Yanchao Xu

ORCID: 0000-0003-2432-3325
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About
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Research Areas
  • Research in Cotton Cultivation
  • Plant Virus Research Studies
  • Plant Molecular Biology Research
  • Plant Stress Responses and Tolerance
  • Photosynthetic Processes and Mechanisms
  • Plant tissue culture and regeneration
  • Plant and Fungal Interactions Research
  • Plant Reproductive Biology
  • Plant nutrient uptake and metabolism
  • Plant Gene Expression Analysis
  • Plant-Microbe Interactions and Immunity
  • Plant responses to water stress
  • MicroRNA in disease regulation
  • Genetics and Plant Breeding
  • Plant Parasitism and Resistance
  • Biofuel production and bioconversion
  • Banana Cultivation and Research
  • Polysaccharides and Plant Cell Walls
  • CRISPR and Genetic Engineering
  • Plant Genetic and Mutation Studies
  • Pasture and Agricultural Systems
  • Histone Deacetylase Inhibitors Research
  • Sugarcane Cultivation and Processing
  • Soil Carbon and Nitrogen Dynamics
  • Allelopathy and phytotoxic interactions

Chinese Academy of Agricultural Sciences
2018-2025

Cotton Research Institute
2017-2024

Zhengzhou University
2019-2024

Fudan University
2022-2023

Institute of Animal Sciences
2023

Nanjing Drum Tower Hospital
2023

Jiangsu University
2023

Huazhong Agricultural University
2022-2023

McGill University
2022

University of California, Davis
2022

Cotton is a pioneer of saline land crop, while salt stress still causes its growth inhibition and fiber production decrease. Phenotype identification showed better tolerance wild diploid cotton species Gossypium klotzschianum. To elucidate the salt-tolerant mechanisms in G. klotzschianum, we firstly detected changes hormones, H2O2 glutathione (GSSH GSH), then investigated gene expression pattern roots leaves treated with 300 mM NaCl for 0, 3, 12, 48 h, each time control by RNA-seq on...

10.1371/journal.pone.0178313 article EN cc-by PLoS ONE 2017-05-26

Allotetraploid cotton (Gossypium) species represents a model system for the study of plant polyploidy, molecular evolution, and domestication. Here, chromosome-scale genome sequences were obtained assembled two recently described wild tetraploid cotton, Gossypium ekmanianum [(AD)6, Ge] stephensii [(AD)7, Gs], one early form domesticated hirsutum, race punctatum [(AD)1, Ghp]. Based on phylogenomic analysis, we provide dated whole-genome level perspective evolution clade resolved evolutionary...

10.1073/pnas.2208496119 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2022-09-19

The diploid wild cotton species Gossypium australe possesses excellent traits including resistance to disease and delayed gland morphogenesis, has been successfully used for distant breeding programmes incorporate into domesticated cotton. Here, we sequenced the G. genome by integrating PacBio, Illumina short read, BioNano (DLS) Hi-C technologies, acquired a high-quality reference with contig N50 of 1.83 Mb scaffold 143.60 Mb. We found that 73.5% is composed various repeat sequences,...

10.1111/pbi.13249 article EN cc-by Plant Biotechnology Journal 2019-09-03

Cotton (Gossypium spp.) is the number one crop cultivated for fiber production and cornerstone of textile industry. Drought salt stress are major abiotic stresses, which can have a huge economic impact on cotton production; this has been aggravated with continued climate change, compounded by pollution. Various survival strategies evolved plants include induction various responsive genes, such as cyclin dependent kinases (CDKs). In study, we performed whole-genome identification analysis CDK...

10.3390/ijms19092625 article EN International Journal of Molecular Sciences 2018-09-05

We identified 102, 51 and proteins encoded by the trihelix genes in Gossypium hirsutum, arboreum raimondii, respectively. RNA sequence data real-time quantitative polymerase chain reaction analysis showed that Gh_A05G2067 (GT-2) was highly upregulated under drought salt stress conditions. Transient expression of GT-2-green fluorescent protein fusion protoplast GT-2 localized nucleus. The overexpression conferred an enhanced tolerance to cotton, with lower malondialdehyde, hydrogen peroxide...

10.1111/ppl.12920 article EN cc-by Physiologia Plantarum 2019-01-10

Verticillium wilt that is caused by dahliae, does result in massive annual yield losses and fiber quality decline cotton. Control conventional mechanisms not possible due to a wide host range the longevity of dormant fungi soil case absence suitable host. Plants have developed various boost their immunity against diseases, one through induction genes. In this research, we carried out RNA sequencing then identified members adenosine triphosphate (ATP)-binding cassette (ABC) proteins be...

10.3390/genes10020110 article EN Genes 2019-02-01

We identified 672, 374, and 379 CYPs proteins encoded by the genes in Gossypiumhirsutum, Gossypiumraimondii, Gossypiumarboreum, respectively. The were found to be distributed all 26 chromosomes of tetraploid cotton, with chrA05, chrA12, their homeolog harboring highest number genes. physiochemical properties CYP450 varied terms protein lengths, molecular weight, isoelectric points (pI), even grand hydropathy values (GRAVY). However, over 99% cotton had GRAVY below 0, which indicated that...

10.3390/genes10030226 article EN Genes 2019-03-18

Cotton production is on the decline due to ever-changing environmental conditions. Drought and salinity stress contribute over 30% of total loss in cotton production, situation has worsened more narrow genetic base cultivated upland cotton. The diversity been eroded years intense selection inbreeding. To break bottleneck, wild progenitors offer unique traits which can be introgressed into cotton, thereby improving their performance. In this research, we developed a BC₂F₂ population between...

10.3390/ijms19061614 article EN International Journal of Molecular Sciences 2018-05-30

Reactive oxygen species (ROS) are important molecules in the plant, which involved many biological processes, including fiber development and adaptation to abiotic stress cotton. We carried out transcription analysis determine evolution of ROS genes analyzed their expression levels various tissues cotton plant under conditions. There were 515, 260, 261 network that identified

10.3390/ijms20081863 article EN International Journal of Molecular Sciences 2019-04-15

Cotton grows in altering environments that are often unfavorable or stressful for its growth and development. Consequently, the plant must cope with abiotic stresses such as soil salinity, drought, excessive temperatures. Alkali-salt stress response remains a cumbersome biological process is regulated via multifaceted transcriptional regulatory network cotton.To discover molecular mechanisms of alkali-salt cotton, comprehensive transcriptome analysis was carried out after treatment three...

10.1186/s12864-019-6375-9 article EN cc-by BMC Genomics 2020-01-06

Low temperature is one of the key environmental stresses that impair plant growth and significantly restricts productivity spatial distribution crop plants. Gossypium thurberi, a wild diploid cotton species, has adapted to wide range temperatures exhibits better tolerance chilling stress. Here, we compared phenotypes physiochemical changes in G. thurberi under cold stress found this species indeed showed tolerance. Therefore, understand molecular mechanisms transcription leaves by...

10.1093/aobpla/plz045 article EN cc-by AoB Plants 2019-08-09

Chemical defoliation is an important part of cotton mechanical harvesting, which can effectively reduce the impurity content. Thidiazuron (TDZ) most used chemical defoliant on cotton. To better clarify mechanism TDZ promoting leaf abscission, a greenhouse experiment was conducted two cultivars (CRI 12 and CRI 49) by using 100 mg L−1 at eight-true-leaf stage. Results showed that significantly promoted formation abscission zone abscission. Although antioxidant enzyme activities were improved,...

10.3390/ijms21082738 article EN International Journal of Molecular Sciences 2020-04-15

Drought and low-temperature stresses are the most prominent abiotic affecting cotton. Wild cotton being exposed to harsh environments has more potential cope with both biotic stresses. Exploiting wild material induce resistant germplasm would be of greater interest. The candidate gene was identified in BC2F2 population among Gossypium tomentosum hirsutum as male donor parent noted for its drought tolerance recurrent a high yielding but susceptible species by genotyping sequencing (GBS)...

10.3389/fpls.2021.759312 article EN cc-by Frontiers in Plant Science 2021-12-16

Cotton (Gossypium hirsutum) provides the largest natural fiber for textile manufacturing industries, but its production is on decline due to effects of salinity. Soil salt-alkalization leads damage in cotton growth and a decrease yields. Hyperosmolality-gated calcium-permeable channels (OSCA) have been found be involved detection extracellular changes which trigger an increase cytosolic free calcium concentration. Hyperosmolality-induced ion increases widely speculated playing role...

10.1186/s42397-019-0028-z article EN cc-by Journal of Cotton Research 2019-07-31

The efficient detection and initiation of appropriate response to abiotic stresses are important plants survival. plant G-protein coupled receptors (GPCRs) diverse membranous proteins that responsible for signal transduction. In this research work, we identified a novel gene the GPCR domain, transformed carried out functional analysis in Arabidopsis under drought cold stresses. transgenic lines exposed stress conditions showed higher germination rate, increased root length fresh biomass...

10.1186/s12864-019-5972-y article EN cc-by BMC Genomics 2019-08-14

Abstract Background Cotton is a valuable economic crop and the main significant source of natural fiber for textile industries globally. The effects drought salt stress pose challenge to strong large-scale production due ever-changing climatic conditions. However, plants have evolved number survival strategies, among them induction various stress-responsive genes such as ribosomal protein large ( RPL ) gene. gene families encode critical proteins, which alleviate in plants. In this study,...

10.1186/s42397-021-00102-7 article EN cc-by Journal of Cotton Research 2021-10-01

Crops face several environmental stresses (biotic and abiotic), thus resulting in severe yield losses. Around the globe abiotic are main contributors of plant damages, primarily drought salinity. Many genes transcription factors involved biotic stress responses. NAC TF (Transcription Factors) improves tolerance to by controlling physiological enzyme activities crops.In current research, GhNAC072 a highly upregulated RNA-Seq was identified as hub gene co-expression network analysis (WGCNA)....

10.1186/s12864-022-08876-z article EN cc-by BMC Genomics 2022-09-12

The most devastating abiotic factors worldwide are drought and salinity, causing severe bottlenecks in the agricultural sector. To acclimatize to these harsh ecological conditions, plants have developed complex molecular mechanisms involving diverse gene families. Among them, S-adenosyl-L-methionine synthetase (SAMS) genes initiate physiological, morphological, changes enable adapt appropriately. We identified characterized 16 upland cotton SAMS (GhSAMSs). Phylogenetic analysis classified...

10.3390/agronomy13020612 article EN cc-by Agronomy 2023-02-20

Current climate change scenarios are posing greater threats to the growth and development of plants. Thus, significant efforts required that can mitigate negative effects drought on cotton plant. GDSL esterase/lipases offer an imperative role in plant stress tolerance. However, thesystematic functional roles gene family, particularly under water deficit conditions have not yet been explored.In this study, 103, 99, 198, 203, 239, 249, 215 proteins were identified eight genomes i.e., Gossypium...

10.1186/s12870-022-04001-0 article EN cc-by BMC Plant Biology 2023-01-07
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