Keda Yang

ORCID: 0009-0001-9368-9737
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About
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Research Areas
  • Nanopore and Nanochannel Transport Studies
  • Block Copolymer Self-Assembly
  • Spectroscopy and Quantum Chemical Studies
  • Rheology and Fluid Dynamics Studies
  • Membrane Separation Technologies
  • Fuel Cells and Related Materials
  • Surfactants and Colloidal Systems
  • Computational Drug Discovery Methods
  • Electrostatics and Colloid Interactions
  • Machine Learning in Materials Science
  • Material Dynamics and Properties
  • Polymer crystallization and properties
  • Supramolecular Self-Assembly in Materials
  • bioluminescence and chemiluminescence research
  • Chemistry and Chemical Engineering
  • Biosensors and Analytical Detection
  • Microfluidic and Capillary Electrophoresis Applications
  • Carbon Nanotubes in Composites
  • Membrane-based Ion Separation Techniques
  • Terahertz technology and applications
  • Conducting polymers and applications
  • Advanced biosensing and bioanalysis techniques
  • Mechanical and Optical Resonators
  • Theoretical and Computational Physics
  • RNA Interference and Gene Delivery

Zhejiang Shuren University
2023-2024

Chinese Academy of Sciences
2012-2016

Computer Network Information Center
2014-2016

State Key Laboratory of Polymer Physics and Chemistry
2012-2013

Beijing National Laboratory for Molecular Sciences
2012-2013

Institute of Chemistry
2013

Artificial intelligence (AI) is an effective tool to accelerate drug discovery and cut costs in processes. Many successful AI applications are reported the early stages of small molecule discovery. However, most those require a deep understanding software hardware, focus on single field that implies data normalization transfer between still challenge for normal users. It usually limits application Here, based series robust models, we formed one-stop, general purpose, AI-based platform,...

10.1021/acs.jcim.3c01979 article EN cc-by-nc-nd Journal of Chemical Information and Modeling 2024-04-02

We employed dissipative particle dynamics simulations to explore the phase behavior of T-shaped ternary amphiphiles composed rodlike cores connected by two incompatible end chains and side grafted segments. By fine-tuning number terminal lateral beads, three diagrams for model systems with different chain lengths are constructed in terms temperature length, which have some common features mostly compare favorably experimental studies exception a couple new phases. It is worthwhile highlight...

10.1021/jp405677u article EN The Journal of Physical Chemistry B 2013-06-28

Molecular property prediction holds significant importance in drug discovery, enabling the identification of biologically active compounds with favorable drug-like properties. However, low data problem, arising from scarcity labeled poses a substantial obstacle for accurate predictions. To address this challenge, we introduce novel architecture, AttFPGNN-MAML, few-shot molecular prediction. The proposed approach incorporates hybrid feature representation to enrich representations and model...

10.1021/acsomega.4c02147 article EN cc-by-nc-nd ACS Omega 2024-05-23

10.1016/j.physe.2024.116037 article EN Physica E Low-dimensional Systems and Nanostructures 2024-06-25

Unlike macroscale systems, symmetry breaking could lead to surprising results for nanoscale systems.

10.1039/c4ra07034h article EN RSC Advances 2014-01-01

The transport of water molecules through carbon nanotubes (CNTs) is primary importance for understanding water-mediated biological activities as well the design novel nanoporous materials. Herein, we analyze flow CNTs by using molecular dynamics simulations with hope finding basic parameters determining value. Of particular interest that a simple equation function diffusion, occupancy and CNT size, can describe different sizes. Specifically, both simulation exhibit power law relations...

10.1002/cphc.201500575 article EN ChemPhysChem 2015-09-08

We use molecular dynamics simulations to analyze the single-file transport behavior of a simple liquid through narrow membrane channel. With decrease liquid-channel interaction, flow exhibits remarkable maximum owing competition liquid-liquid and interactions. Surprisingly, this is coupled sudden reduce occupancy, where particle moving channel alone at nearly constant velocity, rather than in collective motion mode. Further investigation on encountered energy barrier suggests that should be...

10.1039/c5cp07253k article EN Physical Chemistry Chemical Physics 2016-01-01

Benefitting from the rigid backbone and π–π stacking interactions, arylene ethynylene macrocycles (AEMs) have a high tendency toward stable nanotube assembly, which brings about potential in transmembrane channel use. Herein, we use molecular dynamics simulations to study transport properties of water molecules through such macrocycle (MNT) embedded DPPC bilayer membrane. For comparison, also consider structurally less complex carbon (CNT) with similar size. We find that due spatial...

10.1039/c3ra43545h article EN RSC Advances 2013-10-28

Although great effort has been made on the transport properties of water molecules through nanometer channels, our understanding effect some basic parameters are still rather poor. In this article, we use molecular dynamics simulations to study temperature single‐file a hydrophobic channel. Of particular interest is that flow and average translocation time both exhibit exponential relations with temperature. Based continuous‐time random‐walk model Arrhenius equation, explore new physical...

10.1002/jcc.24303 article EN Journal of Computational Chemistry 2016-01-17

Terahertz electromagnetic field greatly affects the transport of single-file water molecules through a carbon nanotube.

10.1039/d3cp03075j article EN Physical Chemistry Chemical Physics 2023-01-01

The design of a water pump, which has huge potential for applications in nanotechnology and daily life, is the dream many scientists. In this paper, we successfully nanometer pump by using molecular dynamics simulations. Ions either sodium or chlorine narrow channel will generate electric current under fields, then drives through wider channel, similar to recent experimental setups. Considerable flux achieved within small field strengths that are accessible experimentation. Of particular...

10.1088/0957-4484/27/9/095701 article EN Nanotechnology 2016-01-29

Abstract We introduce a complete implementation of viscoelastic model for numerical simulations the phase separation kinetics in dynamic asymmetry systems such as polymer blends and solutions on graphics processing unit (GPU) by CUDA language discuss algorithms optimizations details. From studies solution, we show that GPU‐based can predict correctly accepted results provide about 190 times speedup over single central (CPU). Further accuracy analysis demonstrates both double precision...

10.1002/jcc.22990 article EN Journal of Computational Chemistry 2012-04-19

AbstractIn this paper, we introduce a complete implementation for efficient and large-scale dissipative particle dynamics (DPD) simulation on Graphics Processing Unit (GPU). The is designed optimized according to the nature of DPD technique also takes fully advantage computational power GPUs. From studies benchmarks, show that GPU-based can predict results correctly provide nearly 60 times speedup over LAMMPS single Central (CPU) core. By using novel divide-and-conquer (D&C) algorithm reduce...

10.1080/1539445x.2013.858359 article EN Soft Materials 2013-12-11

The surface properties of nanoparticles (NPs) are key factors for their design and use in biomedicine; however, our understanding the effect on translocation NPs through membranes is still rather poor. Herein, we have used molecular dynamics simulations to study a polymer-grafted NP fluidic channel. We change length, number, amount charge position grafted polymers. With increase polymer flux decreases as whole due size, where -NP fails at smallest because strong binding Na(+). Surprisingly,...

10.1088/0957-4484/25/18/185703 article EN Nanotechnology 2014-04-15

A series of polyurethanes (PU-GT) were prepared using polyglycolide-block-polytetrahydrofuran-block-polyglycolide (PGA-PTHF-PGA), polytetrahydrofuran homopolymer (PTHF), glycerol, and hexamethylene diisocyanate (HDI) by a one-pot synthesis method. The non-isothermal crystallization subsequent heating curves showed that the PTHF component in these could crystallize temperature range −11.5~2.6 °C during cooling process, melting temperatures crystallites 24.0~26.9 °C. WAXD results implied small...

10.3390/polym16243610 article EN Polymers 2024-12-23
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