Takaki Yamauchi

ORCID: 0000-0002-6772-6506
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About
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Research Areas
  • Plant responses to water stress
  • Plant Stress Responses and Tolerance
  • Plant nutrient uptake and metabolism
  • Plant Molecular Biology Research
  • Coastal wetland ecosystem dynamics
  • Plant Water Relations and Carbon Dynamics
  • Plant Surface Properties and Treatments
  • Seismology and Earthquake Studies
  • Rice Cultivation and Yield Improvement
  • Seismic Waves and Analysis
  • Genetic Mapping and Diversity in Plants and Animals
  • CRISPR and Genetic Engineering
  • Photosynthetic Processes and Mechanisms
  • Tree Root and Stability Studies
  • Transgenic Plants and Applications
  • Seismic Imaging and Inversion Techniques
  • earthquake and tectonic studies
  • Plant tissue culture and regeneration
  • Chromosomal and Genetic Variations
  • Rock Mechanics and Modeling
  • Plant Genetic and Mutation Studies
  • Earthquake Detection and Analysis
  • Methane Hydrates and Related Phenomena
  • Plant Reproductive Biology
  • Urban and spatial planning

Nagoya University
2015-2025

The University of Tokyo
2009-2021

Japan Science and Technology Agency
2019-2021

Ishikawa Prefectural University
2015

Japan Society for the Promotion of Science
2013-2015

Japan Society for the Promotion of Science London
2015

National Institute for Basic Biology
2008-2014

Chiba University
2008-2014

Reactive oxygen species (ROS) produced by the NADPH oxidase, respiratory burst oxidase homolog (RBOH), trigger signal transduction in diverse biological processes plants. However, functions of RBOH homologs rice (Oryza sativa) and other gramineous plants are poorly understood. Ethylene induces formation lysigenous aerenchyma, which consists internal gas spaces created programmed cell death cortical cells, roots under oxygen-deficient conditions. Here, we report that, rice, one isoform...

10.1105/tpc.16.00976 article EN The Plant Cell 2017-03-28

Exposing plants to hypoxic conditions greatly improves their anoxic stress tolerance by enhancing the activities of glycolysis and fermentation in roots. Ethylene may also be involved these adaptive responses because its synthesis is increased roots under conditions. Here it reported that pre-treatment wheat seedlings with an ethylene precursor, 1-aminocyclopropanecarboxylic acid (ACC), enhanced accumulation seedlings, oxygen-deficient through increasing expression genes encoding ethanol...

10.1093/jxb/ert371 article EN cc-by Journal of Experimental Botany 2013-11-19

Lateral roots (LRs) are derived from a parental root and contribute to water nutrient uptake the soil. Auxin/indole-3-acetic acid protein (AUX/IAA; IAA) auxin response factor (ARF)-mediated signaling essential for LR formation. Lysigenous aerenchyma, gas space created by cortical cell death, aids internal oxygen transport within plants. Rice (Oryza sativa) forms lysigenous aerenchyma constitutively under aerobic conditions increases its formation oxygen-deficient conditions; however,...

10.1073/pnas.1907181116 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2019-09-23

Abstract Soil salinization and ground water depletion are increasingly constraining crop production. Identifying useful mechanisms of salt tolerance is an important step towards development salt-tolerant crops. Of particular interest that present in wild relatives, as they may have greater stress than species. The coastal species Vigna marina one the promising plant resources for tolerance. V. luteola another with diverse habitats including seaside riverbank, hereafter, luteola-beach...

10.1093/pcp/pcaf005 article EN Plant and Cell Physiology 2025-01-07

• To adapt to waterlogging in soil, some gramineous plants, such as maize (Zea mays), form lysigenous aerenchyma the root cortex. Ethylene, which is accumulated during waterlogging, promotes formation. However, molecular mechanism of formation not understood. The aim this study was identify formation-associated genes expressed roots a basis for understanding Maize plants were grown under waterlogged conditions, with or without pretreatment an ethylene perception inhibitor...

10.1111/j.1469-8137.2010.03535.x article EN New Phytologist 2010-11-22

Internal aeration is crucial for root growth in waterlogged soil. A barrier to radial oxygen loss (ROL) can enhance long-distance transport via the aerenchyma tip; a higher concentration at apex enables into anoxic The ROL formed within outer part of roots (OPR). Suberin and/or lignin deposited cell walls are thought contribute barrier, but it unclear which compound main constituent. This study describes gene expression profiles during formation rice determine relative responses suberin...

10.1093/jxb/eru235 article EN Journal of Experimental Botany 2014-06-09

Lysigenous aerenchyma, which develops by death and subsequent lysis of the cortical cells in roots, is essential for internal long-distance oxygen transport from shoot base to root tips plants waterlogged soil. Although many studies focus on amounts aerenchyma significance size cortex forms has received less research attention. In present study, we evaluated cross-sectional area each tissue adventitious roots upland crops, wheat (Triticum aestivum) maize (Zea mays ssp. mays), wetland crop,...

10.3389/fpls.2019.00259 article EN cc-by Frontiers in Plant Science 2019-03-29

Drought and flooding are contrasting abiotic stressors for plants. Evidence is accumulating root anatomical traits being essential the adaptation to drought or flooding. However, an integrated approach comprehensively understand has not yet been established. Here we analysed of 18 wild Poaceae species differing in a range soil water content. Regression model analyses revealed optimal that were required by plants adapt low high While area number each tissue (e.g. stele, cortex, xylem...

10.1111/nph.17093 article EN New Phytologist 2020-11-22

The shoot and root system architectures are fundamental for crop productivity. During the history of artificial selection domestication post-domestication breeding, architecture rice has significantly changed from its wild ancestor to fulfil requirements in agriculture. We review recent studies on developmental biology by focusing components determining plant architecture; meristems, leaves, tillers, stems, inflorescences roots. also highlight natural variations that affected these...

10.1270/jsbbs.22088 article EN Breeding Science 2023-01-01

Strigolactones (SLs) are a group of phytohormones that control plant growth and development including shoot branching. Previous studies the phenotypes SL-related rice (Oryza sativa) dwarf (d) mutants demonstrated SLs inhibit mesocotyl elongation by controlling cell division. Here, we found expression cytokinin (CK)-responsive type-A RESPONSE REGULATOR (RR) genes was higher in d10-1 d14-1 than wild type. However, CK levels mesocotyls d were not very different from those On other hand,...

10.1093/pcp/pct150 article EN Plant and Cell Physiology 2013-10-23

In roots of gramineous plants, lysigenous aerenchyma is created by the death and lysis cortical cells. Rice (Oryza sativa) constitutively forms under aerobic conditions, its formation further induced oxygen-deficient conditions. However, maize (Zea mays) develops only Ethylene involved in formation. Here, we investigated how ethylene-dependent differently regulated between rice maize. For this purpose, rice, used reduced culm number1 (rcn1) mutant, which ethylene biosynthesis suppressed....

10.1111/pce.12766 article EN Plant Cell & Environment 2016-05-12

We recently achieved targeted disruptions of cytoplasmic male sterility (CMS)-associated genes in the mitochondrial genomes rice and rapeseed by using mitochondria-targeted transcription activator-like effector nucleases (mitoTALENs). It was first report stable heritable gene modification plant genomes. Here, we attempted to use mitoTALENs disrupt two model Arabidopsis thaliana(Arabidopsis) three different promoters types TALENs. The targets were isoforms ATP synthase subunit 6 gene, atp6-1...

10.1111/tpj.15041 article EN The Plant Journal 2020-10-24

Auxin flow is important for different root developmental processes such as formation, emergence, elongation and gravitropism. However, the detailed information about mechanisms regulating auxin less well understood in rice. We characterized transport-related mutants, Ospin-formed2-1 (Ospin2-1) Ospin2-2, which exhibited curly phenotypes altered lateral formation patterns The OsPIN2 gene encodes a member of efflux carrier proteins that possibly regulates basipetal from tip toward zone....

10.1111/ppl.12707 article EN publisher-specific-oa Physiologia Plantarum 2018-02-15

Internal oxygen diffusion from shoot to root tips is enhanced by the formation of aerenchyma (gas space) in waterlogged soils. Lysigenous created programmed cell death and subsequent lysis cortical cells. Rice (Oryza sativa) forms constitutively under aerobic conditions increases its oxygen-deficient conditions. Recently, we have demonstrated that constitutive regulated auxin signaling mediated Auxin/indole-3-acetic acid protein (AUX/IAA; IAA). While ethylene involved inducible formation,...

10.3390/plants9050610 article EN cc-by Plants 2020-05-11

10.1016/j.tplants.2021.10.012 article EN publisher-specific-oa Trends in Plant Science 2021-11-20

To adapt to waterlogging, maize (Zea mays) forms lysigenous aerenchyma in root cortex as a result of ethylene-promoted programmed cell death (PCD). Respiratory burst oxidase homolog (RBOH) gene encodes gp91phox NADPH oxidase, and has role the generation reactive oxygen species (ROS). Recently, we found that, during formation, RBOH was up-regulated all tissues examined, whereas an ROS scavenging-related metallothionein (MT) down-regulated specifically cortical cells. Together, these changes...

10.4161/psb.6.5.15417 article EN Plant Signaling & Behavior 2011-05-01

Abstract The formation of a barrier to radial oxygen ( O 2 ) loss ROL in the root is an important adaptation plants flooding, but biochemical changes plant roots where formed are unclear. In this study, we analysed metabolic profiles and gene expression rice ryza sativa L .) grown under stagnant deoxygenated conditions, which induce suberization outer cell layers . Under these two distinctive features were accumulations malic acid very long chain fatty acids VLCFAs ). We also showed that...

10.1111/pce.12294 article EN Plant Cell & Environment 2014-02-10

Background and Aims Internal aeration is important for plants to survive during periods of waterlogging, the ability form aerenchyma contributes by creating a continuous gas space between shoots roots. Roots maize (Zea mays) react prolonged waterlogging forming in root cortical cells programmed cell death (PCD) response ethylene. The aim this study was understand molecular mechanisms ethylene-induced formation identifying genes that are either up- or downregulated ethylene treatment cells....

10.1093/aob/mcv018 article EN Annals of Botany 2015-04-08

Plants require water, but a deficit or excess of water can negatively impact their growth and functioning. Soil flooding, in which root-zone is filled with restricts oxygen diffusion into the soil. Global climate change increasing risk crop yield loss caused by development flooding tolerant crops urgently needed. Root anatomical traits are essential for plants to adapt drought as they determine balance between rates transport. The stele contains xylem cortex aerenchyma (gas spaces),...

10.1270/jsbbs.20119 article EN Breeding Science 2021-01-01

Summary Although homologous recombination‐promoted knock‐in targeting to monitor the expression of a gene by fusing reporter with its promoter is routine practice in mice, modify endogenous genes flowering plants remains infancy. In targeting, junction sequence between and an target can be designed properly, transgenic carrying identical desired allele repeatedly obtained. By employing reproducible gene‐targeting procedure positive–negative selection rice, we were able obtain fertile...

10.1111/j.1365-313x.2009.03947.x article EN The Plant Journal 2009-06-09
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