Oliver Toth

ORCID: 0009-0004-8345-6210
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About
Contact & Profiles
Research Areas
  • DNA and Nucleic Acid Chemistry
  • Metal complexes synthesis and properties
  • Advanced biosensing and bioanalysis techniques
  • Bacteriophages and microbial interactions
  • DNA Repair Mechanisms
  • Photochemistry and Electron Transfer Studies
  • Genomics and Phylogenetic Studies
  • Gut microbiota and health

École Polytechnique Fédérale de Lausanne
2023

The impact of an 8-oxoguanine (8oxoG) defect on the redox properties DNA within nucleosome core particle (NCP) was investigated employing hybrid quantum mechanical/molecular mechanics (QM/MM) molecular dynamics simulations native and 8oxoG-containing NCP systems with explicit representation a biologically relevant environment. Two distinct positions varying solvent accessibility were considered for 8oxoG insertion. In both cases, it is found that presence drastically decreases free energy...

10.1021/acs.jctc.3c01013 article EN cc-by Journal of Chemical Theory and Computation 2023-11-14

The impact of an 8-oxoguanine (8oxoG) defect on the redox properties DNA within Nucleosome Core Particle (NCP) was investigated employing hybrid Quantum Mechanical/Molecular Mechanics (QM/MM) molecular dynamics simulations native and 8oxoG-containing NCP systems with explicit representation a biologically relevant environment. Two distinct positions varying solvent accessibility were considered for 8oxoG insertion. In both cases, it is found that presence drastically decreases free energy...

10.26434/chemrxiv-2023-9djz2-v2 preprint EN cc-by 2023-09-12

The impact of an 8-oxoguanine (8oxoG) defect on the redox properties DNA within Nucleosome Core Particle (NCP) structure was investigated employing hybrid Quantum Mechanical/Molecular Mechanics (QM/MM) molecular dynamics simulations native and 8oxoG-containing NCP systems with explicit representation a biologically relevant environment. Two distinct positions were considered for 8oxoG insertion. In both cases, it is found that presence drastically decreases free energy oxidation, by roughly...

10.26434/chemrxiv-2023-9djz2 preprint EN cc-by 2023-03-08
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