Shunsaku Kimura

ORCID: 0000-0003-0777-9697
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About
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Research Areas
  • Supramolecular Self-Assembly in Materials
  • Chemical Synthesis and Analysis
  • Molecular Junctions and Nanostructures
  • Lipid Membrane Structure and Behavior
  • Advanced biosensing and bioanalysis techniques
  • Polydiacetylene-based materials and applications
  • Glycosylation and Glycoproteins Research
  • Carbohydrate Chemistry and Synthesis
  • Photochromic and Fluorescence Chemistry
  • Nanoparticle-Based Drug Delivery
  • Surface Chemistry and Catalysis
  • biodegradable polymer synthesis and properties
  • RNA Interference and Gene Delivery
  • Neuropeptides and Animal Physiology
  • Advanced Polymer Synthesis and Characterization
  • DNA and Nucleic Acid Chemistry
  • Enzyme Production and Characterization
  • Antimicrobial Peptides and Activities
  • Porphyrin and Phthalocyanine Chemistry
  • Advanced Drug Delivery Systems
  • Photoreceptor and optogenetics research
  • Molecular Sensors and Ion Detection
  • Polymer Surface Interaction Studies
  • Nanoplatforms for cancer theranostics
  • Radiopharmaceutical Chemistry and Applications

Kyoto University
2014-2023

Kyoto Katsura Hospital
2010-2023

Tohoku University Hospital
2022

Graduate School USA
2014-2020

Kyoto University Hospital
2012-2013

European Synchrotron Radiation Facility
2010

Heidelberg University
2010

SPring-8
2008

Research Institute for Sustainable Humanosphere
2006

Niigata University
2000

We prepared a molecular photodiode system in which the photocurrent direction can be switched by choosing wavelength of an irradiating light. The is composed two types helical peptides that carry different chromophores and have directions dipole moments when they are immobilized on gold. mixed, self-assembled monolayer generated anodic one was photoexcited, whereas to being cathodic other chromophore photoexcited. opposite current response arises from moment each peptide, accelerates...

10.1126/science.1098489 article EN Science 2004-06-24

Well-ordered self-assembled monolayers (SAMs) were prepared on gold from helical peptides carrying a ferrocene (Fc) moiety at the N- or C-terminal end, and long-range electron transfer (ET) Fc to was investigated. Electrochemical studies revealed that an inelastic hopping mechanism dominated over superexchange in ET reactions present SAMs dipole moment of helix accelerated probably due lowering barrier height between surface peptide layer.

10.1021/ja034872n article EN Journal of the American Chemical Society 2003-06-26

Nonionic amphiphilic copolypeptides, which were composed of hydrophilic poly(sarcosine) and hydrophobic poly(gamma-methyl L-glutamate) blocks, synthesized with varying chain lengths the blocks. The polypeptides having a suitable balance found to form vesicular assemblies 100 nm size in buffer, was evidenced by TEM observation, DLS analysis, encapsulation experiment. genuine peptide vesicles, peptosomes, labeled near-infrared fluorescence (NIRF) probe. In vivo retention blood experiment...

10.1021/bc7001665 article EN Bioconjugate Chemistry 2007-12-29

Take the stepping stones: Electrons are exchanged between both termini of α-helical peptide self-assembled monolayers (SAMs) on gold by a hopping mechanism with amide groups as sites (see picture). The rate constant 0.45 s−1 for 64-mer is significantly high electron transfer through dielectric organic materials. Detailed facts importance to specialist readers published "Supporting Information". Such documents peer-reviewed, but not copy-edited or typeset. They made available submitted...

10.1002/anie.200905621 article EN Angewandte Chemie International Edition 2010-02-12

Self-assembled monolayers (SAMs) of α-helical peptides carrying an N-ethylcarbazolyl (ECz) group were prepared. The helical peptide SAMs on a gold surface characterized by quartz crystal microbalance measurements, cyclic voltammetry, and impedance spectroscopy, showing that tridecapeptide SAM with the N-terminal binding to was packed more densely than C-terminal binding. helix tilt angles from normal in these found be about 40° basis Fourier transform infrared reflection−absorption...

10.1021/ja992769l article EN Journal of the American Chemical Society 2000-03-01

Several hydrophobic α-helical peptides containing a disulfide group were synthesized, and the formation of oriented self-assembled monolayers (SAMs) on gold surface was investigated. The orientation helices in SAMs determined by Fourier transform infrared reflection−absorption spectroscopy measurements. tilt angle helix axis from normal sensitively affected choice solvent used preparation SAMs, nature component amino acids, molecular structure (either one-helix or two-helix peptide), length...

10.1021/la981296d article EN Langmuir 1998-10-30

Self-assembled monolayers of α-helical peptides were prepared on gold, and the effects monolayer structures (kind constituent amino acid, molecular orientation, packing) long-range electron transfer through helical studied. The 16mer having a thiophenyl linker at N-terminal for immobilization gold redox active ferrocene moiety C-terminal as an electron-transfer probe. immobilized by gold−sulfur linkage from to was studied electrochemical methods. When two types peptides, one with repeating...

10.1021/jp805711v article EN The Journal of Physical Chemistry B 2008-09-13

Amid-Trittsteine: Zwischen den Enden α-helicaler Peptide, die sich in selbstorganisierten Monoschichten (SAMs) auf einer Goldoberfläche befinden, findet ein Elektronenaustausch statt, wobei Amidgruppen als Zentren für Hüpfvorgang fungieren (siehe Bild). Die Geschwindigkeitskonstante von 0.45 s−1 das 64-mere Peptid ist ungewöhnlich hoch einen Elektronentransfer durch organisches Dielektrikum. Detailed facts of importance to specialist readers are published as ”Supporting Information”. Such...

10.1002/ange.200905621 article EN Angewandte Chemie 2010-02-12

Two types of peptide nanotubes, one is prepared from an amphiphilic having a right-handed helix segment and the other that left-handed segment, are shown to transform morphology into vesicle by membrane fusion due stereo-complex formation between these helical segments.

10.1039/c0cc04209a article EN Chemical Communications 2011-01-01

Nanoparticles are expected to be applicable for the theranostics as a carrier of diagnostic and therapeutic agents. Lactosome is polymeric micelle composed amphiphilic polydepsipeptide, poly(sarcosine) 64 ‐ block ‐poly( l ‐lactic acid) 30 , which was found accumulate in solid tumors through enhanced permeability retention effect. However, lactosome captured by liver on second administration mouse. This phenomenon called accelerated blood clearance phenomenon. On other hand, peptide‐nanosheet...

10.1002/psc.2655 article EN Journal of Peptide Science 2014-05-27

The in-depth structural analysis of spherulites artificial cellulose, formed by the enzymatic polymerization cellobiosyl fluoride, is reported. Both positive- and negative-type were observed polarization optical microscopy. Scanning electron microscopy revealed that negative have a three-dimensional round shape, where platelike single crystals cellulose originate radially from center. Transmission confirmed chains orient vertically in crystals, explaining observation Cellulose can be easily...

10.1021/bm990010w article EN Biomacromolecules 2000-03-09

Abstract An apolar synthetic octapeptide, Boc‐(Ala‐Aib) 4 ‐OMe, was crystallized in the triclinic space group P1 with cell dimensions a = 11.558 Å, b 11.643 c 9.650 α 120.220°, β 107.000°, γ 90.430°, V 1055.889 Å 3 , Z 1, C 34 H 60 O 11 N 8 ·H 2 O. The calculated crystal density 1.217 g/cm and absorption coefficient ϕ 6.1. All intrahelical hydrogen bonds are of 10 type, but torsion angles, ψ, Ala(5) Ala(7) deviate from standard values. distortion ‐helix at C‐terminal half is due to...

10.1002/bip.360330904 article EN Biopolymers 1993-09-01

A novel molecular system, where the photocurrent direction can be reversibly switched by changing pH of solution, was prepared on gold from helical peptides carrying a photosensitizer and carboxyl group at terminal. Upon photoexcitation in an aqueous solution containing electron donor acceptor 10, monolayer generated anodic due to enhancement dipole moment carboxylate anion, while it opposite cathodic 3.4

10.1021/ja055624p article EN Journal of the American Chemical Society 2005-10-01

Octadecapeptides carrying a ferrocene moiety at the molecular terminal were self-assembled on gold, and long-range electron transfer from to gold was investigated by electrochemical methods. Effects of dipole moment helical peptides, linkers connecting peptide chromophores introduced into side chains discussed. Cyclic voltammetry monolayers in an aqueous solution revealed that over 40 Å occurred along molecule. Chronoamperometry showed should be ascribed hopping mechanism with use amide...

10.1021/jp051592g article EN The Journal of Physical Chemistry B 2005-07-08

Abstract Helical peptides of 8mer, 16mer, and 24mer carrying a disulfide group at the N ‐terminal ferrocene moiety C were synthesized, they self‐assembled on gold by sulfur–gold linkage. Infrared reflection–absorption spectroscopy ellipsometry confirmed that formed monolayer with upright orientation. Cyclic voltammetry showed electron transfer from to occurred even longest peptide. Chronoamperometry electrochemical impedance carried out determine standard rate constants. It was found...

10.1002/psc.974 article EN Journal of Peptide Science 2007-11-26

Amphiphilic block polypeptides having a helical hydrophobic with uniform chain length and hydrophilic nonionic were newly synthesized self-assembled into homogeneous nanotubes ca. 60 nm diameter 200 length. The tubular assembly was shown to be elongated by heating over micrometer without changing the diameter. Notably, distinctive three-way nanotube obtained just mixing two kinds of amphiphilic same but different lengths block. morphology molecular assemblies tunable from curved sheet-shaped...

10.1002/mabi.200800071 article EN Macromolecular Bioscience 2008-07-05

The assembly of molecular architectures on the basis dipoles is proposed here to be a promising tool for construction nanomaterials and nanodevices. Three kinds building blocks having are discussed; helical peptides, cyclic β-peptides, oligo(phenylene ethynylene)s donor acceptor substituents. Secondary interactions involving shown effective control precise shapes assemble in regular manner. Furthermore, can generate strong electric field at nanoscale, which useful promotion or suppression...

10.1039/b717898k article EN Organic & Biomolecular Chemistry 2008-01-01

pH-Responsive molecular assemblies with a variation in morphology ranging from twisted ribbon, helical to nanotube were prepared novel A3B-type amphiphilic peptide having three hydrophilic poly(sarcosine) (A block) chains, hydrophobic dodecapeptide (B block), and two histidine (His) residues between the A3 B blocks. The adopted morphologies of ribbon at pH 3.0, 5.0, 7.4, depending upon protonation states His residues. On other hand, another one residue blocks showed change only relatively...

10.1021/la404784e article EN Langmuir 2014-01-11
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