual knowledge with current, incoming flow of (e.g., from sensory systems). These mechanisms would operate across multiple spatial temporal scales, necessitating dedicated support at levels individual neurons synapses. A notable feature within neocortex is structure large, deep pyramidal neurons,...

10.3389/fncom.2025.1566196 article EN cc-by Frontiers in Computational Neuroscience 2025-05-20

How sensory information is interpreted depends on context. Yet, how context shapes processing in the brain remains elusive. To investigate this question, we combined computational modeling and vivo functional imaging of cortical neurons mice during reversal learning a tactile discrimination task. During learning, layer 2/3 somatosensory enhanced their response to reward-predictive stimuli, explainable as gain amplification from apical dendrites. Reward-prediction errors were reduced...

10.1101/2024.09.30.615819 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2024-10-01

We prove that when a class of partial differential equations, generalized from the cable equation, is defined on tree graphs and inputs are restricted to spatially discrete, well chosen set points, Green’s function (GF) formalism can be rewritten scale as [Formula: see text] with number n locations, contrary previously reported scaling. show linear scaling combined an expansion remaining kernels sums exponentials allow efficient simulations equations aforementioned class. furthermore...

10.1162/neco_a_00788 article EN Neural Computation 2015-11-24

Signal propagation in the dendrites of many neurons, including cortical pyramidal neurons sensory cortex, is characterized by strong attenuation toward soma. In contrast, using dual whole-cell recordings from apical dendrite and soma layer 5 (L5) anterior cingulate cortex (ACC) adult male mice we found good coupling, particularly slow subthreshold potentials like NMDA spikes or trains EPSPs to Only fastest ACC were reduced a similar degree as primary somatosensory revealing differential...

10.1523/jneurosci.3028-19.2020 article EN cc-by-nc-sa Journal of Neuroscience 2020-10-12

A fundamental function of cortical circuits is the integration information from different sources to form a reliable basis for behavior. While animals behave as if they optimally integrate according Bayesian probability theory, implementation required computations in biological substrate remains unclear. We propose novel, view on dynamics conductance-based neurons and synapses which suggests that are naturally equipped perform integration. In our approach apical dendrites represent prior...

10.1371/journal.pcbi.1012047 article EN cc-by PLoS Computational Biology 2024-06-12

Mounting experimental evidence suggests that brain-state-specific neural mechanisms, supported by connectomic architectures, play a crucial role in integrating past and contextual knowledge with the current, incoming flow of (e.g., from sensory systems). These mechanisms operate across multiple spatial temporal scales, necessitating dedicated support at levels individual neurons synapses. A notable feature within neocortex is structure large, deep pyramidal neurons, which exhibit distinctive...

10.48550/arxiv.2311.06074 preprint EN other-oa arXiv (Cornell University) 2023-01-01

Abstract While sensory representations in the brain depend on context, it remains unclear how such modulations are implemented at biophysical level, and processing layers further hierarchy can extract useful features for each possible contextual state. Here, we first demonstrate that thin dendritic branches well suited to implementing modulation of feedforward processing. Such neuron-specific exploit prior knowledge, encoded stable weights, achieve transfer learning across contexts. In a...

10.1101/2022.11.25.517941 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-11-26

Abstract Dendrites shape information flow in neurons. Yet, there is little consensus on the level of spatial complexity at which they operate. We present a flexible and fast method to obtain simplified neuron models any complexity. Through carefully chosen parameter fits, solvable least squares sense, we optimal reduced compartmental models. show that (back-propagating) action potentials, calcium-spikes NMDA-spikes can all be reproduced with few compartments. also investigate whether...

10.1101/2020.04.06.028183 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-04-07

Faithful reconstructions of cortical microcircuits allow the characterization synaptic pathways along with specific dendritic regions that they target on post-synaptic neurons [2]. But given this information, question remains how integrate or discriminate between distinct inputs impinging at spatially segregated locations their dendrites. Here, we investigated and under which circumstances targeting in dendrites can interact. We followed an analytical approach, starting a Volterra...

10.1186/1471-2202-14-s1-p140 article EN cc-by BMC Neuroscience 2013-07-01

A fundamental function of cortical circuits is the integration information from different sources to form a reliable basis for behavior. While animals behave as if they optimally integrate according Bayesian probability theory, implementation required computations in biological substrate remains unclear. We propose novel, view on dynamics conductance-based neurons and synapses which suggests that are naturally equipped perform integration. In our approach apical dendrites represent prior...

10.48550/arxiv.2104.13238 preprint EN other-oa arXiv (Cornell University) 2021-01-01

We prove that when a class of partial differential equations, generalized from the cable equation, is defined on tree graphs, and inputs are restricted to spatially discrete, well chosen set points, Green's function (GF) formalism can be rewritten scale as $O(n)$ with number $n$ input locations, contrary previously reported $O(n^2)$ scaling. show linear scaling combined an expansion remaining kernels sums exponentials, allow efficient simulations equations aforementioned class. furthermore...

10.48550/arxiv.1504.03746 preprint EN other-oa arXiv (Cornell University) 2015-01-01

Event Abstract Back to A sparse reformulation of the Green's function formalism allows efficient simulations morphological neuron models Willem Wybo1*, Daniele Boccalini2, Benjamin Torben-Nielsen1, 3 and Marc-Oliver Gewaltig1 1 École polytechnique fédérale de Lausanne, Brain Mind Institute, Switzerland 2 Mathematics Institute for Geometry Applications, Okinawa Science Technology, Japan Neurons are spatially extended structures with an elaborate dendritic tree that integrates spatio-temporal...

10.3389/conf.fnsys.2014.05.00035 article EN cc-by Frontiers in Systems Neuroscience 2014-01-01

Neurons are spatially extended structures that receive and process inputs on their dendrites. It is generally accepted neuronal computations arise from the active integration of synaptic along a dendrite between input location spike generation in axon initial segment. However, many application such as simulations brain networks, use point-neurons --neurons without morphological component-- computational units to keep conceptual complexity costs low. Inevitably, these applications thus omit...

10.48550/arxiv.1309.2382 preprint EN other-oa arXiv (Cornell University) 2013-01-01

Abstract The dendritic trees of neurons play an important role in the information processing brain. While it is tacitly assumed that dendrites require independent compartments to perform most their computational functions, still not understood how they compartmentalize into functional subunits. Here we show these subunits can be deduced from structural and electrical properties dendrites. We devised a mathematical formalism links arborization impedance-based tree-graph topology this reveals...

10.1101/244772 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2018-01-08
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