Frederic Jonske

ORCID: 0000-0001-8622-6673
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About
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Research Areas
  • Radiomics and Machine Learning in Medical Imaging
  • Advanced X-ray and CT Imaging
  • Digital Radiography and Breast Imaging
  • AI in cancer detection
  • COVID-19 diagnosis using AI
  • Medical Imaging and Analysis
  • Artificial Intelligence in Healthcare and Education
  • Medical Image Segmentation Techniques
  • Biomedical Text Mining and Ontologies
  • Topic Modeling
  • Domain Adaptation and Few-Shot Learning
  • Online Learning and Analytics
  • Radiopharmaceutical Chemistry and Applications
  • Advanced Neural Network Applications
  • Artificial Intelligence in Healthcare
  • Genetics, Bioinformatics, and Biomedical Research
  • Medical Imaging Techniques and Applications
  • Prostate Cancer Treatment and Research

Computer Algorithms for Medicine
2022

The aim of this study was to systematically evaluate the effect thresholding algorithms used in computer vision for quantification prostate-specific membrane antigen positron emission tomography (PET) derived tumor volume (PSMA-TV) patients with advanced prostate cancer. results were validated respect prognostication overall survival advanced-stage

10.1007/s00259-023-06163-x article EN cc-by European Journal of Nuclear Medicine and Molecular Imaging 2023-03-02

Abstract Objectives Over the course of their treatment, patients often switch hospitals, requiring staff at new hospital to import external imaging studies local database. In this study, authors present MOdality Mapping and Orchestration (MOMO), a Deep Learning–based approach automate mapping process by combining metadata analysis neural network ensemble. Methods A set 11,934 series with existing anatomical labels was retrieved from PACS database train an ensemble networks (DenseNet-161...

10.1007/s00330-022-08926-w article EN cc-by European Radiology 2022-07-05
Jianning Li Antonio Pepe Christina Gsaxner Gijs Luijten Yuan Jin and 95 more Narmada Ambigapathy Enrico Nasca Naida Solak Gian Marco Melito Afaque Rafique Memon Xiaojun Chen Jan S. Kirschke Ezequiel de la Rosa Patrich Ferndinand Christ Hongwei Li David Ellis Michele R. Aizenberg Sergios Gatidis Thomas Kuestner Nadya Shusharina Nicholas Heller Vincent Andrearczyk Adrien Depeursinge Mathieu Hatt Anjany Sekuboyina Maximilian Loeffler Hans Liebl Reuben Dorent Tom Vercauteren Jonathan Shapey Aaron Kujawa S. Cornelissen Patrick Langenhuizen Achraf Ben-Hamadou Ahmed Rekik Sergi Pujades Edmond Boyer Federico Bolelli Costantino Grana Luca Lumetti Hamidreza Salehi Jun Ma Yao Zhang Ramtin Gharleghi Susann Beier Arcot Sowmya Eduardo A. Garza‐Villarreal Thania Balducci Diego Ángeles-Valdéz Roberto Souza Letícia Rittner Richard Frayne Yuanfeng Ji Soumick Chatterjee Andreas Nuernberger João Pedrosa Carlos Ferreira Guilherme Aresta A. Cunha Aurélio Campilho Yannick Suter José García Alain Lalande Emmanuel Audenaert Claudia Krebs Timo van Leeuwen Evie Vereecke Rainer Roehrig Frank Hoelzle Vahid Badeli Kathrin Krieger Matthias Gunzer Jianxu Chen Amin Dada Miriam Balzer Jana Fragemann Frederic Jonske Moritz Rempe Stanislav Malorodov Fin Hendrik Bahnsen Constantin Seibold Alexander Jaus Ana Sofia Santos Mariana Lindo André Ferreira Victor Alves Michael Kamp Amr Abourayya Felix Nensa Fabian Hoerst Alexander Brehmer Lukas Heine Lars Erik Podleska Matthias A. Fink Julius Keyl Konstantinos Tserpes Moon Kim Shireen Elhabian Hans Lamecker Dženan Zukić

Prior to the deep learning era, shape was commonly used describe objects. Nowadays, state-of-the-art (SOTA) algorithms in medical imaging are predominantly diverging from computer vision, where voxel grids, meshes, point clouds, and implicit surface models used. This is seen numerous shape-related publications premier vision conferences as well growing popularity of ShapeNet (about 51,300 models) Princeton ModelNet (127,915 models). For domain, we present a large collection anatomical shapes...

10.48550/arxiv.2308.16139 preprint EN cc-by arXiv (Cornell University) 2023-01-01

Given the rapidly expanding capabilities of generative AI models for radiology, there is a need robust metrics that can accurately measure quality AI-generated radiology reports across diverse hospitals. We develop ReXamine-Global, LLM-powered, multi-site framework tests different writing styles and patient populations, exposing gaps in their generalization. First, our method whether metric undesirably sensitive to reporting style, providing scores depending on are stylistically similar...

10.48550/arxiv.2408.16208 preprint EN arXiv (Cornell University) 2024-08-28

It is an open secret that ImageNet treated as the panacea of pretraining. Particularly in medical machine learning, models not trained from scratch are often finetuned based on ImageNet-pretrained models. We posit pretraining data domain downstream task should almost always be preferred instead. leverage RadNet-12M, a dataset containing more than 12 million computed tomography (CT) image slices, to explore efficacy self-supervised and natural images. Our experiments cover intra- cross-domain...

10.48550/arxiv.2306.17555 preprint EN other-oa arXiv (Cornell University) 2023-01-01

Patients regularly continue assessment or treatment in other facilities than they began them in, receiving their previous imaging studies as a CD-ROM and requiring clinical staff at the new hospital to import these into local database. However, between different facilities, standards for nomenclature, contents, even medical procedures may vary, often human intervention accurately classify received context of recipient hospital's standards. In this study, authors present MOMO (MOdality...

10.48550/arxiv.2112.00661 preprint EN other-oa arXiv (Cornell University) 2021-01-01
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