Sidney L. Shaw

ORCID: 0000-0001-9195-6128
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About
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Research Areas
  • Microtubule and mitosis dynamics
  • Plant Reproductive Biology
  • Plant Molecular Biology Research
  • Photosynthetic Processes and Mechanisms
  • Plant nutrient uptake and metabolism
  • Polysaccharides and Plant Cell Walls
  • Advanced Fluorescence Microscopy Techniques
  • Legume Nitrogen Fixing Symbiosis
  • Cellular Mechanics and Interactions
  • Fungal and yeast genetics research
  • Bacterial Infections and Vaccines
  • Genomics and Chromatin Dynamics
  • Pneumonia and Respiratory Infections
  • Protist diversity and phylogeny
  • Bacterial Genetics and Biotechnology
  • Cell Image Analysis Techniques
  • Plant tissue culture and regeneration
  • Streptococcal Infections and Treatments
  • Advanced Mathematical Modeling in Engineering
  • Nuclear Structure and Function
  • Neurobiology and Insect Physiology Research
  • Ubiquitin and proteasome pathways
  • Differential Equations and Numerical Methods
  • Plant responses to water stress
  • Carbohydrate Chemistry and Synthesis

Indiana University Bloomington
2013-2024

Imaging Center
2018

Indiana University
2009-2016

University of North Carolina at Chapel Hill
1996-2013

Stanford University
1998-2006

Harvard University
2004

Carnegie Department of Plant Biology
2003

Howard Hughes Medical Institute
2000-2003

Carnegie Institution for Science
2003

University of Colorado Boulder
1990

Plant cells create highly structured microtubule arrays at the cell cortex without a central organizing center to anchor ends. In vivo imaging of individual microtubules in Arabidopsis plants revealed that new are initiated and exhibit dynamics both Polymerization-biased dynamic instability one end slow depolymerization other result sustained migration across by hybrid treadmilling mechanism. This motility causes widespread repositioning contributes changes array organization through...

10.1126/science.1083529 article EN Science 2003-04-29

Summary Establishment of the Rhizobium –legume symbiosis depends on a molecular dialogue, in which rhizobial nodulation (Nod) factors act as symbiotic signals, playing key role control specificity infection and nodule formation. Using nodulation‐defective (Nod − ) mutants Medicago truncatula to study mechanisms controlling Nod factor perception signalling, we have previously identified five genes that components factor‐activated signal transduction pathway. Characterisation new M. mutant led...

10.1046/j.1365-313x.2003.01743.x article EN The Plant Journal 2003-05-01

Localization of dynein-green fluorescent protein (GFP) to cytoplasmic microtubules allowed us obtain one the first views dynamic properties astral in live budding yeast. Several novel aspects microtubule function were revealed by time-lapse, three-dimensional fluorescence microscopy. Astral microtubules, about four six number for each pole, exhibited asynchronous instability throughout cell cycle, growing at approximately 0.3-1.5 micron/min toward surface then switching shortening similar...

10.1083/jcb.139.4.985 article EN The Journal of Cell Biology 1997-11-17

Bacterial flagella are highly conserved molecular machines that have been extensively studied for assembly, function and gene regulation. Less is how why bacteria differ based on the number arrangement of they synthesize. Here we explore cell biology peritrichous in model bacterium Bacillus subtilis by fluorescently labelling flagellar basal bodies, hooks filaments. We find average B. assembles approximately 26 bodies show body controlled SwrA. Basal assembled rapidly (< 5 min) but assembly...

10.1111/mmi.12103 article EN Molecular Microbiology 2012-11-29

Significance This study answers two long-standing questions about FtsZ dynamics and its relationship to septal peptidoglycan (PG) synthesis in Streptococcus pneumoniae . In previous models, concertedly moves from midcell septa MapZ rings that have reached the equators of daughter cells. Instead, results presented here show FtsZ, FtsA, EzrA filaments/bundles move continuously out early as part rings. addition, this establishes movement bPBP2x:FtsW complexes PG depends on likely mirrors new is...

10.1073/pnas.1816018116 article EN cc-by Proceedings of the National Academy of Sciences 2019-02-04

Bacterial cell shapes are manifestations of programs carried out by multi-protein machines that synthesize and remodel the resilient peptidoglycan (PG) mesh other polymers surrounding cells. GpsB protein is conserved in low-GC Gram-positive bacteria not essential rod-shaped Bacillus subtilis, where it plays a role shuttling penicillin-binding proteins (PBPs) between septal side-wall sites PG synthesis. In contrast, we report here ellipsoid-shaped, ovococcal Streptococcus pneumoniae...

10.1111/mmi.12408 article EN Molecular Microbiology 2013-10-12

Abstract Modulation of intracellular calcium levels plays a key role in the transduction many biological signals. Here, we characterize early responses wild-type and mutant Medicago truncatula plants to nodulation factors produced by bacterial symbiont Sinorhizobium meliloti using dual-dye ratiometric imaging technique. When presented with 1 nm Nod factor, root hair cells exhibited only previously described spiking response initiating 10 min after application. factor (10 nm) elicited an...

10.1104/pp.005546 article EN PLANT PHYSIOLOGY 2003-03-01

Hydrogen peroxide (H(2)O(2)) efflux was measured from Medicago truncatula root segments exposed to purified Nod factor and poly-GalUA (PGA) heptamers. factor, at concentrations > 100 pM, reduced H(2)O(2) rates 60% of baseline levels beginning 20 30 min after exposure, whereas the PGA elicitor, 75 nM, caused a rapid increase in >200% rates. Pretreatment plants with alters effect by limiting maximum rate 125% that observed for untreated plants. Two factor-related compounds showed no ability...

10.1104/pp.103.021113 article EN PLANT PHYSIOLOGY 2003-08-01

As the legume-rhizobia symbiosis is established, plant recognizes bacterial-signaling molecules, Nod factors (NFs), and initiates transcriptional developmental changes within root to allow bacterial invasion construction of a novel organ, nodule. Plant mutants defective in nodule initiation (Nod - ) are thought have defects NF-signal transduction. However, it unknown whether WT plants respond NF-independent bacterial-derived signals or show global symbiosis-associated gene expression. To...

10.1073/pnas.0402186101 article EN Proceedings of the National Academy of Sciences 2004-06-25

Abstract The Arabidopsis thaliana MAP65-1 and MAP65-2 genes are members of the larger eukaryotic MAP65/ASE1/PRC gene family microtubule-associated proteins. We created fluorescent protein fusions driven by native promoters that colocalized to a subset interphase microtubule bundles in all epidermal hypocotyl cells. labeling was highly dynamic within bundles, showing episodes linear extension retraction coincident with growth shortening. Dynamic colocalization MAP65-1/2 polymerizing...

10.1105/tpc.111.084970 article EN The Plant Cell 2011-05-01

Summary The relative localization patterns of class B penicillin‐binding proteins Pbp2x and Pbp2b were used as positional indicators septal peripheral (side‐wall‐like) peptidoglycan ( PG ) synthesis, respectively, in the mid‐cell regions S treptococcus pneumoniae cells at different stages division. We confirm that are essential strain D 39 genetic background, which differs from laboratory strains. show , like A Pbp1a follows a pattern than FtsZ remains division septa after reappears equators...

10.1111/mmi.12745 article EN Molecular Microbiology 2014-08-06

Abstract The acentriolar cortical microtubule arrays in dark-grown hypocotyl cells organize into a transverse coaligned pattern that is critical for axial plant growth. In light-grown Arabidopsis thaliana seedlings, the array on outer (periclinal) cell face creates variety of patterns with significant bias (&amp;gt;3:1) microtubules polymerizing edge-ward and side (anticlinal) faces cell. To study mechanisms required creating coalignment, we developed dual-hormone protocol synchronously...

10.1105/tpc.112.107326 article EN The Plant Cell 2013-02-01

ABSTRACT In this study, we investigate the role of polar secretion and resulting asymmetry in cell wall establishing polarity Fucus zygotes. We have utilized brefeldin-A to selectively interrupt Golgi-derived material into as assayed by toluidine blue O staining sulfated fucoidin. show that is targeted a cortical site zygote identified localization actin filaments dihydropyridine receptors. The deposition at target temporally coincident with required for axis fixation. propose local...

10.1242/dev.122.9.2623 article EN Development 1996-09-01

Localization of mRNA is a well-described mechanism to account for the asymmetric distribution proteins in polarized somatic cells and embryos animals. In zygotes brown alga Fucus, F-actin localized at site polar growth accumulates cell plates first two divisions embryo. We used nonradioactive, whole-mount situ hybridization protocol show pattern actin localization. Until division, localization identical that total poly(A)+ RNA, is, symmetrical zygote followed by an actin-dependent...

10.1105/tpc.8.2.189 article EN The Plant Cell 1996-02-01

The bipolar budding pattern of a /α Saccharomyces cerevisiae cells appears to depend on persistent spatial markers in the cell cortex at two poles cell. Previous analysis mutants with specific defects identifiedBUD8 and BUD9 as potentially encoding components distal proximal birth scar, respectively. Further genetic reported here supports this hypothesis. Mutants deleted for BUD8 orBUD9 grow normally but bud exclusively from poles, respectively, double-mutant phenotype suggests that pathway...

10.1091/mbc.12.8.2497 article EN Molecular Biology of the Cell 2001-08-01

Flowering plants evolved an array of environmental sensors important for guiding adaptive morphological responses. The response to elevated ambient temperature involves the thermo-conversion light-sensing protein, PHYTOCHROME B (PhyB), leading activation nuclear transcription factor, INTERACTING FACTOR 4 (PIF4). Here we employ and light treatments dissect role WAVE DAMPENED2-LIKE (WDL4), a microtubule associated cytoplasmic in modulating this signaling pathway. WDL4 mutant ( wdl4-3 )...

10.1101/2025.03.10.641267 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2025-03-13

Abstract Fluorescent microspheres were used as material markers to investigate the relative rates of cell surface expansion at growing tips Medicago truncatula root hairs. From analysis tip shape and microsphere movements, we propose three characteristic zones in The center apical dome is an area 1- 2-μm diameter with relatively constant curvature high growth rate. Distal apex a more rapidly expanding region 1 2 μm width exhibiting surges off-axis growth. This middle forms annulus maximum...

10.1104/pp.124.3.959 article EN PLANT PHYSIOLOGY 2000-11-01

Abstract Wall expansion in tip-growing cells shows variations according to position and direction. In Medicago truncatula root hairs, wall exhibits a strong meridional gradient with maximum near the pole of cell. Root hair also show striking anisotropy, i.e. over most dome surface rate circumferential exceeds expansion. Concomitant measurements rates stresses reveal that extensibility cell must vary abruptly along meridian maintain To determine mechanical basis we compared patterns predicted...

10.1104/pp.104.043752 article EN PLANT PHYSIOLOGY 2004-10-01
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