A5067416796- Plant Molecular Biology Research
- GABA and Rice Research
- Plant Gene Expression Analysis
- Biofuel production and bioconversion
- Genetic Mapping and Diversity in Plants and Animals
- Seed and Plant Biochemistry
- Plant Disease Resistance and Genetics
- Plant nutrient uptake and metabolism
- Photosynthetic Processes and Mechanisms
- Microbial Metabolites in Food Biotechnology
- Insect Resistance and Genetics
- Plant Pathogens and Fungal Diseases
- Chromosomal and Genetic Variations
- Plant Genetic and Mutation Studies
- Plant-Microbe Interactions and Immunity
- Magnetic and Electromagnetic Effects
- Genomics and Phylogenetic Studies
- Food composition and properties
- Plant Reproductive Biology
- Plant Stress Responses and Tolerance
- Transgenic Plants and Applications
- Wastewater Treatment and Nitrogen Removal
- Plant responses to water stress
- Enzyme Production and Characterization
- Insect Pest Control Strategies
Guizhou University
2017-2024
Guangzhou Institute of Geochemistry
2020-2024
Chinese Academy of Sciences
2020-2024
University of Chinese Academy of Sciences
2020-2024
Institute of Crop Sciences
2019-2020
Chinese Academy of Agricultural Sciences
2019-2020
Sichuan Agricultural University
2011-2016
National University of Singapore
1997-1998
Institute of Molecular and Cell Biology
1997-1998
Abstract Background The WRKY gene family is one of the largest families transcription factors in higher plants, and play important roles plant growth development as well response to abiotic stresses; however, pea has not been systematically reported. Results In this study, 89 genes were identified named according random distribution PsWRKY on seven chromosomes. was found have nine pairs tandem duplicates 19 segment duplicates. Phylogenetic analyses 60 Arabidopsis proteins performed determine...
Almost complete 16S rRNA sequences from seven Thermomonospora strains, curvata, formosensis, fusca, mesophila, chromogena, alba and mesouviformis (a synonym of alba) were determined subjected to phylogenetic analysis together with the all representative members suborder Streptosporangineae. On basis phylogenetic, chemotaxonomic phenotypic evidence, transfer is proposed formosensis genus Actinomadura as comb. nov., mesophila Microbispora fusca a new genus, Thermobifida gen. which belongs...
The nutritional value of Tartary buckwheat is much higher than that common buckwheat. rich in nutrients, some them unique, and has good medicinal properties. It also serves as a feed crop. This review aims to provide an up-to-date comprehensive literature on buckwheat's active substances (proteins, polyphenols, D-chiro-inositol, fat-soluble substances, resistant starch, dietary fiber, minerals vitamins), (e.g., prevention AIDS, treatment cancer, cardiovascular cerebrovascular diseases)...
Abstract Background GRAS, an important family of transcription factors, have played pivotal roles in regulating numerous intriguing biological processes plant development and abiotic stress responses. Since the sequencing sorghum genome, a plethora genetic studies were mainly focused on genomic information. The indepth identification or genome-wide analysis GRAS genes, especially Sorghum bicolor , rarely been studied. Results A total 81 SbGRAS genes identified based S. genome. They named...
Golden buckwheat (Fagopyrum dibotrys or Fagopyrum cymosum) and Tartary tataricum) belong to the Polygonaceae genus is rich in flavonoids. a wild relative of buckwheat, yet golden traditional Chinese herbal medicine food crop. The genetic basis adaptive divergence between these two buckwheats poorly understood. Here, we assembled high-quality chromosome-level genome found one-to-one syntenic relationship with chromosomes buckwheat. Two large inversions were identified that differentiate...
Oats (Avena sativa L.) are a widely consumed functional cereal grain worldwide and have recently gained increasing attention due to their numerous health benefits. an excellent natural source of bioactive compounds, including β-glucan, broad application prospects for the development foods or products prevent treat diabetes. In this review, oat proteins, peptides, amino acids, β-glucans, resistant starch, dietary fibers, polyunsaturated fatty vitamins, minerals, polyphenols, avenanthramides,...
Abstract Background SPL transcription factors play vital roles in regulating plant growth, development, and abiotic stress responses. Sugar beet ( Beta vulgaris L.), one of the world’s main sugar-producing crops, is a major source edible industrial sugars for humans. Although gene family has been extensively identified other species, no reports on sugar are available. Results Eight BvSPL genes were at whole-genome level renamed based their positions chromosome. The structure, SBP domain...
We determined almost complete 16S ribosomal DNA sequences for 12 actinomycete strains which were either previously classified as Kitasatospora or defined Streptomyces but shown to contain major amounts of meso-diaminopimelic acid in their whole-cell hydrolysates. These subjected phylogenetic analyses together with the 34 species. Phylogenetic trees reconstructed by using both neighbor-joining and maximum-parsimony methods. The species always formed a stable monophyletic clade. However, genus...
Basic helix-loop-helix (bHLH) is a superfamily of transcription factors that widely found in plants and animals, the second largest factor family eukaryotes after MYB. They have been shown to be important regulatory components tissue development many different biological processes. However, no systemic analysis bHLH has yet reported Sorghum bicolor.
Transcription factors (TFs) play important roles in plants. Among the major TFs, GATA plays a crucial role plant development, growth, and stress responses. However, there have been few studies on gene family foxtail millet (Setaria italica). The release of reference genome presents an opportunity for genome-wide characterization these genes.In this study, we identified 28 genes distributed seven chromosomes. According to classification method members Arabidopsis, SiGATA was divided into four...
Abstract Background Among the major transcription factors, SPL plays a crucial role in plant growth, development, and stress response. Foxtail millet ( Setaria italica ), as C4 crop, is rich nutrients beneficial to human health. However, research on foxtail (SQUAMOSA PROMOTER BINDING-LIKE) gene family limited. Results In this study, total of 18 genes were identified for comprehensive analysis whole genome millet. These SiSPL divided into seven subfamilies (I, II, III, V, VI, VII, VIII)...
Abstract Foxtail millet ( Setaria italica ) is rich in nutrients and extremely beneficial to human health. We identified comprehensively analyzed 89 MADS-box genes the foxtail genome. According classification of Arabidopsis thaliana rice, Si were divided into M-type (37) MIKC-type (52). During evolution, differentiation occurred before that monocotyledons dicotyledons. The gene structure has undergone much differentiation, number introns subfamily greater than subfamily. Analysis duplication...
The second-largest transcription factor superfamily in plants is that of the basic helix-loop-helix (bHLH) family, which plays an important complex physiological role plant growth, tissue development, and environmental adaptation. Systematic research on Chenopodium quinoa bHLH family will enable a better understanding this species. Herein, authors used variety bioinformatics methods quantitative Real-Time Polymerase Chain Reaction (qRT-PCR) to explore evolution function 218 CqbHLH genes...
Carotenoid cleavage oxygenases (CCOs) convert carotenoids into volatile aromatic compounds implicated in plant growth and development. They affect the synthesis of hormones, including abscisic acid (ABA) strigolactone (SL). However, CCO family Tartary buckwheat remains unelucidated. We identified FtCCO gene based on genomic data analyzed biological function genes using bioinformatics methods expression pattern fluorescence quantitative PCR. Three pairs fragment duplication were found FtCCOs,...
Members of the basic helix-loop-helix (bHLH) transcription factor family perform indispensable functions in various biological processes, such as plant growth, seed maturation, and abiotic stress responses. However, bHLH foxtail millet (Setaria italica), an important food feed crop, has not been thoroughly studied.In this study, 187 genes (SibHLHs) were identified renamed according to chromosomal distribution SibHLH genes. Based on number conserved domains gene structure, divided into 21...
GRAS transcription factors perform indispensable functions in various biological processes, such as plant growth, fruit development, and biotic abiotic stress responses. The development of whole-genome sequencing has allowed the gene family to be identified characterized many species. However, thorough in-depth identification or systematic analysis genes foxtail millet not been conducted.In this study, 57 (SiGRASs) were renamed according chromosomal distribution SiGRAS genes. Based on number...
The GATA family of transcription factors is zinc finger DNA binding proteins involved in a variety biological processes, including plant growth and development response to biotic/abiotic stresses, thus play an essential role environmental changes. However, the gene Sorghum (SbGATA) has not been systematically analyzed reported yet. Herein, we used bioinformatics methods quantitative Real-Time Polymerase Chain Reaction (qRT-PCR) explore evolution function 33 SbGATA genes identified. These...
Rutin, a flavonoid rich in buckwheat, is important for human health and plant resistance to external stresses. The hydrolysis of rutin quercetin underlies the bitter taste Tartary buckwheat. In order identify genes, 200 genotypes mini-core buckwheat germplasm resource was re-sequenced with 30-fold coverage depth. By combining content intermediate metabolites metabolism genome resequencing data, metabolite genome-wide association analyses (GWAS) eventually identified glycosyl hydrolase gene...
GATA is a transcription factor that exerts vital function in plant growth and development, physiological metabolism, environmental responses. However, the gene family has rarely been studied Tartary buckwheat since completion of its genome. This study used bioinformatics methods to identify genes analyze their subfamily classification, structural composition, developmental evolution, as well discuss expression patterns FtGATA different subfamilies. The twenty-eight identified genome were...