- Ecology and Vegetation Dynamics Studies
- Species Distribution and Climate Change
- Botany and Plant Ecology Studies
- Plant and animal studies
- Genetic and phenotypic traits in livestock
- Advanced Statistical Methods and Models
- Genetic Mapping and Diversity in Plants and Animals
- Bioinformatics and Genomic Networks
- Geology and Paleoclimatology Research
- Peatlands and Wetlands Ecology
- Lichen and fungal ecology
- Sensory Analysis and Statistical Methods
- Environmental Toxicology and Ecotoxicology
- Gene expression and cancer classification
- Geochemistry and Geologic Mapping
- Spectroscopy and Chemometric Analyses
- Environmental Conservation and Management
- Soil Geostatistics and Mapping
- Forest Ecology and Biodiversity Studies
- Statistical Methods and Bayesian Inference
- Wildlife Ecology and Conservation
- Hydrology and Watershed Management Studies
- Animal Nutrition and Physiology
- Statistical Methods and Applications
- Hydrology and Sediment Transport Processes
Wageningen University & Research
2016-2025
Zimmer Biomet (United States)
2025
Water Authority of Jordan
2023
John Wiley & Sons (United States)
2018
Ecological Society of America
2018
Zimmer Biomet (Netherlands)
2002-2011
Centre for BioSystems Genomics
2010
Imperial College London
2002
Vrije Universiteit Amsterdam
2002
University of Amsterdam
2002
Palaeolimnological diatom data comprise counts of many species expressed as percentages for each sample. Reconstruction past lake-water pH from such involves two steps; (i) regression, where responses modern abundances to are modelled and (ii) calibration the used infer assemblages preserved in lake sediments. In view highly multivariate nature data, strongly nonlinear response diatoms pH, abundance zero values a compromise between ecological realism computational feasability is essential....
Article Accelerating Markov Chain Monte Carlo Simulation by Differential Evolution with Self-Adaptive Randomized Subspace Sampling was published on March 1, 2009 in the journal International Journal of Nonlinear Sciences and Numerical (volume 10, issue 3).
Several permutation strategies are often possible for tests of individual terms in analysis-of-variance (ANOVA) designs. These include restricted permutations, whole groups units, some form residuals or combination these. It is unclear, especially complex designs involving random factors, mixed models nested hierarchies, just which strategy should be used any particular test. The purpose this paper two-fold: (i) we provide a guideline constructing an exact strategy, where possible, term...
Automated annotation of protein function is challenging. As the number sequenced genomes rapidly grows, overwhelming majority products can only be annotated computationally. If computational predictions are to relied upon, it crucial that accuracy these methods high. Here we report results from first large-scale community-based critical assessment (CAFA) experiment. Fifty-four representing state art for prediction were evaluated on a target set 866 proteins 11 organisms. Two findings stand...
There is increasing consensus in the hydrologic literature that an appropriate framework for streamflow forecasting and simulation should include explicit recognition of forcing parameter model structural error. This paper presents a novel Markov chain Monte Carlo (MCMC) sampler, entitled differential evolution adaptive Metropolis (DREAM), especially designed to efficiently estimate posterior probability density function parameters complex, high‐dimensional sampling problems. MCMC scheme...
Abstract In this paper a novel multivariate method is proposed for the analysis of community response data from designed experiments repeatedly sampled in time. The long-term effects insecticide chlorpyrifos on invertebrate and dissolved oxygen (DO)–pH–alkalinity–conductivity syndrome, outdoor experimental ditches, are used as example data. new method, which we have named principal curve (PRC), based redundancy (RDA), adjusted overall changes over time, observed control test systems. This...
Bibliographical notes 26 2.9 Exercise 2.10 Solution to the exercise 27 /f 5 .~\Ordination 91 < \5Jr--/ Introduction §-l-J) Aim and usage \T^Z Data approximation response models in ordination 93 5.1.3Outline of Chapter 5.2 Correspondence analysis (CA) detrended correspondence (DCA) 95 5.2.1 From weighted averaging 5.2.2 Two-way algorithm 5.2.3 Diagonal structures: properties faults 103 5,2.4/Detrended 5727$/ Joint plot species sites 108 5.2.6 Block structures sensitivity rare 109 5.2.7...
Canonical community ordination comprises a collection of methods that relate species assemblages to their environment, in both observational studies and designed experiments. differs from sensu stricto environment data are analyzed simultaneously. Part I reviews the theory non-mathematical way with emphasis on new insights for interpretation diagrams. The depends method used create diagram. After basic theory, is focused diagrams linear canonical ordination, particular principal component...