A5031033768- RNA and protein synthesis mechanisms
- Genomics and Phylogenetic Studies
- RNA modifications and cancer
- Bacterial Genetics and Biotechnology
- Bacteriophages and microbial interactions
- Energy Efficient Wireless Sensor Networks
- Plant Pathogenic Bacteria Studies
- Legume Nitrogen Fixing Symbiosis
- Machine Learning in Bioinformatics
- Mobile Ad Hoc Networks
- Plant-Microbe Interactions and Immunity
- DNA and Nucleic Acid Chemistry
- Software Engineering Techniques and Practices
- Wireless Communication Networks Research
- ICT in Developing Communities
- Viral gastroenteritis research and epidemiology
- Security in Wireless Sensor Networks
- Infections and bacterial resistance
- Energy Harvesting in Wireless Networks
- Sleep and related disorders
- Bioinformatics and Genomic Networks
- IoT-based Smart Home Systems
- Impact of Technology on Adolescents
- IPv6, Mobility, Handover, Networks, Security
- Opportunistic and Delay-Tolerant Networks
Siksha O Anusandhan University
2025
Tezpur University
2013-2024
Limited battery powers of sensor nodes demand routing protocol for network that consume minimum possible amount energy and hence give longer life to the system. In a network, are potential source information they need send their sensed/collected remote base station (BS)/Sink. Generally, it needs fixed receive one bit an additional transmit same. This depends on transmission range. So, if all directly BS, then will quickly deplete energy. Therefore, multi-hop is needed network. LEACH (aW....
Introduction The propensity of nucleotide bases to form pairs, causes folding and the formation secondary structure in RNA. Therefore, purine (R): pyrimidine (Y) base-pairing is vital maintain uniform lateral dimension RNA structure. Transversions or base substitutions between R Y bases, are more detrimental stability structure, than transitions derived from A G C T. study transversion transition important understand evolutionary mechanisms 5′ 3′ untranslated (UTR) regions SARS-CoV-2. In...
Effective number of codons (N^c) and its variant N^'c (effective prime) are the two widely used methods for measuring unequal usage synonymous in coding sequences, known as codon bias (CUB). The mathematical formula calculating N^c values is giving inappropriate measures CUB case low abundance amino acids. In addition, magnitude error also varies according to degeneracy. this study, a modified has been developed measure more accurately. Online implementations available web portal at...
Abstract Ralstonia solanacearum causes a lethal bacterial wilt disease in many plants by colonizing the vascular tissues of hosts. Upon inoculation tomato seedlings through either leaf or root, wilting symptoms occur first at apical region and then proceed downward along shoot. The systemic order initiation progression host, independent site pathogen inoculation, is yet to be investigated. To understand more clearly, we have carried out systematic study localization GUS staining inoculated...
The different triplets encoding the same amino acid, termed as synonymous codons, are not equally abundant in a genome. Factors such G + C% and tRNA known to influence their abundance However, order of nucleotide each codon per se might also be another factor impacting on its values. Of codons for specific acids, some preferentially used high expression genes that referred ‘optimal codons’ (OCs). In this study, we compared OCs 18 acids 221 species bacteria. It is observed there acid...
In Ralstonia solanacearum, a devastating phytopathogen whose metabolism is poorly understood, we observed that the Entner-Doudoroff (ED) pathway and nonoxidative pentose phosphate (non-OxPPP) bypass glycolysis OxPPP under glucose oxidation. Evidence derived from 13C stable isotope feeding genome annotation-based comparative metabolic network analysis supported observations. Comparative currently available 53 annotated R. solanacearum strains, including recently reported strain (F1C1),...
A common approach to estimate the strength and direction of selection acting on protein coding sequences is calculate dN/dS ratio. The method has been widely used by many researchers critical reviews have made its application after proposition Nei Gojobori in 1986. However, still evolving considering non-uniform substitution rates pretermination codons. In our study SNPs 586 genes across 156 Escherichia coli strains, synonymous polymorphism 2-fold degenerate codons were higher comparison...
Wireless sensor network (WSN) is usually used in civil and military applications for gathering data from the surrounding environment. As WSN a self configured mostly works an unattended wireless environment, there lot of scope adversaries to tamper sensed as well may try alter underlying working principle network. Several factors like, physical exposure nodes adversaries, ad-hoc infrastructure etc. makes more prone security threats. Providing solution again difficult task due inherent...
Next generation wireless network is foreseen as the combination of heterogeneous networks capable providing enhanced services to mobile users. Vertical handoff a crucial issue in service users, network. To maintain continuous during vertical period, procedure should consider noise and interference networks. In this article, we have proposed an algorithm based on received signal inference plus ratio (SINR) for between GPRS Wi-Fi Here SINR from converted equivalent vice-versa, so that can...
The enterprise software sector is experiencing a significant transformation driven by rapid technological progress and evolving business needs. An effective release management process crucial for the solution providers customers, as they incorporate principles of Industry 4.0 5.0. With growing dependence on solutions services, ensuring their quality, reliability, security highly necessary. incorporates strategic planning, regression testing, accurate deployment, continuous monitoring...
Essential genes are crucial for understanding the cellular processes of an organism. In this article, we have done extensive machine learning-based analysis single nucleotide composition in 35 bacterial genomes across several phylogenetic groups. With objective classifying essential from remaining genes, used seven classifiers - logistic regression, Gaussian Naïve Bayes, k-nearest neighbours, decision tree, random forest, extreme gradient boosting and support vector machine. Random forest...
High error rate in SARS-CoV-2 genome replication allows the virus to adapt different environments and selective pressures. In this study, 35% of codons protein-coding sequences were observed have undergone base substitution mutations. Machine learning based comparative analysis usage between conserved remaining variable genes revealed that codon patterns two groups are significantly different. Codon values region resemble composition, whereas regions highly variable. This differential...