Chenchen Qin

ORCID: 0009-0009-8763-8616
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About
Contact & Profiles
Research Areas
  • T-cell and B-cell Immunology
  • Immunotherapy and Immune Responses
  • Hematopoietic Stem Cell Transplantation
  • Electrocatalysts for Energy Conversion
  • Intracerebral and Subarachnoid Hemorrhage Research
  • AI in cancer detection
  • Immune Cell Function and Interaction
  • Optical Imaging and Spectroscopy Techniques
  • Medical Image Segmentation Techniques
  • CO2 Reduction Techniques and Catalysts
  • Radiomics and Machine Learning in Medical Imaging
  • Photoacoustic and Ultrasonic Imaging
  • Acute Ischemic Stroke Management
  • vaccines and immunoinformatics approaches
  • Infrared Thermography in Medicine
  • Optical Coherence Tomography Applications
  • Neurosurgical Procedures and Complications
  • Advanced Thermoelectric Materials and Devices
  • RNA and protein synthesis mechanisms
  • Advanced battery technologies research
  • Ultrasound Imaging and Elastography
  • Advanced Neuroimaging Techniques and Applications
  • Acute Myeloid Leukemia Research
  • Advanced MRI Techniques and Applications
  • Ionic liquids properties and applications

Tencent (China)
2021-2025

Anhui University
2022-2025

The First Affiliated Hospital, Sun Yat-sen University
2025

Sun Yat-sen University
2025

Nanjing University of Science and Technology
2024-2025

Peking University
2017-2024

Peking University First Hospital
2017-2024

Changzhou University
2023

Shenzhen University Health Science Center
2018-2020

First Affiliated Hospital of Zhengzhou University
2016

ABUS, or Automated breast ultrasound, is an innovative and promising method of screening for examination. Comparing to common B-mode 2D ABUS attains operator-independent image acquisition also provides 3D views the whole breast. Nonetheless, reviewing images particularly time-intensive errors by oversight might occur. For this study, we offer convolutional network, which used automated cancer detection, in order accelerate meanwhile obtain high detection sensitivity with low false positives...

10.1109/tmi.2019.2936500 article EN IEEE Transactions on Medical Imaging 2019-08-22

Abstract Pre-trained large language models demonstrate potential in extracting information from DNA sequences, yet adapting to a variety of tasks and data modalities remains challenge. To address this, we propose DNAGPT, generalized pre-training model trained on over 200 billion base pairs all mammals. By enhancing the classic GPT with binary classification task (DNA sequence order), numerical regression (guanine-cytosine content prediction), comprehensive token language, DNAGPT can handle...

10.1101/2023.07.11.548628 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-07-12

Abstract Accurate prediction of antibody-antigen complex structures holds significant potential for advancing biomedical research and the design therapeutic antibodies. Currently, structure protein monomers has achieved considerable success, promising progress been made in extending this achievement to complexes. However, despite these advancements, fast accurate remains a challenging unresolved issue. Existing end-to-end methods, which rely on homology templates, exhibit sub-optimal...

10.1101/2024.02.05.578892 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-02-08

Electroreduction of carbon dioxide into readily collectable and high-value carbon-based fuels is greatly significant to overcome the energy environmental crises yet challenging in development robust highly efficient electrocatalysts. Herein, a bismuth (Bi) heterophase electrode with enriched amorphous/crystalline interfaces was fabricated via cathodically situ transformation Bi-based metal-phenolic complexes (Bi-tannic acid, Bi-TA). Compared amorphous or crystalline Bi catalyst, structure...

10.1021/acsami.3c10011 article EN ACS Applied Materials & Interfaces 2023-09-28

Heterophase-boundary-abundant bismuth nanosheets were fabricated via facile electrochemical reduction of Bi-based coordination polymers, exhibiting excellent performance for CO 2 reduction.

10.1039/d3ta08011k article EN Journal of Materials Chemistry A 2024-01-01

Curved cobalt single atom catalysts could realize highly efficient CO 2 electroreduction, exhibiting industrial-level current density and high faradaic efficiency in pH-universal electrolytes.

10.1039/d3ta07074c article EN Journal of Materials Chemistry A 2024-01-01

Purpose Breast cancer is the most common and leading cause of cancer‐related deaths for women all over world. Recently, automated breast ultrasound (ABUS) has become a new promising screening modality whole examination. However, reviewing volumetric ABUS time‐consuming lesions could be missed during Therefore, computer‐aided detection in volume extremely expected to help clinician screening. Methods We develop novel end‐to‐end 3D convolutional network volume, order accelerate meanwhile...

10.1002/mp.14389 article EN Medical Physics 2020-07-13

Abstract Alpha-beta T cell receptor ( αβ TCR) recognition of peptide-major histocompatibility complexes (pMHCs) is a cornerstone the adaptive immune system. Fast and accurate modeling TCR-pMHC structures crucial for understanding TCR pMHCs at molecular level, which essential development TCR-based therapeutics vaccines. Despite significant interest, this challenge remains unresolved due to diversity interactions limited structural data. Here, we present tFold-TCR, high-throughput, end-to-end...

10.1101/2025.01.12.632367 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2025-01-15

Abstract Single atom iron‐nitrogen‐carbon (Fe‐N‐C) catalysts with a planar Fe─N 4 structure are widely investigated as potential alternatives to platinum‐based materials for oxygen reduction reaction (ORR), while they still suffer from the imperfect adsorption and activation of intermediates, limiting their efficiency. Herein, Fe single‐atom catalyst biomimetic square pyramidal N 1 ‐Fe‐N site supported by honeycomb‐like porous carbon (SA‐FeN 5 /HPC) is successfully prepared supramolecular...

10.1002/smll.202500897 article EN Small 2025-02-24

Acute myeloid leukemia (AML) is a prevalent and potentially fatal hematologic malignancy with limited improvements in survival rates over the past few decades. ITGAM, encoding CD11b, significant integrin component leukocytes, involved various biological processes. However, its role AML prognosis immune cell infiltration remains poorly understood. This study investigated prognostic significance potential function of ITGAM using comprehensive bioinformatic analyses. expression was markedly...

10.1111/ijlh.14444 article EN International Journal of Laboratory Hematology 2025-03-07

Abstract The role of the hydrogen bond network (HBN) within Helmholtz plane (HP) in regulating evolution kinetics for catalyst development remains ambiguous owing to lack fundamental understanding. Herein, leveraging ab initio molecular dynamics simulations, it is discovered that introducing weak metal bonds Ru/RuO 2 remarkably reshapes HBN. Subsequently, nanosheets loaded with single Ga atoms (Ga SA ‐Ru/RuO ) are successfully synthesized using a one‐step annealing strategy. In situ...

10.1002/adfm.202503701 article EN cc-by Advanced Functional Materials 2025-04-03

Accurately predicting the antigen-binding specificity of adaptive immune receptors (AIRs), such as T-cell (TCRs) and B-cell (BCRs), is essential for discovering new therapies. However, diversity AIR chain sequences limits accuracy current prediction methods. This study introduces SC-AIR-BERT, a pre-trained model that learns comprehensive sequence representations paired chains to improve binding prediction. SC-AIR-BERT first 'language' through self-supervised pre-training on large cohort from...

10.1093/bib/bbad191 article EN Briefings in Bioinformatics 2023-05-18

Pre-trained large language models demonstrate potential in extracting information from DNA sequences, yet adapting to a variety of tasks and data modalities remains challenge. To address this, we propose DNAGPT, generalized pre-training model trained on over 200 billion base pairs all mammals. By enhancing the classic GPT with binary classification task (DNA sequence order), numerical regression (guanine-cytosine content prediction), comprehensive token language, DNAGPT can handle versatile...

10.48550/arxiv.2307.05628 preprint EN other-oa arXiv (Cornell University) 2023-01-01

Lymphocyte trafficking via chemokine receptors such as C-C receptor 5 (CCR5) and CXCR3 plays a critical role in the pathogenesis of acute graft-versus-host disease (aGVHD). Our previous studies showed that addition CCR5 or antagonists could only slightly alleviate development aGVHD. Given specificity T lymphocytes bearing CCR5, we investigated whether combined blockade further attenuate murine A mouse model aGVHD was established to assess efficacy and/or on The distribution calculated by...

10.1093/intimm/dxae033 article EN cc-by-nc International Immunology 2024-05-22

Abstract The central dogma serves as a fundamental framework for understanding the flow and expression of genetic information within living organisms, facilitating connection diverse biological sequences across molecule types. In this study, we present CD-GPT (Central Dogma Generative Pretrained Transformer), generative foundation model comprising 1 billion parameters, aiming to capture intricate system-wide molecular interactions in systems. We introduce concept unified representational...

10.1101/2024.06.24.600337 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-06-28

Purpose Volumetric medical image registration has important clinical significance. Traditional methods may be time‐consuming when processing large volumetric data due to their iterative optimizations. In contrast, existing deep learning‐based networks can obtain the quickly. However, most of them require independent rigid alignment before deformable registration; these two steps are often performed separately and cannot end‐to‐end. Methods We propose an end‐to‐end joint affine network for...

10.1002/mp.14674 article EN Medical Physics 2020-12-20

Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing solutions require separate rigid alignment before deformable registration, may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal network (referred as EPReg) unsupervised volumetric registration. Specifically, we to fully exploit useful complementary information from multi-level feature pyramids predict...

10.3389/fnins.2020.620235 article EN cc-by Frontiers in Neuroscience 2021-01-21

Volumetric medical image registration has important clinical significance. Traditional methods may be time-consuming when processing large volumetric data due to their iterative optimizations. In contrast, existing deep learning-based networks can obtain the quickly. However, most of them require independent rigid alignment before deformable registration; these two steps are often performed separately and cannot end-to-end. Moreover, ground-truth is difficult for supervised learning methods....

10.1109/embc44109.2020.9176475 article EN 2020-07-01

We attempt to generate a definition of delayed perihematomal edema expansion (DPE) and analyze its time course, risk factors, clinical outcomes. A multi-cohort data was derived from the Chinese Intracranial Hemorrhage Image Database (CICHID). non-contrast computed tomography (NCCT) -based deep learning model constructed for fully automated segmentation hematoma (PHE). Time course PHE evolution correlated initial volume volumetrically assessed. Predictive values DPE were calculated through...

10.3389/fimmu.2022.911207 article EN cc-by Frontiers in Immunology 2022-05-09
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