Sudeep D. Ghate

ORCID: 0000-0001-9996-3605
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Plant Pathogens and Fungal Diseases
  • Plant Pathogenic Bacteria Studies
  • Mycorrhizal Fungi and Plant Interactions
  • Fungal Biology and Applications
  • Computational Drug Discovery Methods
  • Helicobacter pylori-related gastroenterology studies
  • Freshwater macroinvertebrate diversity and ecology
  • Microbial Community Ecology and Physiology
  • Antifungal resistance and susceptibility
  • Gut microbiota and health
  • Peptidase Inhibition and Analysis
  • Mycobacterium research and diagnosis
  • Poxvirus research and outbreaks
  • Herpesvirus Infections and Treatments
  • Wastewater Treatment and Nitrogen Removal
  • Phytochemicals and Antioxidant Activities
  • Click Chemistry and Applications
  • Diatoms and Algae Research
  • Antibiotic Resistance in Bacteria
  • Bacterial biofilms and quorum sensing
  • Genomics and Phylogenetic Studies
  • Reproductive Biology and Fertility
  • Kidney Stones and Urolithiasis Treatments
  • Date Palm Research Studies
  • Aquaculture disease management and microbiota

Nitte University
2021-2025

K S Hegde Medical Academy
2021-2025

Creative Commons
2022

Yenepoya University
2019-2022

National Chung Hsing University
2021

Chinese University of Hong Kong
2021

Zhongshan Hospital of Xiamen University
2021

Xiamen Medical College
2021

National Taipei University
2021

Food Industry Research and Development Institute
2021

Scott D. Tiegs David M. Costello Mark W. Isken Guy Woodward Peter B. McIntyre and 95 more Mark O. Gessner Éric Chauvet Natalie A. Griffiths Alexander S. Flecker Vicenç Acuña Ricardo Albariño Daniel C. Allen Cecilia Alonso Patricio Andino Clay P. Arango Jukka Aroviita Marcus Vinícius Moreira Barbosa Leon A. Barmuta Colden V. Baxter Thomas Bell Brent J. Bellinger Luz Boyero Lee E. Brown Andreas Bruder Denise A. Bruesewitz Francis J. Burdon Marcos Callisto Cristina Canhoto Krista A. Capps María M. Castillo Joanne E. Clapcott Fanny Colas J. Checo Colón-Gaud Julien Cornut Verónica Crespo‐Pérez Wyatt F. Cross Joseph M. Culp Michaël Danger Olivier Dangles Elvira de Eyto Alison M. Derry Verónica Díaz Villanueva Michael M. Douglas Arturo Elosegi Andrea C. Encalada Sally A. Entrekin Rodrigo Espinosa Diana Ethaiya Verónica Ferreira Carmen Ferriol Kyla M. Flanagan Tadeusz Fleituch Jennifer J. Follstad Shah André Frainer Nikolai Friberg Paul C. Frost Erica A. García Liliana García Lago Pavel García Sudeep D. Ghate Darren P. Giling Alan Gilmer José Francisco Gonçalves Rosario Karina Gonzales Manuel A. S. Graça Michael Grace Hans‐Peter Grossart François Guérold Vladislav Gulis Luiz Ubiratan Hepp Scott N. Higgins Takuo Hishi Joseph Huddart John Hudson Moss Imberger Carlos Iñiguez‐Armijos Tomoya Iwata David J. Janetski Eleanor Jennings Andrea E. Kirkwood Aaron A. Koning Sarian Kosten Kevin A. Kuehn Hjalmar Laudon Peter R. Leavitt Aurea Luiza Lemes da Silva Shawn Leroux Carri J. LeRoy Peter J. Lisi Richard A. MacKenzie Amy Marcarelli Frank O. Masese Brendan G. McKie Adriana O. Medeiros Kristian Meissner Marko Miliša Shailendra Mishra Yo Miyake Ashley H. Moerke Shorok Mombrikotb

An experiment in >1000 river and riparian sites found spatial patterns controls of carbon processing at the global scale.

10.1126/sciadv.aav0486 article EN cc-by-nc Science Advances 2019-01-04
Thibault Datry Arnaud Foulquier Roland Corti Daniel von Schiller Klement Tockner and 89 more Clara Mendoza‐Lera Jean‐Christophe Clément Mark O. Gessner Marcos Moleón Rachel Stubbington Björn Gücker R. Albariño Daniel C. Allen Florian Altermatt María Isabel Arce Shai Arnon Damien Banas Andy Banegas‐Medina E. Beller Melanie L. Blanchette Juan F. Blanco J. J. Blessing Iola G. Boëchat Kate S. Boersma M. T. Bogan Núria Bonada Nick Bond K. C. Brintrup Barría Andreas Bruder Ryan M. Burrows Tommaso Cancellario Cristina Canhoto Stephanie M. Carlson Sophie Cauvy‐Fraunié Núria Cid M. Danger Bianca de Freitas Terra Anna Maria De Girolamo Evans De La Barra Rubén del Campo Verónica Díaz Villanueva Fiona Dyer Arturo Elosegi Émile Faye D. Dudley Williams Brian Four Sarig Gafny Sudeep D. Ghate R. Gómez Lluís Gómez‐Gener Manuel A. S. Graça Simone Guareschi F. Hoppeler Jason L. Hwan J. Iwan Jones S. Kubheka Alex Laini Simone D. Langhans Catherine Leigh C. J. Little Stefan Lorenz Jonathan C. Marshall Eduardo J. Martín Angus R. McIntosh Elisabeth I. Meyer Marko Miliša Musa C. Mlambo Manuela Morais Nabor Moya Peter Negus Dev Niyogi A. Papatheodoulou Isabel Pardo Petr Pařil Steffen U. Pauls Vladimir Pešić Marek Polášek Christopher T. Robinson Pablo Rodríguez‐Lozano Robert J. Rolls María del Mar Sánchez‐Montoya Ana Savić Oleksandra Shumilova Kandikere R. Sridhar Alisha Steward R. Storey Amina Taleb A. Uzan Ross Vander Vorste Nathan J. Waltham C. Woelfle-Erskine Dominik Žák C. Zarfl Annamaria Zoppini

10.1038/s41561-018-0134-4 article EN Nature Geoscience 2018-05-18

Abstract Nitrogen species such as ammonia and nitrite are considered major stressors in modern aquaculture practices. We developed enrichments of oxidising bacteria (AOB) (NOB) for effective mitigation nitrogenous wastes the shrimp culture operations. The objective this study was to understand microbial community composition AOB NOB using V3-V4 region 16S rDNA gene by Illumina MiSeq sequencing. analysis revealed 2948 1069 OTUs at 97% similarity index Shannon alpha diversity 7.64 4.85...

10.1038/s41598-020-62183-9 article EN cc-by Scientific Reports 2020-03-23

Azole-resistant Candida infections are on the rise. Resistant substitutions at Y132 in sterol 14α-demethylase, key target of azole drugs, frequent. However, it is unclear why only some favoured or how they exert differential effects different azoles. Reported instances were collected from literature. Extensive molecular dynamics simulations 14α-demethylase bound to fluconazole VT1161 (VT1) performed using GROMACS, and ligand-binding free energies computed quantify various...

10.1080/07391102.2025.2479847 article EN Journal of Biomolecular Structure and Dynamics 2025-03-17
Scott D. Tiegs Krista A. Capps David M. Costello John P. Schmidt Christopher J. Patrick and 95 more Jennifer J. Follstad Shah Carri J. LeRoy Vicenç Acuña Ricardo Albariño Daniel C. Allen Cecilia Alonso Patricio Andino Clay P. Arango Jukka Aroviita Marcus Vinícius Moreira Barbosa Leon A. Barmuta Colden V. Baxter Brent J. Bellinger Luz Boyero Lyubov Bragina Lee E. Brown Andreas Bruder Denise A. Bruesewitz Francis J. Burdon Marcos Callisto Antonio Camacho Cristina Canhoto María M. Castillo Éric Chauvet Joanne E. Clapcott Fanny Colas J. Checo Colón-Gaud Julien Cornut Verónica Crespo‐Pérez Wyatt F. Cross Joseph M. Culp Michaël Danger Olivier Dangles Elvira de Eyto Alison M. Derry Verónica Díaz Villanueva Michael M. Douglas Arturo Elosegi Andrea C. Encalada Sally A. Entrekin Rodrigo Espinosa Verónica Ferreira Carmen Ferriol Kyla M. Flanagan Alexander S. Flecker Tadeusz Fleituch André Frainer Nikolai Friberg Paul C. Frost Erica A. García Liliana García-Lago Pavel García Mark O. Gessner Sudeep D. Ghate Darren P. Giling Alan Gilmer José Francisco Gonçalves Rosario Karina Gonzales Manuel A. S. Graça Michael Grace Natalie A. Griffiths Hans‐Peter Grossart François Guérold Vladislav Gulis Pablo E. Gutiérrez‐Fonseca Luiz Ubiratan Hepp Scott N. Higgins Takuo Hishi Joseph Huddart John Hudson Moss Imberger Carlos Iñiguez‐Armijos Mark W. Isken Tomoya Iwata David J. Janetski Andrea E. Kirkwood Aaron A. Koning Sarian Kosten Kevin A. Kuehn Hjalmar Laudon Peter R. Leavitt Aurea Luiza Lemes da Silva Shawn Leroux Peter J. Lisi Richard A. MacKenzie Amy Marcarelli Frank O. Masese Peter B. McIntyre Brendan G. McKie Adriana O. Medeiros Kristian Meissner Marko Miliša Shailendra Mishra Yo Miyake Ashley H. Moerke

Rivers and streams contribute to global carbon cycling by decomposing immense quantities of terrestrial plant matter. However, decomposition rates are highly variable large-scale patterns drivers this process remain poorly understood. Using a cellulose-based assay reflect the primary constituent detritus, we generated predictive model (81% variance explained) for cellulose across 514 globally distributed streams. A large number variables were important predicting decomposition, highlighting...

10.1126/science.adn1262 article EN Science 2024-05-30

Background The National Family Health Surveys (NFHS) in India apply adult cutoffs of nutritional status for the estimation undernutrition/overweight 15–19 age group. prevalence thinness boys and girls thus estimated is 58.1% 46.8% NFHS-3, 45% 42% NFHS-4 respectively. But WHO recommends using sex-specific reference adolescents. We reanalyzed adolescents 2007 Growth Reference to obtain revised estimates thinness, overweight stunting across states, rural-urban residence, wealth quintiles....

10.1371/journal.pone.0234570 article EN cc-by PLoS ONE 2020-06-22

Vanillin and its derivative, (4-((E)-(4-hydroxy-2-methylphenylimino) methyl)-2-methoxyphenol (MMP) were showed clear inhibition of violacein pyocyanin at sub-MICs indicating a possible quorum quenching effect both the compounds. MMP was able to inhibit biofilm formation in Pseudomonas aeruginosa PAO1 125 μg/mL (p < 0.05), while vanillin 250 0.05) that they act against sensing regulated formation. The confirmed by visualization through fluorescence microscopy followed docking analysis...

10.1080/14786419.2021.1887866 article EN Natural Product Research 2021-02-22

Abstract Background The soil quality and health of the tea plantations are dependent on agriculture management practices, long-term chemical fertilizer use is implicated in decline. Hence, several sustainable practices used to improve maintain quality. Here, this study, changes properties, enzymatic activity, dysbiosis bacterial community composition were compared using three agricultural namely conventional (CA), (SA), transformational (TA) plantation during 2016 2017 period. Soil samples...

10.1186/s40529-021-00314-9 article EN cc-by Botanical studies 2021-05-18

Abstract Halomonas malpeensis strain YU-PRIM-29 T is a yellow pigmented, exopolysaccharide (EPS) producing halophilic bacterium isolated from the coastal region. To understand biosynthesis pathways involved in EPS and pigment production, whole genome analysis was performed. The complete sequencing de novo assembly were carried out using Illumina SPAdes assembler (ver 3.11.1) respectively followed by detailed annotation. consists of 3,607,821 bp distributed 18 contigs with 3337 protein coding...

10.1038/s41598-021-81395-1 article EN cc-by Scientific Reports 2021-01-18

<title>Abstract</title> Arecanut grading is essential for maintaining quality, fair pricing, and efficient trade. Manual methods, dependent on subjective human assessment, are prone to errors, inconsistencies, inefficiencies, particularly in large-scale operations.Automating this process vital improving accuracy scalability. The You Only Look Once (YOLO) deep learning method autonomously evaluates arecanuts by training 2,000 high-resolution photos uniformly categorized into four quality...

10.21203/rs.3.rs-5755373/v1 preprint EN cc-by Research Square (Research Square) 2025-01-06

Objective: This study aimed to identify potential Monoamine oxidase (MAO) inhibitors from Cucurbita pepo address the increasing prevalence of neurological and neuropsychiatric disorders, such as stroke, Alzheimer's, Parkinson's, autism, migraines, depression, by targeting key enzymes involved in neurotransmitter degradation. Methods: The utilised molecular docking pharmacological, physiological, ADMET property analyses screen compounds pepo. Ten promising MAO were shortlisted for further...

10.22159/ijap.2025v17i1.52084 article EN International Journal of Applied Pharmaceutics 2025-01-07

<title>Abstract</title> Effective grading of arecanut is essential for ensuring product quality, maximizing market competitiveness, and satisfying consumer preferences. However, traditional methods are challenging due to variations in size, shape, appearance, resulting subjective inconsistent evaluations. Deep learning can enhance this process by automating using sophisticated algorithms assess both visual non-visual attributes, thereby increasing efficiency, accuracy, consistency. This...

10.21203/rs.3.rs-5841671/v1 preprint EN cc-by Research Square (Research Square) 2025-01-20

<title>Abstract</title> Classifying gender based on Indian names poses a unique challenge due to the nation's immense cultural, linguistic, and regional diversity. Existing methods often struggle address complexities of naming conventions shaped by religious, familial, linguistic influences, resulting in inconsistent inaccurate classifications. To these challenges, this study developed culturally diverse dataset 31.3 lakh male female leveraged advanced machine learning (ML) deep (DL)...

10.21203/rs.3.rs-5897194/v1 preprint EN Research Square (Research Square) 2025-01-29

Epidermal growth factor receptor (EGFR) stands out to being a key player in promoting the progression an invasive, metastatic state prostate cancer (PCa). However, precise molecular mechanisms regulating EGFR relation early detection and recurrence advanced stages are still unclear. Thus, current study, we investigated protein expression of PCa patients mouse tissue by immunohistochemistry western blot technique using cell lines. Relative its associated microRNAs (miRNAs) circular RNAs...

10.7324/japs.2025.225250 article EN Journal of Applied Pharmaceutical Science 2025-01-01

The metabolic disorder diabetes mellitus occurs when there is an inadequate level of insulin or excessive resistance. There has been evidence that this pathogenesis approached via a different strategy. It activates homeostatic glucose and improves peripheral utilization by targeting the PPAR-γ. In regard, present study aims to investigate 2-thioxothiazolidin-4-one derivatives (D1-15) as PPAR-γ regulators computational approach followed evaluation physicochemical properties ADMET profiles....

10.1080/07391102.2025.2506713 article EN Journal of Biomolecular Structure and Dynamics 2025-05-19
Coming Soon ...