Cameron Hyde

ORCID: 0000-0002-5913-9766
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About
Contact & Profiles
Research Areas
  • Crustacean biology and ecology
  • Aquaculture Nutrition and Growth
  • Neurobiology and Insect Physiology Research
  • Research Data Management Practices
  • Scientific Computing and Data Management
  • RNA and protein synthesis mechanisms
  • Animal Genetics and Reproduction
  • Genetics, Bioinformatics, and Biomedical Research
  • Marine Biology and Ecology Research
  • Chemical Synthesis and Analysis
  • Fungal and yeast genetics research
  • Invertebrate Immune Response Mechanisms
  • Insect Utilization and Effects
  • Advanced Proteomics Techniques and Applications
  • Metabolomics and Mass Spectrometry Studies
  • Plant and animal studies
  • Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
  • Advanced Data Storage Technologies
  • Genomics and Phylogenetic Studies
  • Viral Infectious Diseases and Gene Expression in Insects
  • Insect and Arachnid Ecology and Behavior
  • Identification and Quantification in Food
  • Monoclonal and Polyclonal Antibodies Research
  • Mass Spectrometry Techniques and Applications
  • Ubiquitin and proteasome pathways

The University of Queensland
2022-2024

University of the Sunshine Coast
2018-2023

Queensland Cyber Infrastructure Foundation
2023

Enis Afgan Anton Nekrutenko Björn Grüning Daniel Blankenberg Jeremy Goecks and 95 more Michael C. Schatz Alexander Ostrovsky Alexandru Mahmoud Andrew Lonie Anna Syme Anne Fouilloux Anthony Bretaudeau Anton Nekrutenko Anup Kumar Arthur C. Eschenlauer Assunta D DeSanto Aysam Guerler Beatriz Serrano‐Solano Bérénice Batut Björn Grüning Bradley W. Langhorst Bridget Carr Bryan Raubenolt Cameron Hyde Catherine J. Bromhead Christopher B. Barnett Coline Royaux Cristóbal Gallardo Daniel Blankenberg Daniel Fornika Dannon Baker Dave Bouvier Dave Clements David Anderson de Lima Morais David López Tabernero Delphine Larivière Engy Nasr Enis Afgan Federico Zambelli Florian Heyl Fotis Psomopoulos Frederik Coppens Gareth Price Gianmauro Cuccuru Gildas Le Corguillé Greg Von Kuster Gulsum Gudukbay Akbulut Helena Rasche Hans-Rudolf Hotz Ignacio Eguinoa Igor V. Makunin Isuru Ranawaka James Taylor Jayadev Joshi Jennifer Hillman‐Jackson Jeremy Goecks John Chilton Kaivan Kamali Keith Suderman Krzysztof Poterlowicz Le Bras Yvan Lucille Lopez‐Delisle Luke Sargent Madeline E. Bassetti M. A. Tangaro Marius van den Beek Martin Čech Matthias Bernt Matthias Fahrner Mehmet Tekman Melanie Christine Föll Michael C. Schatz Michael R. Crusoe Miguel Roncoroni Natalie Kucher Nate Coraor Nicholas Stoler Nick Rhodes Nicola Soranzo Niko Pinter Nuwan Goonasekera Pablo Moreno Pavankumar Videm Mélanie Pétéra Pietro Mandreoli Pratik Jagtap Qiang Gu Ralf J. M. Weber Ross Lazarus Ruben H.P. Vorderman Saskia Hiltemann Sergey Golitsynskiy Shilpa Garg Simon Bray Simon Gladman Simone Leo Subina Mehta Timothy J. Griffin Vahid Jalili Yves Vandenbrouck

Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues use, maintain contribute the project, support from multiple national infrastructure providers that enable freely analysis training services. The Training Network supports free, self-directed, virtual >230 integrated tutorials. Project engagement metrics have continued grow...

10.1093/nar/gkac247 article EN cc-by Nucleic Acids Research 2022-04-14
Linelle Ann L Abueg Enis Afgan Olivier Allart Ahmed H Awan Wendi Bacon and 95 more Dannon Baker Madeline E. Bassetti Bérénice Batut Matthias Bernt Daniel Blankenberg Aureliano Bombarely Anthony Bretaudeau Catherine J. Bromhead Melissa L. Burke Patrick K Capon Martin Čech María Chavero-Díez John Chilton Tyler J Collins Frederik Coppens Nate Coraor Gianmauro Cuccuru Fabio Cumbo John Davis Paul F De Geest Willem de Koning Martin Demko Assunta D DeSanto José Manuel Domínguez Begines Maria Doyle Bert Droesbeke Anika Erxleben-Eggenhofer Melanie Christine Föll Giulio Formenti Anne Fouilloux Rendani Gangazhe Tanguy Genthon Jeremy Goecks Alejandra N Gonzalez Beltran Nuwan Goonasekera Nadia Goué Timothy J. Griffin Björn Grüning Aysam Guerler Sveinung Gundersen Ove Gustafsson Christina Hall Thomas W.R. Harrop Helge Hecht Alireza Heidari Tillman Heisner Florian Heyl Saskia Hiltemann Hans-Rudolf Hotz Cameron Hyde Pratik Jagtap Julia Jakiela James E. Johnson Jayadev Joshi Marie Jossé Khaled Jumah Matúš Kalaš Katarzyna Kamieniecka Tunc Kayikcioglu Markus Konkol Leonid Kostrykin Natalie Kucher Anup Kumar Mira Kuntz Delphine Larivière Ross Lazarus Yvan Le Bras Gildas Le Corguillé Justin Lee Simone Leo Leandro Liborio Romane Libouban David López Tabernero Lucille Lopez‐Delisle Laila S Los Alexandru Mahmoud Igor V. Makunin Pierre Marin Subina Mehta Winnie Mok Pablo Moreno François Morier-Genoud Stephen Mosher Teresa Müller Engy Nasr Anton Nekrutenko Tiffanie M Nelson Asime J Oba Alexander Ostrovsky Polina V Polunina Krzysztof Poterlowicz Elliott J. Price Gareth Price Helena Rasche Bryan Raubenolt

Abstract Galaxy (https://galaxyproject.org) is deployed globally, predominantly through free-to-use services, supporting user-driven research that broadens in scope each year. Users are attracted to public services by platform stability, tool and reference dataset diversity, training, support integration, which enables complex, reproducible, shareable data analysis. Applying the principles of user experience design (UXD), has driven improvements accessibility, discoverability...

10.1093/nar/gkae410 article EN cc-by Nucleic Acids Research 2024-05-20

In the face of rising global demand and unsustainable production methods, cultivated crustacean meat (CCM) is proposed as an alternative means to produce delicious lobster, shrimp, crab products. Cultivated requires starting stem cells that may vary in terms potency propensity proliferate or differentiate into myogenic (muscle-related) tissues. Recognizing regenerating limbs are a non-lethal source tissue harbor relevant cells, we selected those crayfish Cherax quadricarinatus our model. To...

10.3390/ijms25168623 article EN International Journal of Molecular Sciences 2024-08-07

Sexual development involves the successive and overlapping processes of sex determination, sexual differentiation, ultimately maturation, enabling animals to reproduce. This provides a mechanism for enriched genetic variation which enables populations withstand ever-changing environments, selecting adapted individuals driving speciation. The molecular mechanisms display bewildering diversity, even in closely related taxa. Many determination across include key family “doublesex- male...

10.3390/genes11101150 article EN Genes 2020-09-29

Abstract Transcriptome sequencing has opened the field of genomics to a wide variety researchers, owing its efficiency, applicability across species and ability quantify gene expression. The resulting datasets are rich source information that can be mined for many years into future, with each dataset providing unique angle on specific context in biology. Maintaining accessibility this accumulation data presents quite challenge researchers. primary focus conventional databases is storage,...

10.1186/s12864-020-07063-2 article EN cc-by BMC Genomics 2020-09-14

The Crustacea are an evolutionarily diverse taxon which underpins marine food webs and contributes significantly to the global economy. However, our knowledge of crustacean endocrinology development is far behind that terrestrial arthropods. Here we present a unique insight into molecular pathways coordinating metamorphosis, by reconciling nuclear receptor (NR) gene activity from 12-stage, 3-replicate transcriptome in ornate spiny lobster (Panulirus ornatus) during larval development.We...

10.1186/s12864-019-5925-5 article EN cc-by BMC Genomics 2019-06-28

Receptor avidity through multivalency is a highly sought-after property of ligands. While readily available in nature the form bivalent antibodies, this remains challenging to engineer synthetic molecules. The discovery several venom peptides containing two homologous and independently folded domains (in tandem repeat arrangement) has provided unique opportunity better understand underpinning design multimeric biomolecules, as well how naturally occurring multivalent ligands can be...

10.1002/pro.4566 article EN cc-by-nc-nd Protein Science 2023-01-16

In the face of rising global demand and unsustainable production methods, cultivated crustacean meat (CCM) is proposed as an alternative means to produce delicious lobster, shrimp crab products. Cultivated requires starting stem cells that may vary in terms potency, propensity proliferate or differentiate into myogenic (muscle-related) tissues. We suggest regenerating limbs harbor a range suitable for present humane tissue source because they can be accessed non-lethally. To investigate cell...

10.20944/preprints202407.0231.v1 preprint EN 2024-07-03

Abstract Background Hands-on training, whether in bioinformatics or other domains, often requires significant technical resources and knowledge to set up run. Instructors must have access powerful compute infrastructure that can support resource-intensive jobs running efficiently. Often this is achieved using a private server where there no contention for the queue. However, places prerequisite labor barrier instructors, who spend time coordinating deployment management of resources....

10.1093/gigascience/giad048 article EN cc-by GigaScience 2022-12-28

Abstract Background Transcriptomes present a rich, multi-dimensional subset of genomics data. They provide broad insights into genetic sequence, and more significantly gene expression, across biological samples. This technology is frequently employed for describing the response to experimental conditions has created vast libraries datasets which shed light on function different tissues, diseases, diets developmental stages in many species. However, public accessibility these data impeded by...

10.1186/s12864-024-10033-7 article EN cc-by BMC Genomics 2024-01-29

Abstract Receptor avidity through multivalency is a highly sought-after property of ligands. While readily available in nature the form bivalent antibodies, this remains challenging to engineer synthetic molecules. The discovery several venom peptides containing two homologous and independently folded domains (in tandem repeat arrangement) has provided unique opportunity better understand underpinning design multimeric biomolecules, as well how naturally occurring multivalent ligands can be...

10.1101/2022.01.17.476686 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-01-20
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