Sukrit Gupta

ORCID: 0000-0002-8974-8482
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Functional Brain Connectivity Studies
  • Neural dynamics and brain function
  • EEG and Brain-Computer Interfaces
  • Advanced MRI Techniques and Applications
  • Radiomics and Machine Learning in Medical Imaging
  • Complex Network Analysis Techniques
  • Medical Image Segmentation Techniques
  • AI in cancer detection
  • Advanced Graph Neural Networks
  • Brain Tumor Detection and Classification
  • Bioinformatics and Genomic Networks
  • COVID-19 diagnosis using AI
  • Advanced Proteomics Techniques and Applications
  • Hematological disorders and diagnostics
  • Mass Spectrometry Techniques and Applications
  • Digital Imaging for Blood Diseases
  • Advanced Neuroimaging Techniques and Applications
  • Neuroscience and Neural Engineering
  • Intracerebral and Subarachnoid Hemorrhage Research
  • Time Series Analysis and Forecasting
  • Context-Aware Activity Recognition Systems
  • Advanced Image and Video Retrieval Techniques
  • Metabolomics and Mass Spectrometry Studies
  • Computational Drug Discovery Methods
  • Machine Learning in Bioinformatics

Indian Institute of Technology Ropar
2024

Nanyang Technological University
2017-2024

Hasso Plattner Institute
2024

University of Potsdam
2024

Indian Institute of Technology Indore
2024

Vellore Institute of Technology University
2016

Ben-Gurion University of the Negev
2016

Punjab Engineering College
2015

Decoding human activity accurately from wearable sensors can aid in applications related to healthcare and context awareness. The present approaches this domain use recurrent and/or convolutional models capture the spatio-temporal features time-series data multiple sensors. We propose a deep neural network architecture that not only captures of sensor but also selects, learns important time points by utilizing self-attention mechanism. show validity proposed approach across different...

10.1109/jsen.2020.3045135 article EN IEEE Sensors Journal 2020-12-17

Successive layers in convolutional neural networks (CNN) extract different features from input images. Applications of CNNs to detect abnormalities the 2D images or 3D volumes body organs have recently become popular. However, computer-aided detection diseases using deep CNN is challenging due absence a large set training medical images/scans and relatively small hard abnormalities. In this paper, we propose method for normalizing volumetric scans intensity profile samples. This aids by...

10.1109/jsen.2020.3023471 article EN IEEE Sensors Journal 2020-09-11

Betweenness centrality is widely used as a measure, with applications across several disciplines. It measure that quantifies the importance of vertex based on vertex's occurrence shortest paths in graph. This global and order to find betweenness node, one supposed have complete information about Most algorithms are assume constancy graph not efficient for _dynamic networks_. We propose technique update when nodes added or deleted. Observed experimentally, real graphs, our algorithm speeds up...

10.1080/15427951.2014.982311 article EN Internet Mathematics 2015-01-26

Specialized processing in the brain is performed by multiple groups of regions organized as functional modules. Although, vivo studies modules involve Magnetic Resonance Imaging (fMRI) scans, methods used to derive from networks ignore individual differences architecture and use incomplete connectivity information. To correct this, we propose an Iterative Consensus Spectral Clustering (ICSC) algorithm that detects most representative dense weighted matrices derived scans. The ICSC derives...

10.1038/s41598-020-63552-0 article EN cc-by Scientific Reports 2020-05-05

In this paper, a brief overview of real time implementation next generation Robust, Tracking, Disturbance rejecting, Aggressive (RTDA) controller and Model Predictive Control (MPC) is provided. The control algorithm implemented through MATLAB. plant model used in design obtained using system identification tool integral response method. developed Simulink jMPC tool, which will be executed time. outputs are tested for various constraint values to obtain the desirable results. Hardware Loop...

10.1016/j.aej.2016.07.028 article EN cc-by-nc-nd Alexandria Engineering Journal 2016-08-24

Functional modules in the human brain support its drive for specialization whereas hubs act as focal points information integration. Brain are regions that have a large number of both within and between module connections. We argue weak connections functional networks lead to misclassification hubs. In order resolve this, we propose new measure called ambivert degree considers node’s well connection weights identify nodes with high Using resting-state MRI scans from Human Connectome Project,...

10.1016/j.nicl.2020.102186 article EN cc-by-nc-nd NeuroImage Clinical 2020-01-01

Heterogeneity is present in Alzheimer's disease (AD), making it challenging to study. To address this, we propose a graph neural network (GNN) approach identify subtypes from magnetic resonance imaging (MRI) and functional MRI (fMRI) scans. Subtypes are identified by encoding the patients' scans brain graphs (via cortical similarity networks) clustering representations learnt GNN. These subtyping information used construct population for an ensemble of local networks, each producing...

10.1109/icassp48485.2024.10447054 article EN ICASSP 2022 - 2022 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) 2024-03-18

Abstract Functional magnetic resonance imaging (fMRI) is used to capture complex and dynamic interactions between brain regions while performing tasks. Task related alterations in the have been classified as task specific general, depending on whether they are particular a or common across multiple Using recent attempts interpreting deep learning models, we propose an approach determine both general architectures of functional brain. We demonstrate our methods with reference‐based decoder...

10.1002/hbm.25817 article EN cc-by-nc Human Brain Mapping 2022-02-27

Functional connectivity of the human brain and hierarchical modular architecture functional networks can be investigated using magnetic resonance imaging (fMRI). Various network models, such as power-law have been explored before to study networks. In order investigate plausibility modeling with models based on distribution node degree connection weights, we will compute goodness-of-fit several resting-state fMRI scans gathered in Human Connectome Project. Our experiments suggest that...

10.1109/isbi.2017.7950573 article EN 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI) 2017-04-01

Abstract Deep neural networks have been demonstrated to extract high level features from neuroimaging data when classifying brain states. Identifying salient characterizing states further refines the focus of clinicians and allows design better diagnostic systems. We demonstrate this while performing classification resting-state functional magnetic resonance imaging (fMRI) scans patients suffering Alzheimer’s Disease (AD) Mild Cognitive Impairment (MCI), Cognitively Normal (CN) subjects...

10.1101/697003 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2019-07-12

<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">Objective:</i> Brain state classification by applying deep learning techniques on neuroimaging data has become a recent topic of research. However, unlike domains where the is low dimensional or there are large number available training samples, high and few samples. To tackle these issues, we present sparse feedforward neural architecture for encoding decoding structural connectome human brain....

10.1109/jtehm.2024.3366504 article EN cc-by-nc-nd IEEE Journal of Translational Engineering in Health and Medicine 2024-01-01

Motivation: Accurate quantitative information about the protein abundance is crucial for understanding a biological system and its dynamics. Protein commonly estimated using label-free, bottom-up mass spectrometry protocols. Here, proteins are digested into peptides before quantification via spectrometry. However, missing peptide values, which can make up more than 50% of all common issue. They result in then hinder accurate reliable downstream analyses. Results: To impute we propose...

10.1101/2024.03.23.586248 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-03-25

Accurate quantitative information about protein abundance is crucial for understanding a biological system and its dynamics. Protein commonly estimated using label-free, bottom-up mass spectrometry (MS) protocols. Here, proteins are digested into peptides before quantification via MS. However, missing peptide values, which can make up more than 50% of all common issue. They result in then hinder accurate reliable downstream analyses.

10.1093/bioinformatics/btae389 article EN cc-by Bioinformatics 2024-09-01

Bone marrow examination has become increasingly important for the diagnosis and treatment of hematologic other illnesses. The present methods analyzing bone biopsy samples involve subjective inaccurate assessments by visual estimation pathologists. Thus, there is a need to develop automated tools assist in analysis samples. However, lack publicly available standardized high-quality datasets that can aid research development provide consistent objective measurements. In this paper, we...

10.1101/2024.10.02.616393 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2024-10-03

Bone marrow reticulin fibrosis is associated with varied benign as well malignant hematological conditions. The assessment of important in the diagnosis, prognostication and management such disorders. current methods for quantification are inefficient prone to errors. Therefore, there a need automated tools accurate consistent reticulin. However, lack standardized datasets has hindered development tools. In this study, we present comprehensive dataset that comprises 201 Marrow Biopsy images...

10.1101/2024.10.02.616389 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2024-10-03

10.1109/bhi62660.2024.10913640 article EN IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI ...) 2024-11-10

Resting-state brain functional networks (BFNs) give information about spatio-temporal interactions in the when subject is at rest or not performing any task. Investigations with resting-state Magnetic Resonance Imaging (rs-fMRI) data have shown that BFN possesses a modular architecture. However, nodal degree distributions within modules of BFN, over large population subjects, thus far been investigated. The aim this work to assign memberships regions and study modules. We fit different...

10.1109/isbi.2018.8363799 article EN 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI) 2018-04-01

Abstract Neuroscientific knowledge points to the presence of redundancy in correlations brain’s functional activity. These redundancies can be removed mitigate problem overfitting when deep neural network (DNN) models are used classify neuroimaging datasets. We propose an algorithm that removes insignificant nodes DNNs a layerwise manner and then adds subset correlated features single shot. When performing experiments with MRI datasets for classifying patients from healthy controls, we were...

10.1101/2020.04.22.056382 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-04-24
Coming Soon ...