Meiqi Shang

ORCID: 0009-0004-4953-2291
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About
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Research Areas
  • CRISPR and Genetic Engineering
  • Photosynthetic Processes and Mechanisms
  • RNA modifications and cancer
  • RNA and protein synthesis mechanisms
  • Plant Virus Research Studies
  • Genetic Associations and Epidemiology
  • Evolution and Genetic Dynamics
  • Genetic diversity and population structure
  • Viral gastroenteritis research and epidemiology
  • Plant biochemistry and biosynthesis
  • Cervical Cancer and HPV Research
  • RNA regulation and disease
  • Bacteriophages and microbial interactions
  • Genomics and Phylogenetic Studies
  • Cancer Mechanisms and Therapy
  • Chromosomal and Genetic Variations
  • Viral Infections and Immunology Research
  • Genetic Mapping and Diversity in Plants and Animals
  • RNA Research and Splicing
  • Antioxidant Activity and Oxidative Stress

Washington University in St. Louis
2025

Queen's University
2025

China Agricultural University
2024-2025

Ministry of Agriculture and Rural Affairs
2025

University of Science and Technology of China
2024

Chinese Academy of Agricultural Sciences
2021-2022

China National Rice Research Institute
2021-2022

Summary Carotenoid‐rich orange‐fleshed sweet potato (OFSP) is an important staple diet and source of nutrition in developing countries, including Africa Asia. However, the regulation carotenoid biosynthesis remains to be better understood. A natural allelic variation closely linked was identified promoter region IbbHLH25 gene that encodes a basic helix–loop–helix (bHLH) transcription factor, by transcriptome haplotype analyses different flesh colour accessions. An 86‐bp deletion reduced...

10.1111/pbi.70086 article EN cc-by-nc-nd Plant Biotechnology Journal 2025-04-10

ABSTRACT We surveyed single nucleotide variant (SNV) patterns from 5 903 647 complete SARS‐CoV‐2 genomes. Among 10 012 SNVs, APOBEC‐mediated C‐to‐U (C > U) deamination was the most prevalent, followed by G U and other RNA editing‐related substitutions including (A G, C, A). However, C mutations were less frequent in functional regions, for example, S protein, intrinsic disordered nonsynonymous mutations, where over‐represented. Notably, G‐loss rarely appeared together. Instead, G‐gain...

10.1002/jmv.70353 article EN cc-by Journal of Medical Virology 2025-04-01

ABSTRACT Persimmon is a BE1 subcluster bacteriophage infecting Streptomyces lividans with siphoviral morphology and was isolated from soil sample. The genome of has length 131,421 bp, 231 protein-coding genes, 50.0% GC content that differs the isolation host high content.

10.1128/mra.00024-25 article EN Microbiology Resource Announcements 2025-04-29

Summary The advent of full‐length transcriptome sequencing technologies has accelerated the discovery novel splicing isoforms. However, existing alternative (AS) tools are either tailored for short‐read RNA‐Seq data or designed human and animal studies. disparities in AS patterns between plants animals still pose a challenge to reliable identification functional exploration isoforms plants. Here, we developed integrated analysis (iFLAS), plant‐optimized toolkit that introduced...

10.1111/nph.19554 article EN New Phytologist 2024-01-30

Abstract Investigating the divergence time between different populations has been of fundamental interest in evolution biology. In this study, we reanalysed mitochondrial and Y chromosome DNA 1000 Genomes Project, revealed that most single nucleotide polymorphisms (SNPs) are specific to minority would be classified as low-frequency mutations. Using these polymorphisms, recalculated by direct comparison individuals out-group.

10.1101/2021.04.04.438302 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2021-04-04
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