A5016339639- Species Distribution and Climate Change
- Research Data Management Practices
- Scientific Computing and Data Management
- Marine animal studies overview
- Environmental Monitoring and Data Management
- Pleistocene-Era Hominins and Archaeology
- Geology and Paleoclimatology Research
- Coral and Marine Ecosystems Studies
- Geological and Geophysical Studies Worldwide
- Biomedical Text Mining and Ontologies
- Geochemistry and Geologic Mapping
- Marine and coastal plant biology
Université Paris-Sud
2023
Fondation Pour la Recherche Sur la Biodiversité
2022
Office Français de la Biodiversité
2022
Metropolitan Hospital
2022
Sorbonne Université
2022
Université Paris 1 Panthéon-Sorbonne
2022
Structure et Instabilité des Génomes
2022
Ifremer
2022
Institut de Recherche pour le Développement
2022
PatriNat
2021
Abstract Numerous conceptual frameworks exist for best practices in research data and analysis (e.g., Open Science FAIR principles). In practice, there is a need further progress to improve transparency, reproducibility, confidence ecology. Here, we propose practical operational framework researchers experts ecology achieve building analytical procedures from individual projects production-level pipelines. We introduce the concept of atomization identify steps that support generalization by...
Numerous conceptual frameworks exist for good practices in research data and analysis (e.g. Open Science FAIR principles). In practice, there is a need further progress to improve transparency, reproducibility, confidence ecology. Here, we propose practical operational framework achieve building analytical procedures based on atomisation generalisation. We introduce the concept of identify steps which support generalisation by allowing us go beyond single analyses. These guidelines were...
In the French West Indies, more than 20 species of cetaceans have been observed over last decades. The recognition this hotspot biodiversity marine mammals, in Exclusive Economic Zone motivated government to create 2010 a protected area (MPA) dedicated conservation mammals: Agoa Sanctuary. Threats that cetacean populations face are multiple, but well-documented. Cetacean can only be achieved if relevant and reliable data available, starting by occurrence data. Guadeloupe Archipelago addition...
"FAIR (Findable, Accessible, Interoperable, Reusable) principles" (Wilkinson et al. 2016) and "open science" are two complementary movements in biodiversity science. Although we need to transition making scientific data associated material more FAIR, this does not necessarily imply open or source algorithms. Here, based on the experience of French Biodiversity Data Hub ("Pôle national de données Biodiversité" - PNDB), which is an e-infrastructure for by researchers, want showcase how...
Data quality and documentation are at the core of FAIR (Findable, Accessible, Interoperable, Reusable) principles (Wilkinson et al. 2016). Regarding biodiversity more broadly ecology domains, complementary solutions well-known data standard (notably through Darwin Core (Wieczorek 2012)) orientation emerging from intensive use EML (Ecological Metadata Language (Michener 1997)) metadata standard. These notably capitalize on using: semantic annotation documents that describe attributes,...
The French national biodiversity data hub (“Pôle National de Données Biodiversité” - PNDB) is a e-infrastructure created in 2018 and led by the Museum of Natural History, contributing to Open Science policy Ministry Higher Education, Research Innovation (MESRI). PNDB contributes building an integrative framework taking into account over long term (from origins life future models), at all biological scales molecule socio-ecosystem), its interactions, providing tools services for description,...
Integration of biological data with different ecological scales is complex! The biodiversity community (scientists, policy makers, managers, citizen, NGOs) needs to build a framework harmonized and interoperable from raw, heterogeneous scattered datasets. Such will help observation, measurement understanding the spatio-temporal dynamic local global scales. One most relevant approaches reach that aim concept Essential Biodiversity Variables (EBV). As we can potentially extract lot information...