Albert Siryaporn

ORCID: 0000-0002-2056-9937
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About
Contact & Profiles
Research Areas
  • Bacterial biofilms and quorum sensing
  • Bacteriophages and microbial interactions
  • Antimicrobial Peptides and Activities
  • Microfluidic and Bio-sensing Technologies
  • Bacterial Genetics and Biotechnology
  • Diffusion and Search Dynamics
  • Cell Image Analysis Techniques
  • Vibrio bacteria research studies
  • Slime Mold and Myxomycetes Research
  • Immune Response and Inflammation
  • Antibiotic Resistance in Bacteria
  • Evolution and Genetic Dynamics
  • RNA and protein synthesis mechanisms
  • Micro and Nano Robotics
  • Neutrophil, Myeloperoxidase and Oxidative Mechanisms
  • Gene Regulatory Network Analysis
  • Lipid Membrane Structure and Behavior
  • Fractal and DNA sequence analysis
  • Advanced Fluorescence Microscopy Techniques
  • Advanced Electron Microscopy Techniques and Applications
  • Biosensors and Analytical Detection
  • Legionella and Acanthamoeba research
  • Microbial Community Ecology and Physiology
  • Phytochemistry and Bioactivity Studies
  • Plant and Biological Electrophysiology Studies

University of California, Irvine
2017-2025

Princeton University
2012-2019

Institute of Macromolecular Chemistry
2013

University of Pennsylvania
2008-2012

Brown University
2007

Quorum sensing is a chemical communication process that bacteria use to regulate collective behaviors. Disabling quorum-sensing circuits with small molecules has been proposed as potential strategy prevent bacterial pathogenicity. The human pathogen Pseudomonas aeruginosa uses quorum control virulence and biofilm formation. Here, we analyze synthetic for inhibition of the two P. receptors, LasR RhlR. Our most effective compound, meta-bromo-thiolactone (mBTL), inhibits both production factor...

10.1073/pnas.1316981110 article EN Proceedings of the National Academy of Sciences 2013-10-18

Summary Quantitative spatial distributions of ribosomes (S2‐YFP) and RNA polymerase (RNAP; β′‐yGFP) in live Escherichia coli are measured by superresolution fluorescence microscopy. In moderate growth conditions, nucleoid–ribosome segregation is strong, RNAP localizes to the nucleoid lobes. The mean copy numbers per cell 4600 RNAPs 55 000 ribosomes. Only 10–15% lie within densest part lobes, at most 4% two ribosome‐rich endcaps. predominant observed diffusion coefficient D ribo = 0.04 µm 2 s...

10.1111/j.1365-2958.2012.08081.x article EN Molecular Microbiology 2012-05-24

Significance Pseudomonas aeruginosa is a pathogen that kills remarkably wide range of hosts. The environmental cues regulate P. virulence have remained unclear. Here, we develop rapid imaging-based assay to quantify virulence. We find association with rigid surfaces induces toward multiple Virulence induction depends on the mechanical, but not chemical, properties and requires surface-exposed protein PilY1, which has homology mechanosensitive von Willebrand factor A domain. Specific mutation...

10.1073/pnas.1415712111 article EN Proceedings of the National Academy of Sciences 2014-11-10

Many bacteria possess large numbers of two-component signalling systems, which are composed histidine kinase-response regulator pairs. The high level sequence similarity between some systems raises the possibility undesired cross-talk a kinase and non-cognate response regulator. Although molecular specificity ensures that phospho-transfer occurs primarily correct partners, even low inappropriate could lead to unacceptable levels noise or interference in signal transduction. To explore...

10.1111/j.1365-2958.2008.06426.x article EN Molecular Microbiology 2008-08-29

Bacteria inhabit a wide variety of environments in which fluid flow is present, including healthcare and food processing settings the vasculature animals plants. The motility bacteria on surfaces presence has not been well characterized. Here we focus Pseudomonas aeruginosa, an opportunistic human pathogen that thrives conditions such as catheters respiratory tracts. We investigate effects P. aeruginosa cells describe mechanism surface shear stress orients surface-attached along direction,...

10.1016/j.bpj.2012.05.045 article EN publisher-specific-oa Biophysical Journal 2012-07-01

We investigate the effect of bacteriophage infection and antibiotic treatment on coordination swarming, a collective form flagellum- pilus-mediated motility in bacteria. show that phage opportunistic bacterial pathogen Pseudomonas aeruginosa abolishes swarming infected subpopulation induces release quinolone signaling molecule PQS, which repulses uninfected subpopulations from approaching area. These mechanisms have overall limiting to subpopulation, promotes survival population. Antibiotic...

10.1128/jb.00383-19 article EN Journal of Bacteriology 2019-08-26

Abstract First proposed as antimicrobial agents, histones were later recognized for their role in condensing chromosomes. Histone activity has been reported innate immune responses. However, how kill bacteria remained elusive. The co-localization of with peptides (AMPs) cells suggests that may be part a larger mechanism vivo. Here we report histone H2A enters E. coli and S. aureus through membrane pores formed by the AMPs LL-37 magainin-2. enhances AMP-induced pores, depolarizes bacterial...

10.1038/s41467-020-17699-z article EN cc-by Nature Communications 2020-08-04

The development of new approaches for the treatment antimicrobial-resistant infections is an urgent public health priority. Pseudomonas aeruginosa pathogen, in particular, a leading source infection hospital settings, with few available options. In context effort to develop antivirulence strategies combat bacterial infection, we identified series highly effective small molecules that inhibit production pyocyanin, redox-active virulence factor produced by P. aeruginosa. Interestingly, these...

10.1021/jm5015082 article EN Journal of Medicinal Chemistry 2015-01-18

The rise of antibiotic resistance requires the development new strategies to combat bacterial infection and pathogenesis. A major direction has been drugs that broadly target virulence. However, few targets have identified due species-specific nature many virulence regulators. lack a regulator is conserved across species presented further challenge therapeutics. Here, we identify NADH activity an important role in induction pathogen P. aeruginosa . This finding, coupled with ubiquity...

10.1128/mbio.02730-18 article EN cc-by mBio 2020-03-09

Understanding bacterial physiology in real-world environments requires noninvasive approaches and is a challenging yet necessary endeavor to effectively treat infectious disease. Bacteria evolve strategies tolerate chemical gradients associated with infections. The DIVER (Deep Imaging Via Enhanced Recovery) microscope can image autofluorescence fluorescence lifetime throughout samples high optical scattering, enabling the study of naturally formed intact biofilms. Using DIVER, long...

10.1021/acsinfecdis.4c00489 article EN cc-by-nc-nd ACS Infectious Diseases 2025-03-04

We have evolved a robust two‐component signal transduction pathway from sensor kinase (SK) and non‐partner response regulator (RR) that show weak cross‐talk in vitro no detectable vivo wild‐type strains. The SK, CpxA, is bifunctional, with both phosphatase activities for its partner RR. by combining small number of mutations CpxA individually increase phosphorylation the RR OmpR, activity against phospho‐OmpR emerges. resulting circuit also becomes responsive to input CpxA. effects these...

10.1038/msb.2010.105 article EN cc-by-nc-sa Molecular Systems Biology 2010-01-01

Summary Each P seudomonas aeruginosa cell localizes two types of motility structures, a single flagellum and one or clusters type IV pili, to the poles. Previous studies suggested that these structures arrive at pole through distinct mechanisms. Here we performed swimming screen identify polar localization factors discovered three genes homologous TonB / ExbB ExbD complex have defects in both flagella‐mediated pilus‐mediated twitching motility. We found deletion tonB3 , PA 2983 2982 led...

10.1111/mmi.12403 article EN Molecular Microbiology 2013-10-08

The mechanical properties of bacteria are important for protecting cells against physical stress. cell wall is the best-characterized cellular element contributing to bacterial mechanics; however, biochemistry underlying its regulation and assembly still not completely understood. Using a unique high-throughput biophysical assay, we identified genes coding proteins that modulate stiffness in opportunistic human pathogen Pseudomonas aeruginosa . This approach enabled us discover with roles...

10.1128/mbio.01340-18 article EN cc-by mBio 2018-09-10

Previously described selective plane illumination microscopy techniques typically offset ease of use and sample handling for maximum imaging performance or vice versa. Also, to reduce cost complexity while maximizing flexibility, it is highly desirable implement light sheet such that can be added a standard research microscope instead setting up dedicated system. We devised new approach termed sideSPIM provides uncompromised easy while, at the same time, offering applications towards...

10.1364/boe.8.003918 article EN cc-by Biomedical Optics Express 2017-08-01

Swarming is a collective bacterial behavior in which dense population of cells moves over porous surface, resulting the expansion population. This can guide bacteria away from potential stressors such as antibiotics and viruses. However, mechanisms responsible for organization swarms are not understood. Here, we briefly review models that based on sensing fluid mechanics proposed to swarming pathogenic bacterium

10.1016/j.cossms.2023.101080 article EN cc-by Current Opinion in Solid State and Materials Science 2023-04-29

Significance Bacteria colonize surfaces and form dense biofilm communities in natural infection settings where flow is present. The physical mechanisms that give rise to the spatial organization of biofilms are not understood. Here, we show bacterium Pseudomonas aeruginosa uses a process have termed dynamic switching efficiently disperse throughout network maximize colonization. This dictates cells during transition from individual multicellular communities. Thus, establishes initial...

10.1073/pnas.1718813115 article EN Proceedings of the National Academy of Sciences 2018-05-07

Pseudomonas aeruginosa is an opportunistic, multidrug-resistant, human pathogen that forms biofilms in environments with fluid flow, such as the lungs of cystic fibrosis patients, industrial pipelines, and medical devices. P. twitches upstream on surfaces by cyclic extension retraction its mechanoresponsive type IV pili motility appendages. The prevention motility, host invasion, infectious biofilm formation flow systems remains unmet challenge. Here, we describe design application scalable...

10.1021/acsami.8b22262 article EN ACS Applied Materials & Interfaces 2019-02-21
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