Ekaterina Krasnopeeva

ORCID: 0000-0003-1493-7024
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About
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Research Areas
  • Lipid Membrane Structure and Behavior
  • Photoreceptor and optogenetics research
  • Bacterial Genetics and Biotechnology
  • Bacterial biofilms and quorum sensing
  • Micro and Nano Robotics
  • Molecular Biology Techniques and Applications
  • RNA and protein synthesis mechanisms
  • Bacteriophages and microbial interactions
  • RNA Research and Splicing
  • Microfluidic and Bio-sensing Technologies
  • Vibrio bacteria research studies
  • Force Microscopy Techniques and Applications
  • Slime Mold and Myxomycetes Research
  • Advanced Fluorescence Microscopy Techniques
  • Ion channel regulation and function
  • Ion Transport and Channel Regulation
  • Nitric Oxide and Endothelin Effects
  • Escherichia coli research studies
  • Skin Protection and Aging
  • Video Analysis and Summarization
  • Biofield Effects and Biophysics
  • Plant and Biological Electrophysiology Studies
  • Computational Physics and Python Applications
  • Photosynthetic Processes and Mechanisms
  • Protist diversity and phylogeny

Institute of Science and Technology Austria
2020-2024

University of Edinburgh
2019-2024

Laboratoire Jean Perrin
2020

Various toxic compounds disrupt bacterial physiology. While bacteria harbor defense mechanisms to mitigate the toxicity, these are often coupled physiological state of cells and become ineffective when physiology is severely disrupted.

10.1128/mbio.00676-21 article EN cc-by mBio 2021-07-13

Abstract For in vivo , single-cell imaging bacterial cells are commonly immobilised via physical confinement or surface attachment. Different attachment methods have been used both for atomic force and optical microscopy (including super resolution), some reported to affect physiology. However, a systematic comparison of the effects these on physiology is lacking. Here we present such bacterium Escherichia coli assess growth rate, size intracellular pH growing attached different, used,...

10.1038/s41598-019-55798-0 article EN cc-by Scientific Reports 2019-12-19

Maintaining intracellular homeostases is a hallmark of life, and key physiological variables, such as cytoplasmic pH, osmotic pressure, proton motive force (PMF), are typically interdependent. Using mathematical model, we argue that near neutral pH homeostasis implies cells must export ions other than protons to generate electrical potential across their plasma membrane. For Escherichia coli , proton:ion antiporters the only known cation efflux pumps, therefore predict principal function an...

10.1101/2021.11.19.469321 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2021-11-19

Abstract The bacterial flagellar motor enables bacteria to swim by rotating helical filaments that form a bundle at the back of cell. Escherichia coli ’s uses energy stored in proton motive force (PMF) generate torque driving this rotation. Until now, speed was thought be proportional PMF, irrespective viscous load. Here, we show PMF-speed proportionality saturates high load and and, thus, relationship is nonlinear regime. Furthermore, free swimming occurs close or within saturated regime,...

10.1101/2024.10.07.617036 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-10-07

Maintaining intracellular homeostases is a hallmark of life, and works to maintain multiple interconnected electrophysiological variables, such as near-neutral pH sufficient electrochemical gradient protons, the so-called proton motive force (PMF). To generate latter, relies on central metabolism move protons out cell, where in its preferred extracellular environments this not enough achieve reported physiological PMF values. Using mathematical modeling, we predict that also uses proton-ion...

10.1103/prxlife.2.043015 article EN cc-by PRX Life 2024-11-27

The speed of bacterial flagellar motor (BFM) is measured with back-focal-plane interferometry. Heavily attenuated optical trap (855 nm laser) used to detect the rotation a polystyrene bead attached truncated filament. Time course recorded position-sensitive detector.

10.17504/protocols.io.bch2it8e preprint EN 2020-02-13

ABSTRACT For in vivo , single-cell imaging bacterial cells are commonly immobilised via physical confinement or surface attachment. Different attachment methods have been used both for atomic force and optical microscopy (including super resolution), some reported to affect physiology. However, a systematic comparison of the effects these on physiology is lacking. Here we present such bacterium Escherichia coli assess growth rate, size intracellular pH growing attached different, used,...

10.1101/648840 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2019-05-24

Preparation of our standard tunnel-slide, used for BFM speed measurements and experiments involving rapid media exchange.

10.17504/protocols.io.bcjdiui6 preprint EN 2020-02-13

Single-cell in vivo cytoplasmic pH measurments with genetically encoded pHluorin sensor

10.17504/protocols.io.bhi7j4hn preprint EN 2020-06-15

Objectives: Purpose of the study evaluation cosmetic effect using patches by company “Aganyan” for facial rejuvenation. Materials and Methods: The was carried out in 106 participants with presence perioral wrinkles skin. Participants applied four (2 copper 2 zinc) on face area crosswise according to instructions. were eight hours every third day three months. Perioral assessed comparing photographs at beginning end each individual case. efficacy International Global Aesthetic Improvement...

10.58240/1829006x-2023.19.2-163 article EN BULLETIN OF STOMATOLOGY AND MAXILLOFACIAL SURGERY 2023-04-30

Abstract Since bacteria lack a nucleus, the location of mRNA molecules is determined by different characteristics encoded proteins, and transcriptome spatially arranged into cytosolic membrane-associated mRNA. While translation membrane protein-encoding has been studied in great mechanistic detail using biochemical methods, spatiotemporal dynamics this process remains poorly understood at subcellular level. Here, we investigate individual fluorescently labelled encoding transmembrane serine...

10.1101/2022.12.16.520495 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-12-16
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