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Christophe Cupillard

ORCID: 0000-0002-8567-3540
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A5004107652
Research Areas
  • Pleistocene-Era Hominins and Archaeology
  • Archaeological and Geological Studies
  • Ancient and Medieval Archaeology Studies
  • Archaeology and ancient environmental studies
  • Forensic and Genetic Research
  • Geology and Paleoclimatology Research
  • Forensic Anthropology and Bioarchaeology Studies
  • Archaeological and Historical Studies
  • Ancient Mediterranean Archaeology and History
  • Genetic diversity and population structure
  • Isotope Analysis in Ecology
  • Salivary Gland Disorders and Functions
  • Cultural Insights and Digital Impacts
  • Wildlife Ecology and Conservation
  • Geological and Geophysical Studies Worldwide
  • Geotourism and Geoheritage Conservation
  • Race, Genetics, and Society
  • Oral microbiology and periodontitis research
  • Gut microbiota and health
  • Yersinia bacterium, plague, ectoparasites research
  • Geological Formations and Processes Exploration
  • Canadian Identity and History
  • Historical and Archaeological Studies
  • Health, Medicine and Society
  • Evolution and Paleontology Studies

Laboratoire Chrono-Environnement
 2013-2023

Centre National de la Recherche Scientifique
 1999-2021

 The genetic history of Ice Age Europe
OPENALEX - Publications 
Qiaomei Fu Cosimo Posth Mateja Hajdinjak Martin Petr Swapan Mallick and 59 more Daniel Fernandes Anja Furtwängler Wolfgang Haak Matthias Meyer Alissa Mittnik Birgit Nickel Alexander Peltzer Nadin Rohland Viviane Slon Sahra Talamo Iosif Lazaridis Mark Lipson Iain Mathieson Stephan Schiffels Pontus Skoglund А. П. Деревянко NIKOLAI I. DROZDOV V. S. Slavinsky Alexander Alekseevich Tsybankov Renata Grifoni Cremonesi Francesco Mallegni Bernard Gély E. Vacca Manuel R. González Morales Lawrence Guy Straus Christine Neugebauer-Maresch Maria Teschler‐Nicola Silviu Constantin Oana Teodora Moldovan Stefano Benazzi Marco Peresani Donato Coppola Martina Lari Stefano Ricci Annamaria Ronchitelli Frédérique Valentin Corinne Thévenet Kurt Wehrberger Dan Grigorescu Hélène Rougier Isabelle Crevecœur Damien Flas Patrick Semal Marcello A. Mannino Christophe Cupillard Hervé Bocherens Nicholas J. Conard Katerina Harvati Vyacheslav Moiseyev Dorothée G. Drucker Jiřı́ Svoboda Michael P. Richards David Caramelli Ron Pinhasi Janet Kelso Nick Patterson Johannes Krause Svante Pääbo David Reich

10.1038/nature17993 article EN Nature 2016-04-29
 The genomic history of southeastern Europe
OPENALEX - Publications 
Iain Mathieson Songül Alpaslan-Roodenberg Cosimo Posth Anna Szécsényi‐Nagy Nadin Rohland and 95 more Swapan Mallick Ïñigo Olalde Nasreen Broomandkhoshbacht Francesca Candilio Olivia Cheronet Daniel Fernandes Matthew Ferry Beatriz Gamarra Gloria G. Fortes Wolfgang Haak Éadaoin Harney Eppie R. Jones Denise Keating Ben Krause‐Kyora İşil Küçükkalıpçı Megan Michel Alissa Mittnik Kathrin Nägele Mario Novak Jonas Oppenheimer Nick Patterson Saskia Pfrengle Kendra Sirak Kristin Stewardson Stefania Vai Stefan Alexandrov Kurt W. Alt Radian Andreescu Dragana Antonović Abigail Ash Nadezhda Atanassova Krum Bacvarov Mende Balázs Gusztáv Hervé Bocherens Michael Bolus Adina Boroneanț Yavor Boyadzhiev Alicja Budnik Josip Burmaz Stefan Chohadzhiev Nicholas J. Conard Richard Cottiaux Maja Čuka Christophe Cupillard Dorothée G. Drucker Nedko Elenski Michael Francken Borislava Galabova Georgi Ganetsovski Bernard Gély Tamás Hajdu Veneta Handzhyiska Katerina Harvati Thomas Higham Stanislav Iliev Ivor Janković Ivor Karavanić Douglas J. Kennett Darko Komšo Олександра Козак Damian Labuda Martina Lari Cǎtǎlin Lazăr Maleen Leppek Krassimir Leshtakov Domenico Lo Vetro Dženi Los Ivaylo Lozanov Maria Malina Fabio Martini Kath McSweeney Harald Meller Marko Menđušić Pavel Mirea Vyacheslav Moiseyev Vanya Petrova T. Douglas Price Angela Simalcsik Luca Sìneo Mario Šlaus Vladimir Slavchev Petar Stanev Andrej Starović Tamás Szeniczey Sahra Talamo Maria Teschler‐Nicola Corinne Thévenet Ivan Valchev Frédérique Valentin Sergey Vasilyev Fanica Veljanovska Svetlana Venelinova Elizaveta Veselovskaya Bence Viola Cristian Virag

10.1038/nature25778 article EN Nature 2018-02-21
 Pleistocene Mitochondrial Genomes Suggest a Single Major Dispersal of Non-Africans and a Late Glacial Population Turnover in Europe
OPENALEX - Publications 
Cosimo Posth Gabriel Renaud Alissa Mittnik Dorothée G. Drucker Hélène Rougier and 30 more Christophe Cupillard Frédérique Valentin Corinne Thévenet Anja Furtwängler Christoph Wißing Michael Francken Maria Malina Michael Bolus Martina Lari Elena Gigli Giulia Capecchi Isabelle Crevecœur Cédric Beauval Damien Flas Mietje Germonpré J. van der Plicht Richard Cottiaux Bernard Gély Annamaria Ronchitelli Kurt Wehrberger Dan Grigorescu Jiřı́ Svoboda Patrick Semal David Caramelli Hervé Bocherens Katerina Harvati Nicholas J. Conard Wolfgang Haak Adam Powell Johannes Krause

10.1016/j.cub.2016.01.037 article EN publisher-specific-oa Current Biology 2016-02-04
 Palaeogenomics of Upper Palaeolithic to Neolithic European hunter-gatherers
OPENALEX - Publications 
Cosimo Posth Yu He Ayshin Ghalichi Hélène Rougier Isabelle Crevecœur and 95 more Yilei Huang Harald Ringbauer Adam B. Rohrlach Kathrin Nägele Vanessa Villalba‐Mouco Rita Radzevičiūtė Tiago Ferraz Alexander Stoessel Rezeda I. Tukhbatova Dorothée G. Drucker Martina Lari Alessandra Modi Stefania Vai Tina Saupe Christiana L. Scheib Giulio Catalano Luca Pagani Sahra Talamo Helen Fewlass Laurent Klaric André Morala Mathieu Rué Stéphane Madelaine Laurent Crépin Jean-Baptiste Caverne Emmy Bocaege Stefano Ricci Francesco Boschin Priscilla Bayle Bruno Maureille Foni Le Brun‐Ricalens Jean‐Guillaume Bordes Gregorio Oxilia Eugenio Bortolini Olivier Bignon‐Lau Grégory Debout Michel Orliac Antoine Zazzo Vitale Sparacello Elisabetta Starnini Luca Sìneo J. van der Plicht Laure Pecqueur Gildas Merceron Géraldine Garcia Jean-Michel Leuvrey Coralie Bay Garcia Asier Gómez‐Olivencia Marta Połtowicz-Bobak Dariusz Bobak Mona Le Luyer Paul Storm Claudia Hoffmann Jacek Kabaciński Т. В. Филимонова Светлана Шнайдер Natalia Berezina Borja González-Rabanal Manuel R. González Morales Ana B. Marín‐Arroyo Belén López Carmen Alonso‐Llamazares Annamaria Ronchitelli Caroline Polet Ivan Jadin Nicolas Cauwe Joaquim Soler Massana Neus Coromina Isaac Rufí Richard Cottiaux Geoffrey A. Clark Lawrence Guy Straus Marie-Anne Julien Silvia Renhart Dorothea Talaa Stefano Benazzi Matteo Romandini Luc Amkreutz Hervé Bocherens Christoph Wißing Sébastien Villotte Javier Fernández‐López de Pablo Magdalena Gómez-Puche Marco Aurelio Esquembre-Bebia Pierre Bodu Liesbeth Smits Bénédicte Souffi Rimantas Jankauskas Justina Kozakaitė Christophe Cupillard Hartmut Benthien Kurt Wehrberger Ralf W. Schmitz Susanne C. Feine Tim Schüler

Modern humans have populated Europe for more than 45,000 years

10.1038/s41586-023-05726-0 article EN cc-by Nature 2023-03-01
 The evolution and changing ecology of the African hominid oral microbiome
OPENALEX - Publications 
James A. Fellows Yates Irina M. Velsko Franziska Aron Cosimo Posth Courtney A. Hofman and 44 more Rita M. Austin Cody Parker Allison E. Mann Kathrin Nägele Kathryn Weedman Arthur John Arthur Catherine Bauer Isabelle Crevecœur Christophe Cupillard Matthew C. Curtis Love Dalén Marta Díaz‐Zorita Bonilla Juan Carlos Díez Fernández-Lomana Dorothée G. Drucker Elena Escribano Escrivá Michael Francken Victoria E. Gibbon Manuel R. González Morales Ana Grande Mateu Katerina Harvati Amanda G. Henry Louise Humphrey Mario Menéndez Dušan Mihailović Marco Peresani Sofía Rodríguez Moroder Mirjana Roksandić Hélène Rougier Sandra Sázelová Jay T. Stock Lawrence Guy Straus Jiřı́ Svoboda Barbara Teßmann Michael J. Walker Robert C. Power Cecil M. Lewis Krithivasan Sankaranarayanan Katerina Guschanski Richard W. Wrangham Floyd E. Dewhirst Domingo C. Salazar‐García Johannes Krause Alexander Herbig Christina Warinner

Significance The microbiome plays key roles in human health, but little is known about its evolution. We investigate the evolutionary history of African hominid oral by analyzing dental biofilms humans and Neanderthals spanning past 100,000 years comparing them with those chimpanzees, gorillas, howler monkeys. identify 10 core bacterial genera that have been maintained within lineage play biofilm structural roles. However, many remain understudied unnamed. find major taxonomic functional...

10.1073/pnas.2021655118 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2021-05-10
 Isotopic evidence for dietary ecology of cave lion (Panthera spelaea) in North-Western Europe: Prey choice, competition and implications for extinction
OPENALEX - Publications 
Hervé Bocherens Dorothée G. Drucker Dominique Bonjean Anne Bridault Nicholas J. Conard and 9 more Christophe Cupillard Mietje Germonpré Markus Höneisen Susanne C. Münzel Hannes Napierala Marylène Patou‐Mathis Elisabeth Stephan Hans‐Peter Uerpmann Reinhard Ziegler

10.1016/j.quaint.2011.02.023 article EN Quaternary International 2011-03-16
 Evolution of habitat and environment of red deer (Cervus elaphus) during the Late-glacial and early Holocene in eastern France (French Jura and the western Alps) using multi-isotope analysis (δ13C, δ15N, δ18O, δ34S) of archaeological remains
OPENALEX - Publications 
Dorothée G. Drucker Anne Bridault Christophe Cupillard Alisa Hujic Hervé Bocherens

10.1016/j.quaint.2011.07.019 article EN Quaternary International 2011-07-24
 Large-scale mitogenomic analysis of the phylogeography of the Late Pleistocene cave bear
OPENALEX - Publications 
Joscha Gretzinger Martyna Molak Ella Reiter Saskia Pfrengle Christian Urban and 19 more Judith Neukamm Michel Blant Nicholas J. Conard Christophe Cupillard Vesna Dimitrijević Dorothée G. Drucker Emilia Hofman‐Kamińska Rafał Kowalczyk Maciej T. Krajcarz Magdalena Krajcarz Susanne C. Münzel Marco Peresani Matteo Romandini Isaac Rufí Joaquim Soler Massana Gabriele Terlato Johannes Krause Hervé Bocherens Verena J. Schuenemann

The cave bear (Ursus spelaeus) is one of the Late Pleistocene megafauna species that faced extinction at end last ice age. Although it represented by largest fossil records in Europe and has been subject to several interdisciplinary studies including palaeogenetic research, its fate remains highly controversial. Here, we used a combination hybridisation capture next generation sequencing reconstruct 59 new complete mitochondrial genomes (mtDNA) from 14 sites Western, Central Eastern Europe....

10.1038/s41598-019-47073-z article EN cc-by Scientific Reports 2019-08-15
 The Genomic History Of Southeastern Europe
OPENALEX - Publications 
Iain Mathieson Songül Alpaslan Roodenberg Cosimo Posth Anna Szécsényi‐Nagy Nadin Rohland and 95 more Swapan Mallick Ïñigo Olalde Nasreen Broomandkhoshbacht Francesca Candilio Olivia Cheronet Daniel Fernandes Matthew Ferry Beatriz Gamarra Gloria G. Fortes Wolfgang Haak Éadaoin Harney Eppie R. Jones Denise Keating Ben Krause‐Kyora İşil Küçükkalıpçı Megan Michel Alissa Mittnik Kathrin Nägele Mario Novak Jonas Oppenheimer Nick Patterson Saskia Pfrengle Kendra Sirak Kristin Stewardson Stefania Vai Stefan Alexandrov Kurt W. Alt Radian Andreescu Dragana Antonović Abigail Ash Nadezhda Atanassova Krum Bacvarov Mende Balázs Gusztáv Hervé Bocherens Michael Bolus Adina Boroneanț Yavor Boyadzhiev Alicja Budnik Josip Burmaz Stefan Chohadzhiev Nicholas J. Conard Richard Cottiaux Maja Čuka Christophe Cupillard Dorothée G. Drucker Nedko Elenski Michael Francken Borislava Galabova Georgi Ganetovski Bernard Gély Tamás Hajdu Veneta Handzhyiska Katerina Harvati Thomas Higham Stanislav Iliev Ivor Janković Ivor Karavanić Douglas J. Kennett Darko Komšo Alexandra Kozak Damian Labuda Martina Lari Cǎtǎlin Lazăr Maleen Leppek Krassimir Leshtakov Domenico Lo Vetro Dženi Los Ivaylo Lozanov Maria Malina Fabio Martini Kath McSweeney Harald Meller Marko Menđušić Pavel Mirea Vyacheslav Moiseyev Vanya Petrova T. Douglas Price Angela Simalcsik Luca Sìneo Mario Šlaus Vladimir Slavchev Petar Stanev Andrej Starović Tamás Szeniczey Sahra Talamo Maria Teschler‐Nicola Corinne Thévenet Ivan Valchev Frédérique Valentin Sergey Vasilyev Fanica Veljanovska Svetlana Venelinova Elizaveta Veselovskaya Bence Viola Cristian Virag

Abstract Farming was first introduced to southeastern Europe in the mid-7 th millennium BCE – brought by migrants from Anatolia who settled region before spreading throughout Europe. To clarify dynamics of interaction between farmers and indigenous hunter-gatherers where they met, we analyze genome-wide ancient DNA data 223 individuals lived surrounding regions 12,000 500 BCE. We document previously uncharacterized genetic structure, showing a West-East cline ancestry hunter-gatherers, show...

10.1101/135616 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2017-05-09
 Pleistocene Mitochondrial Genomes Suggest a Single Major Dispersal of Non-Africans and a Late Glacial Population Turnover in Europe
OPENALEX - Publications 
Cosimo Posth Gabriel Renaud Alissa Mittnik Dorothée G. Drucker Hélène Rougier and 30 more Christophe Cupillard Frédérique Valentin Corinne Thévenet Anja Furtwängler Christoph Wißing Michael Francken Maria Malina Michael Bolus Martina Lari Elena Gigli Giulia Capecchi Isabelle Crevecœur Cédric Beauval Damien Flas Mietje Germonpré J. van der Plicht Richard Cottiaux Bernard Gély Annamaria Ronchitelli K Wehrberger Dan Grigorescu Jiřı́ Svoboda Patrick Semal David Caramelli Hervé Bocherens Katerina Harvati Nicholas J. Conard Wolfgang Haak Adam C. Powell Johannes Krause

10.1016/j.cub.2016.02.022 article EN publisher-specific-oa Current Biology 2016-02-01
 Environmental context of the Magdalenian settlement in the Jura Mountains using stable isotope tracking (13C, 15N, 34S) of bone collagen from reindeer (Rangifer tarandus)
OPENALEX - Publications 
Dorothée G. Drucker Anne Bridault Christophe Cupillard

10.1016/j.quaint.2012.05.040 article EN Quaternary International 2012-06-01
 Changes in ecosystems, climate and societies in the Jura Mountains between 40 and 8 ka cal BP
OPENALEX - Publications 
Christophe Cupillard Michel Magny Hervé Bocherens Anne Bridault Carole Bégeot and 10 more Vincent Bichet Gilles Bossuet Dorothée G. Drucker Émilie Gauthier Gwennolé Jouannic Laurent Millet Hervé Richard Damien Rius Pascale Ruffaldi Anne‐Véronique Walter‐Simonnet

10.1016/j.quaint.2014.05.032 article EN Quaternary International 2014-07-04
 Le Magdalénien de la grotte « Grappin » à Arlay (Jura, France) : nouveaux regards
OPENALEX - Publications 
Christophe Cupillard Anne-Catherine Welté

10.1016/j.anthro.2006.07.011 article FR L Anthropologie 2006-10-01
 Wild boar (Sus scrofa scrofa) hunting and exploitation strategies during the Mesolithic at Les Cabônes (Ranchot Jura, France), layer 3
OPENALEX - Publications 
Charlotte Leduc Anne Bridault Christophe Cupillard

10.1016/j.jasrep.2015.05.010 article EN Journal of Archaeological Science Reports 2015-05-15
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