- Plant Molecular Biology Research
- Plant and animal studies
- Plant Reproductive Biology
- Animal Behavior and Reproduction
- Plant Stress Responses and Tolerance
- Plant and Fungal Interactions Research
- Amphibian and Reptile Biology
- Cardiomyopathy and Myosin Studies
- Chromosomal and Genetic Variations
- Insect and Arachnid Ecology and Behavior
- Plant-Microbe Interactions and Immunity
- Insect Resistance and Genetics
- Insect symbiosis and bacterial influences
- Plant Physiology and Cultivation Studies
- Plant Pathogens and Fungal Diseases
- Fern and Epiphyte Biology
- Plant Gene Expression Analysis
- Genomics and Phylogenetic Studies
- Bioenergy crop production and management
- Seed Germination and Physiology
- Agricultural pest management studies
- Cellular Mechanics and Interactions
- Forest Ecology and Biodiversity Studies
- Plant Parasitism and Resistance
- Evolution and Genetic Dynamics
University of California, Davis
2019-2023
University of California, Berkeley
2023
Plant Gene Expression Center
2023
University of Pennsylvania
2014-2021
University of North Carolina at Chapel Hill
2009-2012
Google (United States)
2009
Abstract Population genomic analyses have demonstrated power to address major questions in evolutionary and molecular microbiology. Collecting populations of genomes is hindered many microbial species by the absence a cost effective practical method collect ample quantities sufficiently pure DNA for next-generation sequencing. Here we present simple amplify target complex, natural sample. The selective whole genome amplification (SWGA) technique amplifies using nucleotide sequence motifs...
ABSTRACT Vegetative phase change in Arabidopsis thaliana is mediated by a decrease the level of MIR156A and MIR156C, resulting an increase expression their targets, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes. Changes chromatin structure are required for downregulation but whether contributes to initial elevated unknown. We found that mutations components SWR1 complex (ARP6, SEF) genes encoding H2A.Z (HTA9 HTA11) reduce accelerate vegetative change, indicating promotes juvenile...
Age-dependent changes in plant defense against herbivores are widespread, but why these exist remains a mystery. We explored this question by examining suite of traits required for the interaction between swollen thorn acacias (genus Vachellia ) and ants genus Pseudomyrmex . In system, plants provide with refuge food form stipular spines, protein-lipid–rich “Beltian” bodies, sugar-secreting extrafloral nectaries—the “swollen syndrome.” show that syndrome develops at predictable time shoot...
Summary Plants transition through juvenile and adult phases of vegetative development in a process known as phase change (VPC). In poplars (genus Populus ) the differences between these stages are subtle, making it difficult to determine when this occurs. Previous studies VPC have relied on plants propagated vitro , leaving natural progression unknown. We examined developmental morphology seed‐grown derived tremula × alba (clone 717‐1B4), compared phenotype transgenics with manipulated...
Phenotypic plasticity--the capacity of a single genotype to produce different phenotypes in response varying environmental conditions--is widespread. Yet, whether, and how, plasticity impacts evolutionary diversification is unclear. According widely discussed hypothesis, promotes rapid evolution because genes expressed differentially across environments (i.e., with "biased" expression) experience relaxed genetic constraint thereby accumulate variation faster than do unbiased expression....
Ecological character displacement—trait evolution stemming from selection to lessen resource competition between species—is most often inferred a pattern in which species differ resource-use traits sympatry but not allopatry, and sympatric populations within each conspecific allopatric populations. Yet, without information on population history, the presence of divergent phenotype multiple does necessarily imply that there has been repeated displacement. Instead, such may arise if...
The genus Acacia is a large group of woody legumes containing an enormous amount morphological diversity in leaf shape. This at least part the result innovation development where many species are capable developing leaves both bifacial and unifacial morphologies. While not unique plant kingdom, unifaciality most commonly associated with monocots, its developmental genetic mechanisms have yet to be explored beyond this group. In study, we identify accession crassicarpa high regeneration rates...
Clonally propagated crops have long been recognized for their high levels of heterozygosity both between subgenomes within a somatic cell and cells an individual clone. Recent developments in read sequencing technologies accelerated our ability to identify this diversity it is increasingly clear that these sources are abundant clonal varieties can contribute variation traits interest breeders. In work, we assemble Mexican lime ( Citrus x aurantifolia ), interspecific hybrid C. hystrix var....
Summary Plants transition through juvenile and adult phases of vegetative development in a process known as phase change (VPC). In poplars (genus Populus ) the differences between these stages are subtle, making it difficult to determine when this occurs. Previous studies VPC have relied on plants propagated vitro , leaving natural progression unknown. We examined developmental morphology seed-grown derived tremula x alba (clone 717-1B4), compared phenotype these, transgenics with...