A5103080095- Plant-Microbe Interactions and Immunity
- Plant Pathogenic Bacteria Studies
- Sugarcane Cultivation and Processing
- Plant Stress Responses and Tolerance
- Plant Gene Expression Analysis
- Cocoa and Sweet Potato Agronomy
- Biofuel production and bioconversion
- Plant responses to water stress
- Coffee research and impacts
- Nanoparticles: synthesis and applications
- Genomics and Phylogenetic Studies
- Rice Cultivation and Yield Improvement
- Irrigation Practices and Water Management
- Metabolomics and Mass Spectrometry Studies
Fujian Agriculture and Forestry University
2019-2024
Sugarcane (Saccharum spp. hybrid) is frequently affected by seasonal drought, which causes substantial declines in quality and yield. To understand the drought resistance mechanisms of S. officinarum, main species modern sugarcane, at a molecular level, we carried out comparative analysis transcriptome metabolome profiling sugarcane variety Badila under stress (DS). Compared with control group (CG) plants, plants exposed to DS had 13,744 (6663 up-regulated 7081 down-regulated) differentially...
To systematically analyze mitogen‐activated protein (MAP) kinase gene families and their expression profiles in sugarcane ( Saccharum spp. hybrids; Sh) under diverse biotic abiotic stresses, we identified 15 ShMAPKs , 6 ShMAPKKs 16 ShMAPKKKs genes the cultivar R570 genome. These were also confirmed one S. spontaneum genome two transcriptome datasets of trigged by Acidovorax avenae subsp . Aaa ) Xanthomonas albilineans Xa infections. Phylogenetic analysis revealed that four subgroups present...
Rice (Oryza sativa) is one of the most important food crops around world, which sensitive to salt stress, especially in seedling and booting stage. HD961 a salt-tolerant rice landrace that grows along coastal beaches has disease insect pest resistance, tolerance, vigorous growth characteristics. We performed combined transcriptome metabolome analysis clarify salinity resistance mechanisms cultivar HD961, adapted soil at early The results showed antioxidant capacity were stronger than 9311...
Sugarcane (Saccharum spp. hybrid) is an important crop for sugar and biofuels, often suffers from water shortages during growth. Currently, there limited knowledge concerning the molecular mechanism involved in sugarcane response to drought stress (DS) whether chitooligosaccharide could alleviate DS. Here, we carried out a combined transcriptome metabolome of three different treatment groups: control group (CG), DS group, + (COS). A total 12,275 (6404 up-regulated 5871 down-regulated)...
Auxin response factor (ARF) is a critical regulator in the auxin signaling pathway, involved variety of plant biological processes. Here, gene members 24 SpapARFs and 39 SpnpARFs were identified two genomes Saccharum spontaneum clones AP85-441 Np-X, respectively. Phylogenetic analysis showed that all ARF genes clustered into four clades, which identical to those maize (Zea mays) sorghum (Sorghum bicolor). The structure domain composition this family are conserved large degree across species....
Red stripe disease in sugarcane caused by Acidovorax avenae subsp. (Aaa) is related to serious global losses yield. However, the underlying molecular mechanisms associated with responses of plants infection this pathogen remain largely unknown. Here, we used Illumina RNA-sequencing (RNA-seq) perform large-scale transcriptome sequencing two cultivars contrast gene expression patterns between Aaa and mock inoculations, identify key genes pathways involved defense infection. At 0–72 hours...
Cys-tathionine-β-synthase (CBS) domain-containing proteins (CDCPs) are essential for regulating plant responses to various biotic and abiotic stressors. This study describes the systematic identification characterization of CDCP family genes in Saccharum spontaneum. A total 95 SsCDCP eight phylogenetic groups were identified that distributed over 29 chromosomes AP85-441 genome. Most (78/95) SsCDCPs underwent fragment duplication events, 64 gene pairs located synteny blocks. Expression...
The pathogen of Pantoea stewartii (Ps) is the causal agent bacterial disease in corn and various graminaceous plants. Ps has two subspecies, subsp. stewartia (Pss) indologenes (Psi). This study presents complete genomes strains including ATCC 8199 isolated from maize PSCN1 causing wilt sugarcane. information will be helpful for taxonomy analysis this genus at whole-genome levels accurately discriminated subspecies Pss Psi.
Ratoon stunting disease (RSD), one of the most important diseases sugarcane, is caused by bacterium Leifsonia xyli subsp. (Lxx). Lxx infects sugarcane worldwide and RSD results in high yield losses varietal degeneration. It highly challenging to diagnose based on visual symptomatology because this does not exhibit distinct external internal symptoms. In study, a novel Lxx-specific primer pair Lxx-F1/Lxx-R1 was designed detect pathogen using conventional PCR assay. These primers were then...